Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10620

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,350,567	+		LRK54_RS10615	0.47	-1.5
2,350,567	+		LRK54_RS10615	0.47	-1.3
2,350,567	+		LRK54_RS10615	0.47	-0.9
2,350,567	+		LRK54_RS10615	0.47	-0.0
2,350,567	+		LRK54_RS10615	0.47	-1.3
2,350,568	-		LRK54_RS10615	0.47	-1.2
2,350,614	+		LRK54_RS10615	0.51	-2.2
2,350,614	+		LRK54_RS10615	0.51	+2.1
2,350,614	+		LRK54_RS10615	0.51	-0.9
2,350,615	-		LRK54_RS10615	0.52	-1.7
2,350,615	-		LRK54_RS10615	0.52	-2.2
2,350,615	-		LRK54_RS10615	0.52	-2.0
2,350,615	-		LRK54_RS10615	0.52	-1.4
2,350,615	-		LRK54_RS10615	0.52	+0.7
2,350,656	+		LRK54_RS10615	0.56	-0.6
2,350,656	+		LRK54_RS10615	0.56	+2.4
2,350,656	+		LRK54_RS10615	0.56	-3.2
2,350,657	-		LRK54_RS10615	0.56	-0.3
2,350,657	-		LRK54_RS10615	0.56	+1.1
2,350,657	-		LRK54_RS10615	0.56	-1.2
2,350,657	-		LRK54_RS10615	0.56	-2.3
2,350,657	-		LRK54_RS10615	0.56	+2.1
2,350,657	-		LRK54_RS10615	0.56	-2.5
2,350,657	-		LRK54_RS10615	0.56	-1.4
2,350,657	-		LRK54_RS10615	0.56	+0.3
2,350,669	+		LRK54_RS10615	0.57	+0.9
2,350,734	+		LRK54_RS10615	0.63	-0.3
2,350,735	-		LRK54_RS10615	0.63	+0.1
2,350,735	-		LRK54_RS10615	0.63	+1.6
2,350,735	-		LRK54_RS10615	0.63	-0.0
2,350,735	-		LRK54_RS10615	0.63	-0.7
2,350,760	+		LRK54_RS10615	0.66	+2.1
2,350,760	+		LRK54_RS10615	0.66	-0.9
2,350,760	+		LRK54_RS10615	0.66	-0.6
2,350,760	+		LRK54_RS10615	0.66	-1.7
2,350,760	+		LRK54_RS10615	0.66	-0.3
2,350,761	-		LRK54_RS10615	0.66	+0.2
2,350,860	+		LRK54_RS10615	0.76	-1.0
2,350,861	-		LRK54_RS10615	0.76	-1.4
2,350,861	-		LRK54_RS10615	0.76	-0.6
2,350,887	+		LRK54_RS10615	0.78	-0.2
2,350,887	+		LRK54_RS10615	0.78	-0.2
2,350,887	+		LRK54_RS10615	0.78	-2.0
2,350,887	+		LRK54_RS10615	0.78	+0.1
2,350,887	+		LRK54_RS10615	0.78	-1.4
2,350,887	+		LRK54_RS10615	0.78	-0.0
2,350,887	+		LRK54_RS10615	0.78	-1.4
2,350,887	+		LRK54_RS10615	0.78	-0.8
2,350,887	+		LRK54_RS10615	0.78	+1.1
2,350,887	+		LRK54_RS10615	0.78	-1.1
2,350,887	+		LRK54_RS10615	0.78	-0.5
2,350,887	+		LRK54_RS10615	0.78	+0.2
2,350,887	+		LRK54_RS10615	0.78	-1.5
2,350,887	+		LRK54_RS10615	0.78	-1.0
2,350,887	+		LRK54_RS10615	0.78	+0.8
2,350,887	+		LRK54_RS10615	0.78	+1.6
2,350,887	+		LRK54_RS10615	0.78	-2.0
2,350,887	+		LRK54_RS10615	0.78	-0.7
2,350,887	+		LRK54_RS10615	0.78	+0.1
2,350,887	+		LRK54_RS10615	0.78	-0.7
