Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10125

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,224,688	+		LRK54_RS10120	0.51	-0.5
2,224,688	+		LRK54_RS10120	0.51	-1.1
2,224,688	+		LRK54_RS10120	0.51	-0.4
2,224,688	+		LRK54_RS10120	0.51	+1.5
2,224,688	+		LRK54_RS10120	0.51	+0.6
2,224,688	+		LRK54_RS10120	0.51	-0.4
2,224,688	+		LRK54_RS10120	0.51	+0.3
2,224,688	+		LRK54_RS10120	0.51	-0.6
2,224,688	+		LRK54_RS10120	0.51	+1.2
2,224,688	+		LRK54_RS10120	0.51	+1.4
2,224,688	+		LRK54_RS10120	0.51	-1.5
2,224,688	+		LRK54_RS10120	0.51	-0.8
2,224,688	+		LRK54_RS10120	0.51	-0.6
2,224,688	+		LRK54_RS10120	0.51	+0.4
2,224,688	+		LRK54_RS10120	0.51	-1.4
2,224,688	+		LRK54_RS10120	0.51	-0.2
2,224,688	+		LRK54_RS10120	0.51	-0.7
2,224,688	+		LRK54_RS10120	0.51	-0.3
2,224,689	-		LRK54_RS10120	0.51	+0.7
2,224,689	-		LRK54_RS10120	0.51	-1.0
2,224,689	-		LRK54_RS10120	0.51	-1.0
2,224,689	-		LRK54_RS10120	0.51	+1.2
2,224,689	-		LRK54_RS10120	0.51	-0.1
2,224,689	-		LRK54_RS10120	0.51	-0.9
2,224,689	-		LRK54_RS10120	0.51	-0.5
2,224,689	-		LRK54_RS10120	0.51	+0.2
2,224,689	-		LRK54_RS10120	0.51	+0.6
2,224,689	-		LRK54_RS10120	0.51	+2.2
2,224,689	-		LRK54_RS10120	0.51	+0.4
2,224,689	-		LRK54_RS10120	0.51	-0.7
2,224,689	-		LRK54_RS10120	0.51	-1.3
2,224,689	-		LRK54_RS10120	0.51	+0.4
2,224,689	-		LRK54_RS10120	0.51	-0.4
2,224,689	-		LRK54_RS10120	0.51	-1.6
2,224,689	-		LRK54_RS10120	0.51	-0.2
2,224,689	-		LRK54_RS10120	0.51	+0.0
2,224,689	-		LRK54_RS10120	0.51	+0.8
2,224,689	-		LRK54_RS10120	0.51	+0.9
2,224,689	-		LRK54_RS10120	0.51	+0.2
2,224,689	-		LRK54_RS10120	0.51	-0.3
2,224,689	-		LRK54_RS10120	0.51	+0.2
2,224,689	-		LRK54_RS10120	0.51	-0.1
2,224,724	+		LRK54_RS10120	0.53	-0.7
2,224,724	+		LRK54_RS10120	0.53	+1.3
2,224,724	+		LRK54_RS10120	0.53	+1.2
2,224,763	+		LRK54_RS10120	0.55	-0.9
2,224,763	+		LRK54_RS10120	0.55	+0.2
2,224,763	+		LRK54_RS10120	0.55	-0.4
2,224,763	+		LRK54_RS10120	0.55	-0.9
2,224,763	+		LRK54_RS10120	0.55	-1.0
2,224,763	+		LRK54_RS10120	0.55	-0.1
2,224,763	+		LRK54_RS10120	0.55	+0.1
2,224,763	+		LRK54_RS10120	0.55	+1.6
2,224,763	+		LRK54_RS10120	0.55	-0.8
2,224,763	+		LRK54_RS10120	0.55	-1.5
2,224,763	+		LRK54_RS10120	0.55	-0.4
2,224,764	-		LRK54_RS10120	0.56	-1.1
