Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09545

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,097,677	+		LRK54_RS09535	0.74	+1.5
2,097,678	-		LRK54_RS09535	0.74	+0.9
2,097,678	-		LRK54_RS09535	0.74	-2.6
2,097,678	-		LRK54_RS09535	0.74	+0.7
2,097,678	-		LRK54_RS09535	0.74	-1.0
2,097,678	-		LRK54_RS09535	0.74	-0.4
2,097,687	+		LRK54_RS09535	0.74	+0.9
2,097,687	+		LRK54_RS09535	0.74	+0.0
2,097,687	+		LRK54_RS09535	0.74	-0.5
2,097,688	-		LRK54_RS09535	0.75	+1.9
2,097,688	-		LRK54_RS09535	0.75	+0.4
2,097,688	-		LRK54_RS09535	0.75	-1.6
2,097,689	+		LRK54_RS09535	0.75	-0.5
2,097,689	+		LRK54_RS09535	0.75	+0.2
2,097,689	+		LRK54_RS09535	0.75	-0.8
2,097,689	+		LRK54_RS09535	0.75	+0.9
2,097,689	+		LRK54_RS09535	0.75	+0.5
2,097,689	+		LRK54_RS09535	0.75	+0.9
2,097,689	+		LRK54_RS09535	0.75	+1.9
2,097,689	+		LRK54_RS09535	0.75	-1.3
2,097,689	+		LRK54_RS09535	0.75	-2.0
2,097,689	+		LRK54_RS09535	0.75	+0.0
2,097,689	+		LRK54_RS09535	0.75	-1.2
2,097,689	+		LRK54_RS09535	0.75	+1.6
2,097,690	-		LRK54_RS09535	0.75	-1.0
2,097,690	-		LRK54_RS09535	0.75	-0.5
2,097,690	-		LRK54_RS09535	0.75	-0.7
2,097,690	-		LRK54_RS09535	0.75	+0.0
2,097,690	-		LRK54_RS09535	0.75	-2.0
2,097,690	-		LRK54_RS09535	0.75	-0.6
2,097,794	+		LRK54_RS09535	0.82	-1.7
2,097,794	+		LRK54_RS09535	0.82	-0.0
2,097,794	+		LRK54_RS09535	0.82	+0.9
2,097,794	+		LRK54_RS09535	0.82	-1.1
2,097,794	+		LRK54_RS09535	0.82	-3.5
2,097,794	+		LRK54_RS09535	0.82	-1.0
2,097,795	-		LRK54_RS09535	0.82	+3.2
2,097,795	-		LRK54_RS09535	0.82	-0.4
2,097,838	+		LRK54_RS09535	0.85	-1.8
2,097,838	+		LRK54_RS09535	0.85	+3.2
2,097,838	+		LRK54_RS09535	0.85	-1.2
2,097,838	+		LRK54_RS09535	0.85	-1.0
2,097,839	-		LRK54_RS09535	0.85	+0.6
2,097,849	+		LRK54_RS09535	0.86	-1.4
2,097,849	+		LRK54_RS09535	0.86	+0.8
2,097,849	+		LRK54_RS09535	0.86	+1.1
2,097,850	-		LRK54_RS09535	0.86	+0.0
2,097,887	+		LRK54_RS09535	0.88	+0.2
2,097,887	+		LRK54_RS09535	0.88	-2.5
2,097,888	-		LRK54_RS09535	0.89	-1.2
2,097,888	-		LRK54_RS09535	0.89	+0.6
2,097,921	+				+0.4
2,097,921	+				+1.2
2,097,922	-				-0.4
2,098,152	+		LRK54_RS09540	0.27	+0.2
2,098,153	-		LRK54_RS09540	0.27	-1.0
2,098,153	-		LRK54_RS09540	0.27	+2.2
2,098,155	+		LRK54_RS09540	0.28	-0.3
2,098,155	+		LRK54_RS09540	0.28	-1.1
2,098,155	+		LRK54_RS09540	0.28	-0.3
2,098,156	-		LRK54_RS09540	0.28	-0.9
2,098,156	-		LRK54_RS09540	0.28	-0.9
2,098,156	-		LRK54_RS09540	0.28	+0.4
2,098,156	-		LRK54_RS09540	0.28	+0.6
2,098,156	-		LRK54_RS09540	0.28	-0.5
2,098,156	-		LRK54_RS09540	0.28	-1.3
2,098,203	+		LRK54_RS09540	0.45	-2.0
2,098,203	+		LRK54_RS09540	0.45	-2.0
2,098,203	+		LRK54_RS09540	0.45	+0.6
2,098,203	+		LRK54_RS09540	0.45	+0.4
2,098,204	-		LRK54_RS09540	0.45	-0.9
2,098,204	-		LRK54_RS09540	0.45	+0.9
2,098,204	-		LRK54_RS09540	0.45	-1.3
2,098,204	-		LRK54_RS09540	0.45	-1.7
