Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10050

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,209,870	+		LRK54_RS10045	0.59	-1.5
2,209,870	+		LRK54_RS10045	0.59	-0.4
2,209,870	+		LRK54_RS10045	0.59	+0.9
2,209,871	-		LRK54_RS10045	0.59	-1.6
2,209,871	-		LRK54_RS10045	0.59	+0.4
2,209,871	-		LRK54_RS10045	0.59	-0.1
2,209,871	-		LRK54_RS10045	0.59	-1.1
2,209,871	-		LRK54_RS10045	0.59	+0.0
2,209,871	-		LRK54_RS10045	0.59	-1.2
2,209,871	-		LRK54_RS10045	0.59	-1.3
2,209,871	-		LRK54_RS10045	0.59	-0.1
2,209,894	+		LRK54_RS10045	0.61	-1.0
2,209,894	+		LRK54_RS10045	0.61	-1.6
2,209,894	+		LRK54_RS10045	0.61	+1.6
2,209,894	+		LRK54_RS10045	0.61	+0.1
2,209,895	-		LRK54_RS10045	0.61	-0.8
2,209,895	-		LRK54_RS10045	0.61	+0.2
2,209,895	-		LRK54_RS10045	0.61	-0.2
2,209,895	-		LRK54_RS10045	0.61	+1.4
2,209,895	-		LRK54_RS10045	0.61	-1.4
2,209,895	-		LRK54_RS10045	0.61	+0.9
2,209,895	-		LRK54_RS10045	0.61	+0.3
2,210,159	+		LRK54_RS10045	0.82	+0.5
2,210,159	+		LRK54_RS10045	0.82	-0.4
2,210,159	+		LRK54_RS10045	0.82	-0.6
2,210,159	+		LRK54_RS10045	0.82	-0.1
2,210,160	-		LRK54_RS10045	0.82	-0.7
2,210,160	-		LRK54_RS10045	0.82	+0.3
2,210,305	+				+0.7
2,210,305	+				+1.9
2,210,306	-				+2.2
2,210,306	-				+0.0
2,210,306	-				-1.3
2,210,306	-				-2.6
2,210,634	+		LRK54_RS10050	0.29	-2.1
2,210,634	+		LRK54_RS10050	0.29	+3.2
2,210,634	+		LRK54_RS10050	0.29	+0.2
2,210,634	+		LRK54_RS10050	0.29	+0.6
2,210,634	+		LRK54_RS10050	0.29	+1.2
2,210,634	+		LRK54_RS10050	0.29	+1.6
2,210,634	+		LRK54_RS10050	0.29	-1.4
2,210,634	+		LRK54_RS10050	0.29	-0.4
2,210,634	+		LRK54_RS10050	0.29	+0.7
2,210,634	+		LRK54_RS10050	0.29	+1.6
2,210,634	+		LRK54_RS10050	0.29	+0.7
2,210,634	+		LRK54_RS10050	0.29	+0.1
2,210,634	+		LRK54_RS10050	0.29	+3.2
2,210,635	-		LRK54_RS10050	0.29	+1.6
2,210,635	-		LRK54_RS10050	0.29	+1.4
2,210,635	-		LRK54_RS10050	0.29	+1.2
2,210,635	-		LRK54_RS10050	0.29	-0.0
2,210,635	-		LRK54_RS10050	0.29	-0.1
2,210,635	-		LRK54_RS10050	0.29	-2.5
2,210,635	-		LRK54_RS10050	0.29	+1.7
2,210,635	-		LRK54_RS10050	0.29	+0.2
2,210,635	-		LRK54_RS10050	0.29	-1.4
2,210,769	+		LRK54_RS10050	0.47	+0.2
2,210,769	+		LRK54_RS10050	0.47	+0.2
2,210,769	+		LRK54_RS10050	0.47	+2.4
2,210,769	+		LRK54_RS10050	0.47	+1.2
2,210,769	+		LRK54_RS10050	0.47	-1.8
2,210,769	+		LRK54_RS10050	0.47	+0.1
2,210,769	+		LRK54_RS10050	0.47	+0.0
2,210,769	+		LRK54_RS10050	0.47	+2.0
2,210,769	+		LRK54_RS10050	0.47	-0.6
2,210,769	+		LRK54_RS10050	0.47	+2.0
2,210,769	+		LRK54_RS10050	0.47	-1.8
2,210,769	+		LRK54_RS10050	0.47	-0.6
2,210,769	+		LRK54_RS10050	0.47	+1.1