2,224,764	-		LRK54_RS10120	0.56	+0.3
2,224,764	-		LRK54_RS10120	0.56	-0.4
2,224,764	-		LRK54_RS10120	0.56	-0.3
2,224,764	-		LRK54_RS10120	0.56	+0.4
2,224,764	-		LRK54_RS10120	0.56	-1.3
2,224,764	-		LRK54_RS10120	0.56	-0.7
2,224,764	-		LRK54_RS10120	0.56	-1.3
2,224,764	-		LRK54_RS10120	0.56	+0.0
2,224,764	-		LRK54_RS10120	0.56	-0.7
2,224,764	-		LRK54_RS10120	0.56	+0.2
2,224,922	+		LRK54_RS10120	0.65	+0.2
2,224,922	+		LRK54_RS10120	0.65	+0.7
2,224,922	+		LRK54_RS10120	0.65	+2.3
2,224,922	+		LRK54_RS10120	0.65	-0.7
2,224,923	-		LRK54_RS10120	0.65	+1.6
2,224,923	-		LRK54_RS10120	0.65	+0.2
2,224,923	-		LRK54_RS10120	0.65	+0.6
2,224,923	-		LRK54_RS10120	0.65	+0.4
2,225,048	+		LRK54_RS10120	0.72	-0.1
2,225,048	+		LRK54_RS10120	0.72	+0.8
2,225,048	+		LRK54_RS10120	0.72	-0.1
2,225,048	+		LRK54_RS10120	0.72	-0.6
2,225,048	+		LRK54_RS10120	0.72	+1.6
2,225,048	+		LRK54_RS10120	0.72	+0.0
2,225,048	+		LRK54_RS10120	0.72	-0.3
2,225,048	+		LRK54_RS10120	0.72	-0.3
2,225,048	+		LRK54_RS10120	0.72	-0.0
2,225,048	+		LRK54_RS10120	0.72	-1.3
2,225,048	+		LRK54_RS10120	0.72	-1.5
2,225,048	+		LRK54_RS10120	0.72	+1.4
2,225,048	+		LRK54_RS10120	0.72	-0.3
2,225,048	+		LRK54_RS10120	0.72	-1.2
2,225,048	+		LRK54_RS10120	0.72	-2.4
2,225,049	-		LRK54_RS10120	0.72	+1.0
2,225,049	-		LRK54_RS10120	0.72	+0.4
2,225,049	-		LRK54_RS10120	0.72	+0.9
2,225,049	-		LRK54_RS10120	0.72	+1.2
2,225,049	-		LRK54_RS10120	0.72	+0.1
2,225,049	-		LRK54_RS10120	0.72	+0.2
2,225,049	-		LRK54_RS10120	0.72	-0.4
2,225,049	-		LRK54_RS10120	0.72	-1.3
2,225,049	-		LRK54_RS10120	0.72	-0.6
2,225,049	-		LRK54_RS10120	0.72	-0.3
2,225,049	-		LRK54_RS10120	0.72	+0.9
2,225,049	-		LRK54_RS10120	0.72	-2.5
2,225,049	-		LRK54_RS10120	0.72	+0.3
2,225,108	+		LRK54_RS10120	0.75	+0.9
2,225,108	+		LRK54_RS10120	0.75	+0.4
2,225,108	+		LRK54_RS10120	0.75	+3.5
2,225,108	+		LRK54_RS10120	0.75	-0.4
2,225,108	+		LRK54_RS10120	0.75	+0.7
2,225,108	+		LRK54_RS10120	0.75	-1.1
2,225,108	+		LRK54_RS10120	0.75	+0.7
2,225,108	+		LRK54_RS10120	0.75	+0.1
2,225,108	+		LRK54_RS10120	0.75	+2.2
2,225,109	-		LRK54_RS10120	0.76	-1.5
2,225,109	-		LRK54_RS10120	0.76	-1.6
2,225,109	-		LRK54_RS10120	0.76	-0.8
2,225,109	-		LRK54_RS10120	0.76	+0.3
2,225,109	-		LRK54_RS10120	0.76	-0.5