2,098,287	+		LRK54_RS09540	0.75	-0.7
2,098,287	+		LRK54_RS09540	0.75	+0.4
2,098,287	+		LRK54_RS09540	0.75	+2.2
2,098,287	+		LRK54_RS09540	0.75	+0.5
2,098,287	+		LRK54_RS09540	0.75	-1.8
2,098,287	+		LRK54_RS09540	0.75	-1.7
2,098,287	+		LRK54_RS09540	0.75	-0.6
2,098,287	+		LRK54_RS09540	0.75	+0.7
2,098,287	+		LRK54_RS09540	0.75	-1.0
2,098,288	-		LRK54_RS09540	0.75	-1.6
2,098,288	-		LRK54_RS09540	0.75	+2.2
2,098,288	-		LRK54_RS09540	0.75	-0.3
2,098,312	+		LRK54_RS09540	0.84	-0.4
2,098,313	-		LRK54_RS09540	0.84	-2.8
2,098,313	-		LRK54_RS09540	0.84	+0.4
2,098,313	-		LRK54_RS09540	0.84	-0.7
2,098,313	-		LRK54_RS09540	0.84	+2.3
2,098,417	+				+0.0
2,098,417	+				+0.9
2,098,417	+				-1.7
2,098,417	+				+0.3
2,098,417	+				+2.2
2,098,417	+				+3.6
2,098,417	+				+0.0
2,098,417	+				-0.0
2,098,417	+				-0.1
2,098,417	+				+0.2
2,098,417	+				-1.8
2,098,417	+				-1.3
2,098,417	+				-0.5
2,098,418	-				-0.8
2,098,418	-				+0.4
2,098,418	-				-2.0
2,098,418	-				-1.3
2,098,418	-				-1.5
2,098,418	-				+0.0
2,098,418	-				-0.4
2,098,418	-				+0.6
2,098,418	-				-2.2
2,098,418	-				+0.6
2,098,418	-				-0.3
2,098,418	-				+0.4
2,098,418	-				+0.6
2,098,418	-				-0.9
2,098,457	+				-0.7
2,098,457	+				-1.2
2,098,457	+				-1.2
2,098,457	+				-0.1
2,098,457	+				-1.4
2,098,458	-				+2.2
2,098,458	-				+0.9
2,098,458	-				+0.2
2,098,458	-				-0.1
2,098,458	-				-1.1
2,098,517	-				+0.7
2,098,517	-				+0.9
2,098,534	+				+0.9
2,098,534	+				-0.5
2,098,535	-				-0.7
2,098,585	+				-2.7
2,098,585	+				-0.4
2,098,585	+				-0.5
2,098,585	+				+0.6
2,098,585	+				-1.0
2,098,586	-				-0.1
2,098,586	-				-2.1
2,098,586	-				-2.0
2,098,586	-				-1.6
2,098,646	+				+1.6
2,098,646	+				+0.0
2,098,646	+				-1.9
2,098,647	-				-0.5
2,098,647	-				-0.3
2,098,647	-				-1.0
2,098,647	-				-2.4
2,098,760	+		LRK54_RS09545	0.18	-1.1
2,098,760	+		LRK54_RS09545	0.18	+0.3
2,098,761	-		LRK54_RS09545	0.19	-2.6
2,098,761	-		LRK54_RS09545	0.19	-2.0
2,098,761	-		LRK54_RS09545	0.19	-0.6
2,098,761	-		LRK54_RS09545	0.19	-0.3
2,098,761	-		LRK54_RS09545	0.19	-0.5
2,098,965	+		LRK54_RS09545	0.63	-1.6
2,098,965	+		LRK54_RS09545	0.63	-0.1
2,098,965	+		LRK54_RS09545	0.63	-0.6
2,098,965	+		LRK54_RS09545	0.63	-0.3
2,098,965	+		LRK54_RS09545	0.63	-2.0
2,098,965	+		LRK54_RS09545	0.63	-1.9
2,098,965	+		LRK54_RS09545	0.63	-1.6
2,098,965	+		LRK54_RS09545	0.63	-0.5
2,098,965	+		LRK54_RS09545	0.63	-2.3
2,098,965	+		LRK54_RS09545	0.63	+0.8
2,098,965	+		LRK54_RS09545	0.63	+0.6
2,098,965	+		LRK54_RS09545	0.63	+0.5
2,098,966	-		LRK54_RS09545	0.63	-1.5
2,098,966	-		LRK54_RS09545	0.63	-1.4
2,099,219	+				-0.6
2,099,219	+				+1.2
2,099,219	+				+1.3
2,099,219	+				-0.6
2,099,219	+				-1.3
2,099,219	+				+1.6
2,099,219	+				+0.6
2,099,219	+				+0.2
2,099,219	+				-0.7
2,099,219	+				-1.7
2,099,219	+				-1.0
2,099,219	+				-0.0