2,350,887	+		LRK54_RS10615	0.78	-0.9
2,350,887	+		LRK54_RS10615	0.78	+0.4
2,350,887	+		LRK54_RS10615	0.78	-2.1
2,350,887	+		LRK54_RS10615	0.78	+3.8
2,350,887	+		LRK54_RS10615	0.78	-1.2
2,350,887	+		LRK54_RS10615	0.78	+0.8
2,350,887	+		LRK54_RS10615	0.78	-2.2
2,350,887	+		LRK54_RS10615	0.78	-1.7
2,350,887	+		LRK54_RS10615	0.78	+0.3
2,350,887	+		LRK54_RS10615	0.78	+0.1
2,350,887	+		LRK54_RS10615	0.78	-0.4
2,350,887	+		LRK54_RS10615	0.78	-0.4
2,350,887	+		LRK54_RS10615	0.78	-0.3
2,350,887	+		LRK54_RS10615	0.78	+0.7
2,350,887	+		LRK54_RS10615	0.78	+0.4
2,350,887	+		LRK54_RS10615	0.78	+2.2
2,350,887	+		LRK54_RS10615	0.78	-1.2
2,350,887	+		LRK54_RS10615	0.78	-0.1
2,350,887	+		LRK54_RS10615	0.78	+0.1
2,350,887	+		LRK54_RS10615	0.78	-1.4
2,350,887	+		LRK54_RS10615	0.78	-1.0
2,350,887	+		LRK54_RS10615	0.78	-1.7
2,350,888	-		LRK54_RS10615	0.78	+0.6
2,350,888	-		LRK54_RS10615	0.78	+0.3
2,350,888	-		LRK54_RS10615	0.78	-0.9
2,350,888	-		LRK54_RS10615	0.78	-0.0
2,350,888	-		LRK54_RS10615	0.78	-0.5
2,350,888	-		LRK54_RS10615	0.78	-0.0
2,350,888	-		LRK54_RS10615	0.78	-2.3
2,350,888	-		LRK54_RS10615	0.78	+1.6
2,350,888	-		LRK54_RS10615	0.78	-1.5
2,350,888	-		LRK54_RS10615	0.78	+0.9
2,350,888	-		LRK54_RS10615	0.78	+3.1
2,350,888	-		LRK54_RS10615	0.78	+1.1
2,350,888	-		LRK54_RS10615	0.78	+0.1
2,350,888	-		LRK54_RS10615	0.78	-1.1
2,350,888	-		LRK54_RS10615	0.78	+1.3
2,350,888	-		LRK54_RS10615	0.78	-0.2
2,350,888	-		LRK54_RS10615	0.78	-1.9
2,350,888	-		LRK54_RS10615	0.78	-1.4
2,350,888	-		LRK54_RS10615	0.78	-1.1
2,350,888	-		LRK54_RS10615	0.78	-1.1
2,350,888	-		LRK54_RS10615	0.78	-0.3
2,350,888	-		LRK54_RS10615	0.78	+0.3
2,350,888	-		LRK54_RS10615	0.78	+0.8
2,350,888	-		LRK54_RS10615	0.78	-2.2
2,350,888	-		LRK54_RS10615	0.78	-0.6
2,350,888	-		LRK54_RS10615	0.78	+0.2
2,350,888	-		LRK54_RS10615	0.78	-0.4
2,350,888	-		LRK54_RS10615	0.78	-0.2
2,351,021	+				+2.1
2,351,021	+				-1.4
2,351,021	+				+0.3
2,351,021	+				-0.3
2,351,021	+				-0.7
2,351,021	+				+0.3
2,351,021	+				+0.9
2,351,021	+				+1.6
2,351,021	+				-1.3
2,351,021	+				-1.8
2,351,021	+				+0.3
2,351,021	+				-0.8
2,351,021	+				+0.8
2,351,021	+				-0.3
2,351,021	+				+0.7
2,351,021	+				-0.9
2,351,021	+				-0.8
2,351,021	+				-0.7
2,351,021	+				-0.6
2,351,021	+				-1.7
2,351,021	+				-1.0
2,351,021	+				-0.9
2,351,021	+				+1.8
2,351,021	+				-0.3