2,210,769	+		LRK54_RS10050	0.47	+0.4
2,210,769	+		LRK54_RS10050	0.47	+1.4
2,210,769	+		LRK54_RS10050	0.47	-1.3
2,210,769	+		LRK54_RS10050	0.47	+0.2
2,210,769	+		LRK54_RS10050	0.47	+1.1
2,210,769	+		LRK54_RS10050	0.47	+0.5
2,210,769	+		LRK54_RS10050	0.47	-0.0
2,210,769	+		LRK54_RS10050	0.47	+2.7
2,210,769	+		LRK54_RS10050	0.47	-1.0
2,210,769	+		LRK54_RS10050	0.47	+0.2
2,210,769	+		LRK54_RS10050	0.47	+0.4
2,210,769	+		LRK54_RS10050	0.47	+2.2
2,210,769	+		LRK54_RS10050	0.47	+1.3
2,210,769	+		LRK54_RS10050	0.47	+0.6
2,210,769	+		LRK54_RS10050	0.47	-0.3
2,210,769	+		LRK54_RS10050	0.47	-0.5
2,210,769	+		LRK54_RS10050	0.47	-0.1
2,210,769	+		LRK54_RS10050	0.47	+1.2
2,210,769	+		LRK54_RS10050	0.47	-0.5
2,210,769	+		LRK54_RS10050	0.47	+1.6
2,210,769	+		LRK54_RS10050	0.47	+0.1
2,210,769	+		LRK54_RS10050	0.47	+0.8
2,210,769	+		LRK54_RS10050	0.47	+1.6
2,210,769	+		LRK54_RS10050	0.47	+0.3
2,210,769	+		LRK54_RS10050	0.47	-1.0
2,210,769	+		LRK54_RS10050	0.47	+0.9
2,210,769	+		LRK54_RS10050	0.47	+0.9
2,210,769	+		LRK54_RS10050	0.47	-0.6
2,210,770	-		LRK54_RS10050	0.47	+0.9
2,210,770	-		LRK54_RS10050	0.47	-1.1
2,210,770	-		LRK54_RS10050	0.47	+1.2
2,210,770	-		LRK54_RS10050	0.47	+0.9
2,210,770	-		LRK54_RS10050	0.47	+2.9
2,210,770	-		LRK54_RS10050	0.47	+1.7
2,210,770	-		LRK54_RS10050	0.47	-0.4
2,210,770	-		LRK54_RS10050	0.47	-0.4
2,210,770	-		LRK54_RS10050	0.47	+2.2
2,210,770	-		LRK54_RS10050	0.47	+3.2
2,210,770	-		LRK54_RS10050	0.47	+0.1
2,210,770	-		LRK54_RS10050	0.47	-0.2
2,210,770	-		LRK54_RS10050	0.47	+0.6
2,210,770	-		LRK54_RS10050	0.47	+2.5
2,210,770	-		LRK54_RS10050	0.47	+0.2
2,210,770	-		LRK54_RS10050	0.47	+0.2
2,210,770	-		LRK54_RS10050	0.47	+3.2
2,210,770	-		LRK54_RS10050	0.47	+2.0
2,210,770	-		LRK54_RS10050	0.47	+1.2
2,210,770	-		LRK54_RS10050	0.47	-1.7
2,210,770	-		LRK54_RS10050	0.47	+0.7
2,210,770	-		LRK54_RS10050	0.47	-1.5
2,210,770	-		LRK54_RS10050	0.47	+0.6
2,210,770	-		LRK54_RS10050	0.47	-0.2
2,210,770	-		LRK54_RS10050	0.47	+2.2
2,210,770	-		LRK54_RS10050	0.47	+0.1
2,210,770	-		LRK54_RS10050	0.47	+0.9
2,210,770	-		LRK54_RS10050	0.47	+0.0
2,210,770	-		LRK54_RS10050	0.47	+2.8
2,210,770	-		LRK54_RS10050	0.47	+2.2
2,210,770	-		LRK54_RS10050	0.47	-1.1
2,210,770	-		LRK54_RS10050	0.47	-0.3
2,210,770	-		LRK54_RS10050	0.47	-1.0
2,210,770	-		LRK54_RS10050	0.47	+0.8
2,210,770	-		LRK54_RS10050	0.47	+2.4
2,210,770	-		LRK54_RS10050	0.47	+0.2
2,210,770	-		LRK54_RS10050	0.47	+0.7
2,210,770	-		LRK54_RS10050	0.47	+0.2
2,210,770	-		LRK54_RS10050	0.47	-0.5
2,210,836	+		LRK54_RS10050	0.55	-0.1
2,210,836	+		LRK54_RS10050	0.55	-0.4
