Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09750

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,128,407	+		LRK54_RS09740	0.65	-0.1
2,128,408	-		LRK54_RS09740	0.65	-1.3
2,128,455	-		LRK54_RS09740	0.70	-1.5
2,128,464	+		LRK54_RS09740	0.71	-0.9
2,128,464	+		LRK54_RS09740	0.71	-0.1
2,128,464	+		LRK54_RS09740	0.71	-1.3
2,128,464	+		LRK54_RS09740	0.71	+0.0
2,128,464	+		LRK54_RS09740	0.71	+0.6
2,128,464	+		LRK54_RS09740	0.71	+0.9
2,128,464	+		LRK54_RS09740	0.71	+1.2
2,128,464	+		LRK54_RS09740	0.71	+0.9
2,128,465	-		LRK54_RS09740	0.71	+1.2
2,128,465	-		LRK54_RS09740	0.71	-1.3
2,128,465	-		LRK54_RS09740	0.71	-2.9
2,128,465	-		LRK54_RS09740	0.71	+3.2
2,128,465	-		LRK54_RS09740	0.71	-0.7
2,128,465	-		LRK54_RS09740	0.71	+0.0
2,128,465	-		LRK54_RS09740	0.71	+2.8
2,128,465	-		LRK54_RS09740	0.71	-0.6
2,128,465	-		LRK54_RS09740	0.71	-1.2
2,128,465	-		LRK54_RS09740	0.71	-1.1
2,128,465	-		LRK54_RS09740	0.71	-1.1
2,128,465	-		LRK54_RS09740	0.71	+1.2
2,128,501	+		LRK54_RS09740	0.75	-1.7
2,128,501	+		LRK54_RS09740	0.75	+0.2
2,128,501	+		LRK54_RS09740	0.75	-0.9
2,128,501	+		LRK54_RS09740	0.75	+1.2
2,128,501	+		LRK54_RS09740	0.75	+1.6
2,128,501	+		LRK54_RS09740	0.75	-1.3
2,128,501	+		LRK54_RS09740	0.75	+0.2
2,128,501	+		LRK54_RS09740	0.75	-2.3
2,128,501	+		LRK54_RS09740	0.75	-0.4
2,128,501	+		LRK54_RS09740	0.75	+1.2
2,128,501	+		LRK54_RS09740	0.75	+1.2
2,128,501	+		LRK54_RS09740	0.75	-2.3
2,128,501	+		LRK54_RS09740	0.75	-1.1
2,128,502	-		LRK54_RS09740	0.75	+1.6
2,128,502	-		LRK54_RS09740	0.75	+0.6
2,128,502	-		LRK54_RS09740	0.75	+1.2
2,128,502	-		LRK54_RS09740	0.75	-1.3
2,128,502	-		LRK54_RS09740	0.75	+1.2
2,128,502	-		LRK54_RS09740	0.75	-0.8
2,128,502	-		LRK54_RS09740	0.75	+1.2
2,128,502	-		LRK54_RS09740	0.75	-0.1
2,128,606	+		LRK54_RS09740	0.85	-1.0
2,128,626	+		LRK54_RS09740	0.87	+0.6
2,128,627	+		LRK54_RS09740	0.88	-0.9
2,128,627	+		LRK54_RS09740	0.88	-0.9
2,128,627	+		LRK54_RS09740	0.88	+0.7
2,128,627	+		LRK54_RS09740	0.88	-0.8
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	-1.0
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	-2.0
2,128,627	+		LRK54_RS09740	0.88	+0.9
2,128,627	+		LRK54_RS09740	0.88	-0.2
2,128,627	+		LRK54_RS09740	0.88	-0.4
2,128,627	+		LRK54_RS09740	0.88	-3.0
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	+1.6