2,351,021	+				-1.1
2,351,022	-				-0.8
2,351,022	-				-2.0
2,351,022	-				-2.3
2,351,022	-				-2.3
2,351,022	-				+1.9
2,351,022	-				+0.3
2,351,022	-				-1.2
2,351,022	-				-0.4
2,351,022	-				+0.6
2,351,022	-				-1.4
2,351,022	-				-1.1
2,351,022	-				-0.3
2,351,022	-				+1.6
2,351,022	-				-2.3
2,351,022	-				+1.1
2,351,022	-				-0.2
2,351,022	-				-1.1
2,351,022	-				-1.3
2,351,022	-				-1.7
2,351,022	-				-1.6
2,351,022	-				+0.4
2,351,022	-				-0.0
2,351,058	-				+1.1
2,351,075	-				-0.0
2,351,120	+				-1.4
2,351,123	+				-0.2
2,351,123	+				-0.3
2,351,123	+				+1.7
2,351,123	+				-1.1
2,351,123	+				+1.2
2,351,123	+				-2.2
2,351,124	-				-2.3
2,351,124	-				-0.6
2,351,124	-				+1.1
2,351,124	-				-2.2
2,351,124	-				+0.8
2,351,124	-				+0.3
2,351,124	-				-0.8
2,351,124	-				+4.1
2,351,124	-				+0.1
2,351,124	-				-0.6
2,351,137	+				+0.4
2,351,137	+				-1.4
2,351,138	-				-1.3
2,351,138	-				-1.7
2,351,138	-				-0.0
2,351,138	-				+0.6
2,351,140	+				+2.1
2,351,140	+				-2.0
2,351,140	+				+1.6
2,351,140	+				+2.1
2,351,140	+				-1.5
2,351,141	-				+1.1
2,351,141	-				+1.8
2,351,142	-				-1.2
2,351,157	+				-0.3
2,351,157	+				-0.6
2,351,158	-				-1.0
2,351,169	+				-0.3
2,351,170	-				-1.5
2,351,182	+				+0.8
2,351,254	+				+0.2
2,351,254	+				-2.2
2,351,254	+				-1.7
2,351,254	+				+2.7
2,351,254	+				-1.1
2,351,254	+				+1.7
2,351,254	+				-1.3
2,351,254	+				-0.4
2,351,254	+				+1.1
2,351,254	+				-0.2
2,351,254	+				-0.3
2,351,255	-				-2.1
2,351,255	-				-0.3
2,351,255	-				+1.9
2,351,255	-				-0.0
2,351,255	-				-2.0
2,351,255	-				-0.2
2,351,255	-				-2.6
2,351,255	-				+0.4
2,351,255	-				-0.1
2,351,540	+				-2.0
2,351,540	+				-1.1
2,351,540	+				-0.4
2,351,540	+				+0.0
2,351,540	+				+1.1
2,351,540	+				-1.1
2,351,541	-				-1.0
2,351,541	-				+0.9
2,351,541	-				-1.6
2,351,541	-				+2.1
2,351,541	-				+0.3
2,351,650	+		LRK54_RS10620	0.24	-1.4
2,351,650	+		LRK54_RS10620	0.24	-1.4
2,351,712	+		LRK54_RS10620	0.35	-1.4
2,351,712	+		LRK54_RS10620	0.35	-1.9
2,352,521	+				-1.3
2,352,521	+				-0.9
2,352,522	-				+1.1
2,352,532	+				-0.7
2,352,532	+				-1.5
2,352,532	+				-1.0
2,352,532	+				+0.6
2,352,532	+				-2.0
2,352,532	+				-0.4
2,352,532	+				-1.6
2,352,532	+				-0.8
2,352,533	-				-2.2
2,352,533	-				-0.2
2,352,533	-				+0.3
2,352,533	-				-0.0
2,352,533	-				+0.1