2,210,836	+		LRK54_RS10050	0.55	+0.4
2,210,836	+		LRK54_RS10050	0.55	-1.0
2,210,836	+		LRK54_RS10050	0.55	-1.1
2,210,837	-		LRK54_RS10050	0.55	+0.9
2,210,853	+		LRK54_RS10050	0.57	+1.6
2,210,853	+		LRK54_RS10050	0.57	+1.3
2,210,854	-		LRK54_RS10050	0.58	+2.3
2,210,854	-		LRK54_RS10050	0.58	+0.2
2,210,915	-		LRK54_RS10050	0.65	+0.1
2,210,928	+		LRK54_RS10050	0.67	+1.0
2,210,928	+		LRK54_RS10050	0.67	-0.8
2,210,928	+		LRK54_RS10050	0.67	-0.8
2,210,928	+		LRK54_RS10050	0.67	+0.6
2,210,928	+		LRK54_RS10050	0.67	+0.9
2,210,928	+		LRK54_RS10050	0.67	+0.6
2,210,928	+		LRK54_RS10050	0.67	-2.1
2,210,929	-		LRK54_RS10050	0.67	+0.1
2,210,929	-		LRK54_RS10050	0.67	-0.1
2,210,929	-		LRK54_RS10050	0.67	+0.6
2,211,021	+		LRK54_RS10050	0.79	+1.2
2,211,039	+		LRK54_RS10050	0.81	+1.3
2,211,039	+		LRK54_RS10050	0.81	+0.7
2,211,039	+		LRK54_RS10050	0.81	+0.9
2,211,039	+		LRK54_RS10050	0.81	+1.6
2,211,039	+		LRK54_RS10050	0.81	-0.1
2,211,039	+		LRK54_RS10050	0.81	-2.0
2,211,039	+		LRK54_RS10050	0.81	+0.6
2,211,040	-		LRK54_RS10050	0.81	+1.5
2,211,040	-		LRK54_RS10050	0.81	+0.7
2,211,040	-		LRK54_RS10050	0.81	+0.2
2,211,040	-		LRK54_RS10050	0.81	-1.2
2,211,040	-		LRK54_RS10050	0.81	+1.7
2,211,040	-		LRK54_RS10050	0.81	-1.4
2,211,040	-		LRK54_RS10050	0.81	+1.4
2,211,040	-		LRK54_RS10050	0.81	-0.3
2,211,040	-		LRK54_RS10050	0.81	+2.4
2,211,040	-		LRK54_RS10050	0.81	-0.8
2,211,040	-		LRK54_RS10050	0.81	+1.6
2,211,040	-		LRK54_RS10050	0.81	-0.1
2,211,040	-		LRK54_RS10050	0.81	+1.1
2,211,040	-		LRK54_RS10050	0.81	-0.6
2,211,040	-		LRK54_RS10050	0.81	+1.6
2,211,040	-		LRK54_RS10050	0.81	+0.8
2,211,040	-		LRK54_RS10050	0.81	+2.2
2,211,055	+		LRK54_RS10050	0.83	-0.4
2,211,056	-		LRK54_RS10050	0.83	-1.2
2,211,056	-		LRK54_RS10050	0.83	+0.6
2,211,056	-		LRK54_RS10050	0.83	+0.6
2,211,057	+		LRK54_RS10050	0.84	+0.2
2,211,057	+		LRK54_RS10050	0.84	+0.0
2,211,057	+		LRK54_RS10050	0.84	-1.1
2,211,057	+		LRK54_RS10050	0.84	+2.0
2,211,058	-		LRK54_RS10050	0.84	+1.2
2,211,058	-		LRK54_RS10050	0.84	+2.2
2,211,058	-		LRK54_RS10050	0.84	+1.6
2,211,058	-		LRK54_RS10050	0.84	-0.4
2,211,078	+		LRK54_RS10050	0.86	-0.0
2,211,079	-		LRK54_RS10050	0.86	+0.5
2,211,079	-		LRK54_RS10050	0.86	+0.6
2,211,102	+		LRK54_RS10050	0.89	+1.1
2,211,102	+		LRK54_RS10050	0.89	-2.1
2,211,102	+		LRK54_RS10050	0.89	-0.8
2,211,102	+		LRK54_RS10050	0.89	-1.1
2,211,213	+				+1.2
2,211,213	+				-1.0
2,211,213	+				+1.1
2,211,213	+				+2.3
2,211,213	+				+0.4
2,211,213	+				-0.7
2,211,213	+				-1.0
2,211,213	+				+0.7
2,211,213	+				+1.1
2,211,213	+				+0.1
2,211,213	+				-0.7
2,211,213	+				-2.4