2,225,109	-		LRK54_RS10120	0.76	-1.0
2,225,109	-		LRK54_RS10120	0.76	+1.8
2,225,109	-		LRK54_RS10120	0.76	+2.4
2,225,109	-		LRK54_RS10120	0.76	+0.0
2,225,109	-		LRK54_RS10120	0.76	+0.1
2,225,109	-		LRK54_RS10120	0.76	-1.9
2,225,109	-		LRK54_RS10120	0.76	-1.8
2,225,109	-		LRK54_RS10120	0.76	-0.1
2,225,109	-		LRK54_RS10120	0.76	+1.4
2,225,189	+		LRK54_RS10120	0.80	+0.5
2,225,189	+		LRK54_RS10120	0.80	-0.5
2,225,189	+		LRK54_RS10120	0.80	-1.6
2,225,189	+		LRK54_RS10120	0.80	+0.7
2,225,189	+		LRK54_RS10120	0.80	-0.8
2,225,189	+		LRK54_RS10120	0.80	+3.2
2,225,189	+		LRK54_RS10120	0.80	-0.5
2,225,189	+		LRK54_RS10120	0.80	-0.7
2,225,190	-		LRK54_RS10120	0.80	+0.9
2,225,190	-		LRK54_RS10120	0.80	-1.1
2,225,190	-		LRK54_RS10120	0.80	-0.5
2,225,190	-		LRK54_RS10120	0.80	+0.9
2,225,190	-		LRK54_RS10120	0.80	+0.9
2,225,264	+		LRK54_RS10120	0.85	+1.4
2,225,264	+		LRK54_RS10120	0.85	-1.5
2,225,264	+		LRK54_RS10120	0.85	+0.7
2,225,264	+		LRK54_RS10120	0.85	+1.2
2,225,264	+		LRK54_RS10120	0.85	+0.7
2,225,264	+		LRK54_RS10120	0.85	+0.2
2,225,264	+		LRK54_RS10120	0.85	+1.2
2,225,264	+		LRK54_RS10120	0.85	-0.9
2,225,264	+		LRK54_RS10120	0.85	+1.8
2,225,264	+		LRK54_RS10120	0.85	+0.2
2,225,264	+		LRK54_RS10120	0.85	+0.5
2,225,264	+		LRK54_RS10120	0.85	+0.1
2,225,264	+		LRK54_RS10120	0.85	-0.2
2,225,264	+		LRK54_RS10120	0.85	+0.0
2,225,264	+		LRK54_RS10120	0.85	+0.6
2,225,264	+		LRK54_RS10120	0.85	+0.2
2,225,264	+		LRK54_RS10120	0.85	+0.1
2,225,264	+		LRK54_RS10120	0.85	+0.4
2,225,264	+		LRK54_RS10120	0.85	+1.6
2,225,264	+		LRK54_RS10120	0.85	-0.1
2,225,264	+		LRK54_RS10120	0.85	-0.2
2,225,264	+		LRK54_RS10120	0.85	+0.4
2,225,264	+		LRK54_RS10120	0.85	-0.4
2,225,264	+		LRK54_RS10120	0.85	+1.2
2,225,265	-		LRK54_RS10120	0.85	+0.2
2,225,265	-		LRK54_RS10120	0.85	+0.9
2,225,265	-		LRK54_RS10120	0.85	-0.1
2,225,265	-		LRK54_RS10120	0.85	-0.4
2,225,265	-		LRK54_RS10120	0.85	-0.1
2,225,265	-		LRK54_RS10120	0.85	+0.3
2,225,265	-		LRK54_RS10120	0.85	-0.9
2,225,265	-		LRK54_RS10120	0.85	-1.5
2,225,265	-		LRK54_RS10120	0.85	-0.8
2,225,265	-		LRK54_RS10120	0.85	-0.4
2,225,265	-		LRK54_RS10120	0.85	-0.4
2,225,265	-		LRK54_RS10120	0.85	-0.4
2,225,265	-		LRK54_RS10120	0.85	+0.5