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	-1.2
2,128,627	+		LRK54_RS09740	0.88	-1.7
2,128,627	+		LRK54_RS09740	0.88	+1.1
2,128,627	+		LRK54_RS09740	0.88	-1.8
2,128,627	+		LRK54_RS09740	0.88	+0.6
2,128,627	+		LRK54_RS09740	0.88	-1.9
2,128,627	+		LRK54_RS09740	0.88	-1.5
2,128,627	+		LRK54_RS09740	0.88	+1.8
2,128,627	+		LRK54_RS09740	0.88	-1.7
2,128,627	+		LRK54_RS09740	0.88	-2.1
2,128,627	+		LRK54_RS09740	0.88	-1.8
2,128,627	+		LRK54_RS09740	0.88	-0.1
2,128,627	+		LRK54_RS09740	0.88	+0.9
2,128,627	+		LRK54_RS09740	0.88	-1.0
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	-0.5
2,128,627	+		LRK54_RS09740	0.88	-1.9
2,128,627	+		LRK54_RS09740	0.88	-2.1
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	-1.6
2,128,627	+		LRK54_RS09740	0.88	-0.8
2,128,627	+		LRK54_RS09740	0.88	+1.0
2,128,628	-		LRK54_RS09740	0.88	-1.7
2,128,628	-		LRK54_RS09740	0.88	+1.1
2,128,628	-		LRK54_RS09740	0.88	-3.4
2,128,628	-		LRK54_RS09740	0.88	-1.1
2,128,628	-		LRK54_RS09740	0.88	-3.2
2,128,628	-		LRK54_RS09740	0.88	-0.7
2,128,628	-		LRK54_RS09740	0.88	-1.3
2,128,628	-		LRK54_RS09740	0.88	+0.9
2,128,628	-		LRK54_RS09740	0.88	-1.5
2,128,628	-		LRK54_RS09740	0.88	+1.2
2,128,628	-		LRK54_RS09740	0.88	+0.6
2,128,628	-		LRK54_RS09740	0.88	-2.9
2,128,628	-		LRK54_RS09740	0.88	-3.4
2,128,628	-		LRK54_RS09740	0.88	-1.2
2,128,628	-		LRK54_RS09740	0.88	-0.4
2,128,628	-		LRK54_RS09740	0.88	+0.8
2,128,628	-		LRK54_RS09740	0.88	-0.8
2,128,628	-		LRK54_RS09740	0.88	-2.2
2,128,628	-		LRK54_RS09740	0.88	+0.4
2,128,628	-		LRK54_RS09740	0.88	+0.1
2,128,628	-		LRK54_RS09740	0.88	-1.6
2,128,628	-		LRK54_RS09740	0.88	-0.1
2,128,628	-		LRK54_RS09740	0.88	-0.4
2,128,628	-		LRK54_RS09740	0.88	+1.6
2,128,628	-		LRK54_RS09740	0.88	-0.7
2,128,628	-		LRK54_RS09740	0.88	+1.0
2,128,628	-		LRK54_RS09740	0.88	-0.1
2,128,628	-		LRK54_RS09740	0.88	-1.1
2,128,628	-		LRK54_RS09740	0.88	-2.6
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	+0.6
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	+0.9
2,128,628	-		LRK54_RS09740	0.88	-3.2
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	-2.1
2,128,628	-		LRK54_RS09740	0.88	-0.6
2,128,628	-		LRK54_RS09740	0.88	-0.4
2,128,628	-		LRK54_RS09740	0.88	+1.2
2,128,628	-		LRK54_RS09740	0.88	+0.2
2,128,628	-		LRK54_RS09740	0.88	+0.4
2,128,628	-		LRK54_RS09740	0.88	-1.6