2,352,533	-				-0.8
2,352,533	-				+0.2
2,352,550	+				-0.2
2,352,550	+				-0.8
2,352,550	+				-1.6
2,352,550	+				-0.8
2,352,550	+				+0.3
2,352,550	+				+1.1
2,352,550	+				-1.4
2,352,550	+				-0.2
2,352,551	-				-1.1
2,352,551	-				-2.0
2,352,551	-				-1.3
2,352,551	-				-1.2
2,352,551	-				-0.4
2,352,551	-				+0.8
2,352,551	-				-0.7
2,352,551	-				-1.1
2,352,551	-				-2.5
2,352,551	-				+1.1
2,352,788	+		LRK54_RS10630	0.24	+0.3
2,352,788	+		LRK54_RS10630	0.24	+2.0
2,352,788	+		LRK54_RS10630	0.24	+0.6
2,352,788	+		LRK54_RS10630	0.24	+1.1
2,352,788	+		LRK54_RS10630	0.24	-1.0
2,352,788	+		LRK54_RS10630	0.24	+1.4
2,352,788	+		LRK54_RS10630	0.24	-0.9
2,352,788	+		LRK54_RS10630	0.24	+0.3
2,352,789	-		LRK54_RS10630	0.24	-1.2
2,352,789	-		LRK54_RS10630	0.24	-0.8
2,352,789	-		LRK54_RS10630	0.24	+0.9
2,352,789	-		LRK54_RS10630	0.24	-0.6
2,352,789	-		LRK54_RS10630	0.24	-0.2
2,352,789	-		LRK54_RS10630	0.24	-0.3
2,352,789	-		LRK54_RS10630	0.24	-0.6
2,352,789	-		LRK54_RS10630	0.24	+1.1
2,352,789	-		LRK54_RS10630	0.24	-1.6
2,352,789	-		LRK54_RS10630	0.24	-2.6
2,352,789	-		LRK54_RS10630	0.24	+0.5
2,352,789	-		LRK54_RS10630	0.24	-1.0
2,352,789	-		LRK54_RS10630	0.24	-0.6
2,352,846	+		LRK54_RS10630	0.32	+2.4
2,352,847	-		LRK54_RS10630	0.32	-0.0
2,352,847	-				+1.6
2,352,847	-		LRK54_RS10630	0.32	-0.8
2,352,911	+		LRK54_RS10630	0.41	+0.4
2,352,911	+		LRK54_RS10630	0.41	-1.4
2,352,912	-		LRK54_RS10630	0.41	+2.8
2,353,025	+		LRK54_RS10630	0.57	-1.3
2,353,025	+		LRK54_RS10630	0.57	-2.0
2,353,076	+		LRK54_RS10630	0.64	+2.1
2,353,076	+		LRK54_RS10630	0.64	-2.2
2,353,076	+		LRK54_RS10630	0.64	-1.0
2,353,076	+		LRK54_RS10630	0.64	-0.9
2,353,076	+		LRK54_RS10630	0.64	+1.4
2,353,076	+		LRK54_RS10630	0.64	-0.5
2,353,076	+		LRK54_RS10630	0.64	-0.7
2,353,076	+		LRK54_RS10630	0.64	-0.6
2,353,076	+		LRK54_RS10630	0.64	-1.2
2,353,076	+		LRK54_RS10630	0.64	-0.4
2,353,076	+		LRK54_RS10630	0.64	+0.8
2,353,076	+		LRK54_RS10630	0.64	-1.3
2,353,076	+		LRK54_RS10630	0.64	+0.8
2,353,077	-		LRK54_RS10630	0.64	-0.4
2,353,077	-		LRK54_RS10630	0.64	-0.7
2,353,077	-		LRK54_RS10630	0.64	-0.1
2,353,077	-		LRK54_RS10630	0.64	-0.0
2,353,077	-		LRK54_RS10630	0.64	-1.9
2,353,077	-		LRK54_RS10630	0.64	-0.5
2,353,077	-		LRK54_RS10630	0.64	-2.0
2,353,077	-		LRK54_RS10630	0.64	+0.6
2,353,077	-		LRK54_RS10630	0.64	-1.2
2,353,077	-		LRK54_RS10630	0.64	-0.9