2,225,265	-		LRK54_RS10120	0.85	+0.8
2,225,265	-		LRK54_RS10120	0.85	+2.2
2,225,265	-		LRK54_RS10120	0.85	-1.0
2,225,265	-		LRK54_RS10120	0.85	-0.1
2,225,265	-		LRK54_RS10120	0.85	+0.3
2,225,265	-		LRK54_RS10120	0.85	+0.1
2,225,267	+		LRK54_RS10120	0.85	-3.0
2,225,267	+		LRK54_RS10120	0.85	-0.9
2,225,267	+		LRK54_RS10120	0.85	+0.6
2,225,267	+		LRK54_RS10120	0.85	-1.7
2,225,267	+		LRK54_RS10120	0.85	+0.5
2,225,267	+		LRK54_RS10120	0.85	+0.6
2,225,267	+		LRK54_RS10120	0.85	+1.4
2,225,267	+		LRK54_RS10120	0.85	-1.3
2,225,267	+		LRK54_RS10120	0.85	+0.9
2,225,267	+		LRK54_RS10120	0.85	-1.3
2,225,267	+		LRK54_RS10120	0.85	+0.8
2,225,267	+		LRK54_RS10120	0.85	+1.6
2,225,267	+		LRK54_RS10120	0.85	-1.5
2,225,267	+		LRK54_RS10120	0.85	-0.6
2,225,267	+		LRK54_RS10120	0.85	+1.6
2,225,267	+		LRK54_RS10120	0.85	-1.3
2,225,267	+		LRK54_RS10120	0.85	+0.2
2,225,267	+		LRK54_RS10120	0.85	+1.3
2,225,267	+		LRK54_RS10120	0.85	+0.2
2,225,267	+		LRK54_RS10120	0.85	-1.6
2,225,267	+		LRK54_RS10120	0.85	+0.5
2,225,267	+		LRK54_RS10120	0.85	+0.2
2,225,267	+		LRK54_RS10120	0.85	-1.3
2,225,267	+		LRK54_RS10120	0.85	-1.2
2,225,268	-		LRK54_RS10120	0.85	+1.4
2,225,268	-		LRK54_RS10120	0.85	+0.6
2,225,268	-		LRK54_RS10120	0.85	-0.6
2,225,268	-		LRK54_RS10120	0.85	+2.1
2,225,268	-		LRK54_RS10120	0.85	-0.6
2,225,268	-		LRK54_RS10120	0.85	+0.9
2,225,268	-		LRK54_RS10120	0.85	+0.0
2,225,268	-		LRK54_RS10120	0.85	-1.9
2,225,268	-		LRK54_RS10120	0.85	+0.0
2,225,268	-		LRK54_RS10120	0.85	-0.1
2,225,268	-		LRK54_RS10120	0.85	-0.7
2,225,268	-		LRK54_RS10120	0.85	-0.9
2,225,268	-		LRK54_RS10120	0.85	-0.2
2,225,268	-		LRK54_RS10120	0.85	+1.2
2,225,268	-		LRK54_RS10120	0.85	-0.8
2,225,268	-		LRK54_RS10120	0.85	+1.9
2,225,268	-		LRK54_RS10120	0.85	+0.1
2,225,268	-		LRK54_RS10120	0.85	-0.9
2,225,268	-		LRK54_RS10120	0.85	-0.0
2,225,268	-		LRK54_RS10120	0.85	+1.2
2,225,268	-		LRK54_RS10120	0.85	-0.8
2,225,268	-		LRK54_RS10120	0.85	-1.6
2,225,268	-		LRK54_RS10120	0.85	+2.2
2,225,268	-		LRK54_RS10120	0.85	+0.0
2,225,268	-		LRK54_RS10120	0.85	+1.9
2,225,268	-		LRK54_RS10120	0.85	-0.1
2,225,312	+		LRK54_RS10120	0.87	-1.7
2,225,313	-		LRK54_RS10120	0.87	+1.4
2,225,573	+				-1.8
2,225,573	+				-1.4
2,225,573	+				-1.9
2,225,573	+				-2.0