2,128,628	-		LRK54_RS09740	0.88	-1.6
2,128,645	+		LRK54_RS09740	0.89	+5.4
2,128,645	+		LRK54_RS09740	0.89	-2.1
2,128,646	-		LRK54_RS09740	0.90	-0.6
2,128,646	-		LRK54_RS09740	0.90	-2.3
2,128,646	-		LRK54_RS09740	0.90	-0.1
2,128,646	-		LRK54_RS09740	0.90	-0.7
2,128,646	-		LRK54_RS09740	0.90	+2.2
2,128,646	-		LRK54_RS09740	0.90	+1.0
2,128,663	+				-2.2
2,128,663	+				-0.4
2,128,663	+				+0.9
2,128,663	+				-0.4
2,128,663	+				-1.2
2,128,663	+				-1.5
2,128,664	-				+2.2
2,128,664	-				+0.4
2,128,664	-				+0.4
2,128,664	-				+0.6
2,128,664	-				-0.5
2,128,664	-				-0.1
2,128,664	-				-1.0
2,128,664	-				+1.2
2,128,664	-				-0.6
2,128,664	-				+1.2
2,128,810	+		LRK54_RS09745	0.22	-1.3
2,128,810	+		LRK54_RS09745	0.22	-0.7
2,128,810	+		LRK54_RS09745	0.22	-2.7
2,128,810	+		LRK54_RS09745	0.22	+0.0
2,128,810	+		LRK54_RS09745	0.22	+3.2
2,128,810	+		LRK54_RS09745	0.22	-0.4
2,128,810	+		LRK54_RS09745	0.22	-1.2
2,128,810	+		LRK54_RS09745	0.22	+0.2
2,128,810	+		LRK54_RS09745	0.22	-2.5
2,128,810	+		LRK54_RS09745	0.22	+1.8
2,128,811	-		LRK54_RS09745	0.22	-0.5
2,128,811	-		LRK54_RS09745	0.22	-2.2
2,128,811	-		LRK54_RS09745	0.22	+1.2
2,128,811	-		LRK54_RS09745	0.22	-2.1
2,128,811	-		LRK54_RS09745	0.22	-1.3
2,128,811	-		LRK54_RS09745	0.22	-0.3
2,128,811	-		LRK54_RS09745	0.22	-0.1
2,129,186	+		LRK54_RS09745	0.79	+0.9
2,129,593	+		LRK54_RS09750	0.11	-2.8
2,129,593	+		LRK54_RS09750	0.11	+0.0
2,129,593	+		LRK54_RS09750	0.11	-2.5
2,129,593	+		LRK54_RS09750	0.11	-2.0
2,129,593	+		LRK54_RS09750	0.11	-2.2
2,129,594	-		LRK54_RS09750	0.11	-0.8
2,129,594	-		LRK54_RS09750	0.11	-2.0
2,129,594	-		LRK54_RS09750	0.11	+0.2
2,129,594	-		LRK54_RS09750	0.11	+1.6
2,129,659	+		LRK54_RS09750	0.14	+1.7
2,129,659	+		LRK54_RS09750	0.14	-2.4
2,129,659	+		LRK54_RS09750	0.14	-2.9
2,129,659	+		LRK54_RS09750	0.14	-1.8
2,129,659	+		LRK54_RS09750	0.14	+1.2
2,129,659	+		LRK54_RS09750	0.14	+2.2
2,129,660	-		LRK54_RS09750	0.14	-0.3
2,129,704	+		LRK54_RS09750	0.16	+0.0
2,129,704	+		LRK54_RS09750	0.16	-0.6
2,129,704	+		LRK54_RS09750	0.16	-0.7
2,129,704	+		LRK54_RS09750	0.16	-1.6
2,129,704	+		LRK54_RS09750	0.16	-1.3
2,129,704	+		LRK54_RS09750	0.16	+0.0
2,129,704	+				+1.6
2,129,704	+		LRK54_RS09750	0.16	+0.9
2,129,704	+		LRK54_RS09750	0.16	+1.2
2,129,705	-		LRK54_RS09750	0.16	-1.1
2,129,705	-		LRK54_RS09750	0.16	-1.0