2,211,213	+				-1.1
2,211,213	+				-1.1
2,211,213	+				+0.1
2,211,214	-				+0.0
2,211,214	-				+0.9
2,211,214	-				+0.4
2,211,214	-				-0.1
2,211,214	-				-0.2
2,211,214	-				-0.1
2,211,214	-				+0.4
2,211,214	-				-0.8
2,211,214	-				-0.0
2,211,214	-				+1.2
2,211,214	-				-0.4
2,211,214	-				-1.1
2,211,214	-				-0.7
2,211,214	-				+0.6
2,211,214	-				-0.8
2,211,214	-				-0.2
2,211,214	-				-1.2
2,211,214	-				-2.4
2,211,214	-				+0.4
2,211,218	+				-1.9
2,211,219	-				-1.0
2,211,219	-				-0.6
2,211,309	+				-0.4
2,211,309	+				+0.2
2,211,309	+				-0.4
2,211,309	+				-0.8
2,211,309	+				-2.1
2,211,309	+				+0.2
2,211,309	+				-1.0
2,211,309	+				-1.1
2,211,309	+				+0.9
2,211,309	+				-1.7
2,211,310	-				-0.6
2,211,310	-				-1.8
2,211,310	-				-0.9
2,211,310	-				-0.9
2,211,310	-				+0.9
2,211,310	-				+2.6
2,211,310	-				+1.2
2,211,310	-				-0.8
2,211,645	+		LRK54_RS10055	0.31	+1.7
2,211,645	+		LRK54_RS10055	0.31	-1.1
2,211,645	+		LRK54_RS10055	0.31	-1.9
2,211,645	+		LRK54_RS10055	0.31	+0.0
2,211,645	+		LRK54_RS10055	0.31	-1.4
2,211,645	+		LRK54_RS10055	0.31	-1.0
2,211,645	+		LRK54_RS10055	0.31	-1.2
2,211,645	+		LRK54_RS10055	0.31	+0.2
2,211,646	-		LRK54_RS10055	0.31	-0.7
2,211,646	-		LRK54_RS10055	0.31	+0.5
2,211,646	-		LRK54_RS10055	0.31	+0.4
2,211,646	-		LRK54_RS10055	0.31	-2.4
2,211,646	-		LRK54_RS10055	0.31	-1.2
2,211,646	-		LRK54_RS10055	0.31	+0.2
2,211,646	-		LRK54_RS10055	0.31	+0.9
2,211,795	+		LRK54_RS10055	0.42	+0.4
2,211,795	+		LRK54_RS10055	0.42	-0.5
2,212,035	+		LRK54_RS10055	0.60	-0.9
2,212,035	+		LRK54_RS10055	0.60	-0.2
2,212,035	+		LRK54_RS10055	0.60	+1.6
2,212,036	-		LRK54_RS10055	0.60	+0.0
2,212,036	-		LRK54_RS10055	0.60	+0.9
2,212,036	-		LRK54_RS10055	0.60	+0.0
2,212,036	-		LRK54_RS10055	0.60	-2.1
2,212,036	-		LRK54_RS10055	0.60	-1.4
2,212,036	-		LRK54_RS10055	0.60	+0.6
2,212,076	-		LRK54_RS10055	0.63	+0.5
2,212,148	+		LRK54_RS10055	0.68	-0.7
2,212,148	+		LRK54_RS10055	0.68	+1.2
2,212,148	+		LRK54_RS10055	0.68	-1.1
2,212,148	+		LRK54_RS10055	0.68	+0.1
2,212,148	+		LRK54_RS10055	0.68	+1.0
2,212,148	+		LRK54_RS10055	0.68	+1.2
2,212,148	+		LRK54_RS10055	0.68	+0.4
2,212,148	+		LRK54_RS10055	0.68	-1.6
2,212,149	-		LRK54_RS10055	0.68	-1.2
2,212,149	-		LRK54_RS10055	0.68	-0.4
2,212,149	-		LRK54_RS10055	0.68	-1.9
2,212,149	-		LRK54_RS10055	0.68	-1.5
2,212,149	-		LRK54_RS10055	0.68	-0.3
2,212,149	-		LRK54_RS10055	0.68	-0.9
2,212,149	-		LRK54_RS10055	0.68	-0.5
2,212,149	-		LRK54_RS10055	0.68	-3.0
2,212,149	-		LRK54_RS10055	0.68	+0.9
2,212,149	-		LRK54_RS10055	0.68	+0.0
2,212,149	-		LRK54_RS10055	0.68	+0.9