2,225,573	+				-0.8
2,225,573	+				-0.4
2,225,574	-				-0.0
2,225,574	-				+1.6
2,225,574	-				-1.5
2,225,574	-				+0.2
2,225,587	+				-1.9
2,225,587	+				-2.8
2,225,587	+				-0.4
2,225,587	+				-0.7
2,225,587	+				+1.6
2,225,587	+				+0.9
2,225,587	+				-0.8
2,225,587	+				-0.1
2,225,588	-				-0.1
2,225,588	-				-0.4
2,225,588	-				-0.8
2,225,588	-				-1.5
2,225,588	-				-0.9
2,225,588	-				-0.1
2,225,588	-				-0.1
2,225,588	-				-0.2
2,225,588	-				+1.2
2,225,588	-				-0.2
2,225,588	-				+1.6
2,225,588	-				+0.0
2,225,588	-				-0.3
2,225,588	-				-0.3
2,225,588	-				-0.3
2,225,588	-				-0.1
2,225,588	-				-2.9
2,225,588	-				+0.6
2,225,589	-				+0.3
2,225,633	+				-1.9
2,225,633	+				-2.8
2,225,633	+				+0.7
2,225,633	+				-1.2
2,225,633	+				-2.4
2,225,633	+				-1.4
2,225,633	+				-1.7
2,225,633	+				-1.3
2,225,633	+				-1.4
2,225,633	+				-0.3
2,225,634	-				+0.2
2,225,634	-				+1.2
2,225,634	-				+0.2
2,225,634	-				+0.7
2,225,634	-				-2.2
2,225,634	-				-1.8
2,225,634	-				-0.4
2,225,634	-				-2.0
2,225,636	+				-1.3
2,225,636	+				-0.9
2,225,636	+				-0.5
2,225,636	+				-0.4
2,225,636	+				+1.2
2,225,636	+				+0.9
2,225,636	+				-1.9
2,225,636	+				+0.9
2,225,636	+				+1.6
2,225,636	+				+0.6
2,225,636	+				-1.2
2,225,636	+				+0.4
2,225,636	+				-1.4
2,225,636	+				+1.6
2,225,636	+				-1.9
2,225,636	+				+0.9
2,225,636	+				-0.1
2,225,636	+				-0.0
2,225,636	+				-0.6
2,225,636	+				-0.3
2,225,636	+				-1.3
2,225,636	+				-1.5
2,225,636	+				-1.0
2,225,636	+				-0.9
2,225,636	+				-1.3
2,225,636	+				-0.8
2,225,636	+				-0.4
2,225,636	+				-2.3
2,225,636	+				-1.1
2,225,636	+				+0.4
2,225,636	+				-3.4
2,225,636	+				-0.9
2,225,636	+				-1.7
2,225,636	+				+1.2
2,225,636	+				-1.6
2,225,636	+				-1.5
2,225,636	+				-1.8
2,225,636	+				-0.4
2,225,636	+				-0.8
2,225,637	-				+0.4
2,225,637	-				+0.9
2,225,637	-				+0.4
2,225,637	-				-0.4
2,225,637	-				-1.3
2,225,637	-				+3.2
2,225,637	-				-1.2
2,225,637	-				+0.9
2,225,637	-				-0.9
2,225,637	-				-1.8
2,225,637	-				-1.5
2,225,637	-				-0.6
2,225,637	-				-0.8
2,225,637	-				-1.1
2,225,637	-				+0.9
2,225,637	-				-2.8
2,225,637	-				-1.9
2,225,637	-				-0.3
2,225,637	-				+1.2
2,225,637	-				-0.9