2,129,705	-		LRK54_RS09750	0.16	-1.6
2,129,705	-		LRK54_RS09750	0.16	+1.4
2,129,705	-		LRK54_RS09750	0.16	+0.8
2,130,016	+		LRK54_RS09750	0.30	+0.6
2,130,017	-		LRK54_RS09750	0.30	+0.2
2,130,259	+		LRK54_RS09750	0.40	-1.4
2,130,259	+		LRK54_RS09750	0.40	-0.8
2,130,259	+		LRK54_RS09750	0.40	+1.6
2,130,260	-		LRK54_RS09750	0.40	+0.0
2,130,323	+		LRK54_RS09750	0.43	+0.0
2,130,367	+		LRK54_RS09750	0.45	-2.9
2,130,367	+		LRK54_RS09750	0.45	+0.3
2,130,367	+		LRK54_RS09750	0.45	-0.3
2,130,367	+		LRK54_RS09750	0.45	-0.7
2,130,367	+		LRK54_RS09750	0.45	+0.0
2,130,367	+		LRK54_RS09750	0.45	-1.1
2,130,368	-		LRK54_RS09750	0.45	+1.2
2,130,368	-		LRK54_RS09750	0.45	-0.8
2,130,368	-		LRK54_RS09750	0.45	-2.1
2,130,368	-		LRK54_RS09750	0.45	-1.2
2,130,368	-		LRK54_RS09750	0.45	-0.7
2,130,368	-		LRK54_RS09750	0.45	-1.6
2,130,379	+		LRK54_RS09750	0.45	-2.1
2,130,379	+		LRK54_RS09750	0.45	+1.2
2,130,379	+		LRK54_RS09750	0.45	+0.2
2,130,379	+		LRK54_RS09750	0.45	-0.7
2,130,379	+		LRK54_RS09750	0.45	+0.0
2,130,379	+		LRK54_RS09750	0.45	+0.9
2,130,379	+		LRK54_RS09750	0.45	+0.9
2,130,379	+		LRK54_RS09750	0.45	-1.5
2,130,379	+		LRK54_RS09750	0.45	+0.6
2,130,379	+		LRK54_RS09750	0.45	-3.1
2,130,379	+		LRK54_RS09750	0.45	+0.6
2,130,380	-		LRK54_RS09750	0.45	-0.4
2,130,380	-		LRK54_RS09750	0.45	-1.6
2,130,380	-		LRK54_RS09750	0.45	-0.5
2,130,380	-		LRK54_RS09750	0.45	-0.8
2,130,380	-		LRK54_RS09750	0.45	-2.1
2,130,380	-		LRK54_RS09750	0.45	-1.3
2,130,380	-		LRK54_RS09750	0.45	+0.2
2,130,380	-		LRK54_RS09750	0.45	-1.2
2,130,380	-		LRK54_RS09750	0.45	-0.1
2,130,380	-		LRK54_RS09750	0.45	-0.1
2,130,380	-		LRK54_RS09750	0.45	-1.1
2,130,380	-		LRK54_RS09750	0.45	-1.6
2,130,380	-		LRK54_RS09750	0.45	-0.9
2,130,380	-		LRK54_RS09750	0.45	-0.3
2,130,380	-		LRK54_RS09750	0.45	+0.2
2,130,460	+		LRK54_RS09750	0.49	-0.6
2,130,461	-		LRK54_RS09750	0.49	-0.8
2,130,461	-		LRK54_RS09750	0.49	-0.6
2,130,461	-		LRK54_RS09750	0.49	-0.8
2,130,721	+		LRK54_RS09750	0.60	-0.9
2,130,721	+		LRK54_RS09750	0.60	-1.9
2,130,721	+		LRK54_RS09750	0.60	-0.1
2,130,722	-		LRK54_RS09750	0.60	+0.2
2,130,844	+		LRK54_RS09750	0.65	-2.0
2,130,845	-		LRK54_RS09750	0.66	+0.4
2,131,022	-		LRK54_RS09750	0.73	-0.8
2,131,140	+		LRK54_RS09750	0.78	-0.4
2,131,140	+		LRK54_RS09750	0.78	-1.5
2,131,140	+		LRK54_RS09750	0.78	-2.1