2,099,220	-				-0.2
2,099,220	-				-0.5
2,099,220	-				-0.7
2,099,220	-				-1.0
2,099,220	-				+3.2
2,099,220	-				-2.4
2,099,220	-				-0.1
2,099,220	-				+0.5
2,099,279	-				+0.3
2,099,518	+		LRK54_RS09550	0.40	+2.0
2,099,518	+		LRK54_RS09550	0.40	-0.6
2,099,672	+		LRK54_RS09550	0.71	-2.2
2,099,672	+		LRK54_RS09550	0.71	-0.8
2,099,673	-		LRK54_RS09550	0.71	-0.6
2,099,673	-		LRK54_RS09550	0.71	-0.1
2,099,673	-		LRK54_RS09550	0.71	+2.2
2,099,673	-		LRK54_RS09550	0.71	+0.6
2,099,673	-		LRK54_RS09550	0.71	-0.5
2,099,673	-		LRK54_RS09550	0.71	+0.2
2,099,694	+		LRK54_RS09550	0.75	-0.3
2,099,694	+		LRK54_RS09550	0.75	+0.4
2,099,694	+		LRK54_RS09550	0.75	-2.6
2,099,694	+		LRK54_RS09550	0.75	-1.5
2,099,694	+		LRK54_RS09550	0.75	-0.3
2,099,694	+		LRK54_RS09550	0.75	-1.5
2,099,694	+		LRK54_RS09550	0.75	+3.2
2,099,694	+		LRK54_RS09550	0.75	+0.6
2,099,695	-		LRK54_RS09550	0.75	-0.4
2,099,695	-		LRK54_RS09550	0.75	-0.2
2,099,695	-		LRK54_RS09550	0.75	+0.0
2,099,695	-		LRK54_RS09550	0.75	-1.1
2,099,695	-		LRK54_RS09550	0.75	-0.9
2,099,695	-		LRK54_RS09550	0.75	+0.6
2,099,695	-		LRK54_RS09550	0.75	-1.0
2,099,695	-		LRK54_RS09550	0.75	-1.2
2,099,695	-		LRK54_RS09550	0.75	+0.9
2,099,766	+		LRK54_RS09550	0.89	+0.9
2,099,766	+		LRK54_RS09550	0.89	+2.6
2,099,766	+		LRK54_RS09550	0.89	+1.2
2,099,766	+		LRK54_RS09550	0.89	+0.3
2,099,766	+		LRK54_RS09550	0.89	+1.6
2,099,766	+		LRK54_RS09550	0.89	-0.1
2,099,766	+		LRK54_RS09550	0.89	-2.4
2,099,766	+		LRK54_RS09550	0.89	-1.1
2,099,766	+		LRK54_RS09550	0.89	+0.5
2,099,766	+		LRK54_RS09550	0.89	+2.2
2,099,766	+		LRK54_RS09550	0.89	-0.4
2,099,766	+		LRK54_RS09550	0.89	-0.3
2,099,767	-		LRK54_RS09550	0.89	+0.6
2,099,767	-		LRK54_RS09550	0.89	-1.8
2,099,767	-		LRK54_RS09550	0.89	-2.0
2,099,767	-		LRK54_RS09550	0.89	-0.6
2,099,767	-		LRK54_RS09550	0.89	+0.3
2,099,767	-		LRK54_RS09550	0.89	-0.3
2,099,767	-		LRK54_RS09550	0.89	+1.2
2,099,767	-		LRK54_RS09550	0.89	-0.2
2,099,767	-		LRK54_RS09550	0.89	+0.4
2,099,767	-		LRK54_RS09550	0.89	-1.9
2,099,795	-				+1.0
2,099,882	-				-1.3
2,099,896	+				-0.1
2,099,896	+				+0.2
2,099,896	+				+0.9
2,099,896	+				-0.7
2,099,896	+				-0.8
2,099,896	+				-0.2
2,099,896	+				-0.8
2,099,896	+				-1.1
2,099,896	+				+0.2
2,099,896	+				-1.6
2,099,896	+				+0.9
2,099,896	+				+0.0
2,099,896	+				-2.2
2,099,896	+				-1.3
2,099,896	+				+0.6
2,099,896	+				-2.2
2,099,897	-				-0.5
2,099,897	-				+0.9
2,099,897	-				+1.0
2,099,897	-				+1.4
2,099,897	-				+0.5
2,099,897	-				+1.6
2,099,897	-				-1.9
2,099,897	-				+1.1
2,099,897	-				-1.1
2,099,897	-				+1.1
2,099,897	-				+0.2
2,099,897	-				-0.7
2,099,897	-				+0.9
2,099,897	-				+0.2
2,099,897	-				+1.0
2,099,897	-				-1.5
2,099,897	-				-0.1
2,099,897	-				-0.8
2,099,897	-				-0.2
2,099,897	-				-2.1
2,100,056	+				+1.2
2,100,056	+				-0.4