2,225,637	-				-0.8
2,225,637	-				+2.2
2,225,637	-				-0.1
2,225,637	-				-1.3
2,225,637	-				-1.9
2,225,637	-				-1.6
2,225,637	-				-2.0
2,225,637	-				+2.2
2,225,637	-				-1.7
2,225,637	-				-2.5
2,225,637	-				+0.6
2,225,637	-				-0.4
2,225,637	-				+0.6
2,225,637	-				+1.2
2,225,637	-				-3.0
2,225,637	-				+0.6
2,225,637	-				-2.1
2,225,637	-				+0.6
2,225,637	-				+0.4
2,225,637	-				-0.6
2,225,637	-				-0.1
2,225,637	-				-1.5
2,225,637	-				-1.1
2,225,637	-				+0.9
2,225,637	-				-0.3
2,225,637	-				+0.4
2,225,798	+		LRK54_RS10125	0.15	+0.0
2,225,798	+		LRK54_RS10125	0.15	-2.9
2,225,798	+		LRK54_RS10125	0.15	+2.6
2,225,798	+		LRK54_RS10125	0.15	+1.6
2,225,798	+		LRK54_RS10125	0.15	-1.3
2,225,798	+		LRK54_RS10125	0.15	-0.1
2,225,798	+		LRK54_RS10125	0.15	-0.0
2,225,798	+		LRK54_RS10125	0.15	-1.9
2,225,798	+		LRK54_RS10125	0.15	+0.2
2,225,798	+		LRK54_RS10125	0.15	-2.3
2,225,798	+		LRK54_RS10125	0.15	-2.7
2,225,798	+		LRK54_RS10125	0.15	-1.8
2,225,799	-		LRK54_RS10125	0.15	+0.9
2,225,799	-		LRK54_RS10125	0.15	-3.0
2,225,799	-		LRK54_RS10125	0.15	-1.2
2,225,799	-		LRK54_RS10125	0.15	-1.8
2,225,799	-		LRK54_RS10125	0.15	+1.2
2,225,799	-		LRK54_RS10125	0.15	+1.2
2,225,799	-		LRK54_RS10125	0.15	-0.6
2,225,799	-		LRK54_RS10125	0.15	-2.4
2,225,799	-		LRK54_RS10125	0.15	-1.3
2,225,799	-		LRK54_RS10125	0.15	+0.0
2,225,799	-		LRK54_RS10125	0.15	-0.7
2,225,799	-		LRK54_RS10125	0.15	-0.6
2,225,799	-		LRK54_RS10125	0.15	-2.0
2,226,320	+		LRK54_RS10125	0.55	-3.0
2,226,320	+		LRK54_RS10125	0.55	-1.3
2,226,320	+		LRK54_RS10125	0.55	+0.9
2,226,321	-		LRK54_RS10125	0.55	+0.9
2,226,321	-		LRK54_RS10125	0.55	+0.6
2,226,321	-		LRK54_RS10125	0.55	+0.0
2,226,321	-		LRK54_RS10125	0.55	-1.1
2,226,321	-		LRK54_RS10125	0.55	-1.2
2,226,321	-		LRK54_RS10125	0.55	-2.3
2,226,321	-		LRK54_RS10125	0.55	+0.9
2,226,626	+		LRK54_RS10125	0.78	+2.2
2,226,626	+		LRK54_RS10125	0.78	-2.3
2,226,626	+		LRK54_RS10125	0.78	+0.6
2,226,626	+		LRK54_RS10125	0.78	-1.7
2,226,626	+		LRK54_RS10125	0.78	-1.6
2,226,626	+		LRK54_RS10125	0.78	-0.8
2,226,627	-		LRK54_RS10125	0.78	+1.3
2,226,627	-		LRK54_RS10125	0.78	-1.4
2,226,627	-		LRK54_RS10125	0.78	+0.6
2,226,627	-		LRK54_RS10125	0.78	+0.9
2,226,627	-		LRK54_RS10125	0.78	-1.1