2,131,140	+		LRK54_RS09750	0.78	-2.3
2,131,141	-		LRK54_RS09750	0.78	-0.4
2,131,141	-		LRK54_RS09750	0.78	+0.2
2,131,141	-		LRK54_RS09750	0.78	+1.6
2,131,207	+		LRK54_RS09750	0.81	-2.4
2,131,208	-		LRK54_RS09750	0.81	-2.3
2,131,208	-		LRK54_RS09750	0.81	+3.2
2,131,423	+				-2.1
2,131,423	+				+1.2
2,131,423	+				+0.2
2,131,424	-				+0.0
2,131,424	-				-1.7
2,131,424	-				-1.1
2,131,424	-				+0.0
2,131,424	-				-0.9
2,131,424	-				-2.7
2,131,799	+		LRK54_RS09755	0.40	-0.8
2,131,799	+		LRK54_RS09755	0.40	-1.1
2,131,800	-		LRK54_RS09755	0.40	+0.6
2,131,800	-		LRK54_RS09755	0.40	+0.2
2,131,800	-		LRK54_RS09755	0.40	+0.9
2,131,913	+		LRK54_RS09755	0.66	-2.4
2,131,913	+		LRK54_RS09755	0.66	+1.2
2,131,913	+		LRK54_RS09755	0.66	-0.1
2,131,913	+		LRK54_RS09755	0.66	-0.8
2,131,913	+		LRK54_RS09755	0.66	-2.0
2,131,913	+		LRK54_RS09755	0.66	+1.2
2,131,913	+		LRK54_RS09755	0.66	-0.8
2,131,913	+		LRK54_RS09755	0.66	-1.6
2,131,913	+		LRK54_RS09755	0.66	-0.8
2,131,913	+		LRK54_RS09755	0.66	-1.4
2,131,913	+		LRK54_RS09755	0.66	+0.7
2,131,913	+		LRK54_RS09755	0.66	-0.9
2,131,913	+		LRK54_RS09755	0.66	-2.8
2,131,914	-		LRK54_RS09755	0.66	-0.9
2,131,914	-		LRK54_RS09755	0.66	-0.5
2,131,914	-		LRK54_RS09755	0.66	+0.4
2,131,914	-		LRK54_RS09755	0.66	-2.7
2,131,914	-		LRK54_RS09755	0.66	+0.4
2,131,914	-		LRK54_RS09755	0.66	-1.2
2,131,914	-		LRK54_RS09755	0.66	+0.4
2,131,914	-		LRK54_RS09755	0.66	-0.1
2,131,914	-		LRK54_RS09755	0.66	-1.2
2,131,914	-		LRK54_RS09755	0.66	-0.3
2,131,961	+		LRK54_RS09755	0.77	-0.5
2,131,961	+		LRK54_RS09755	0.77	-0.6
2,131,962	-		LRK54_RS09755	0.77	-1.0
2,131,985	+		LRK54_RS09755	0.83	-0.4
2,131,985	+		LRK54_RS09755	0.83	-2.0
2,131,985	+		LRK54_RS09755	0.83	-0.5
2,131,985	+		LRK54_RS09755	0.83	-0.4
2,131,985	+		LRK54_RS09755	0.83	+1.6
2,132,544	+		LRK54_RS09760	0.63	-1.5
2,132,544	+		LRK54_RS09760	0.63	+0.6
2,132,544	+		LRK54_RS09760	0.63	-1.7
2,132,544	+		LRK54_RS09760	0.63	-1.3
2,132,544	+		LRK54_RS09760	0.63	-1.1
2,132,544	+		LRK54_RS09760	0.63	+0.0
2,132,544	+		LRK54_RS09760	0.63	+0.9
2,132,544	+		LRK54_RS09760	0.63	-0.6
2,132,545	-		LRK54_RS09760	0.63	-1.4
2,132,545	-		LRK54_RS09760	0.63	+0.7
2,132,545	-		LRK54_RS09760	0.63	-1.7
2,132,545	-		LRK54_RS09760	0.63	-2.4
2,132,545	-		LRK54_RS09760	0.63	+0.2
2,132,545	-		LRK54_RS09760	0.63	-0.3