Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS08065

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
1,765,735	+				-0.1
1,765,751	+				-1.2
1,765,751	+				-0.8
1,765,751	+				+0.0
1,765,751	+				-0.6
1,765,751	+				-0.6
1,765,751	+				-0.1
1,765,751	+				+1.6
1,765,752	-				-1.5
1,765,752	-				+0.7
1,765,752	-				-0.1
1,765,752	-				+0.6
1,765,752	-				+1.6
1,765,752	-				+1.2
1,765,752	-				-0.3
1,765,752	-				-0.1
1,765,790	+				+2.2
1,765,790	+				-0.2
1,765,791	-				+0.9
1,765,791	-				-1.3
1,765,791	-				-0.1
1,765,791	-				-1.8
1,765,797	+				-2.0
1,765,797	+				+1.8
1,765,798	-				+1.0
1,765,802	+				-0.3
1,765,802	+				+0.4
1,765,802	+				+3.2
1,765,802	+				+0.2
1,765,802	+				+1.2
1,765,802	+				+1.4
1,765,802	+				-1.3
1,765,802	+				+1.2
1,765,802	+				-0.3
1,765,802	+				-0.4
1,765,802	+				-1.6
1,765,802	+				-0.3
1,765,802	+				-0.4
1,765,802	+				-0.7
1,765,802	+				+0.4
1,765,802	+				+0.6
1,765,802	+				-2.3
1,765,802	+				-1.3
1,765,802	+				-1.5
1,765,802	+				-3.1
1,765,802	+				+1.2
1,765,802	+				+3.2
1,765,802	+				-1.3
1,765,803	-				-0.2
1,765,803	-				+0.9
1,765,803	-				-0.4
1,765,803	-				-2.0
1,765,803	-				+0.7
1,765,803	-				+1.2
1,765,803	-				-1.0
1,765,803	-				-0.4
1,765,803	-				+1.6
1,765,803	-				-1.3
1,765,803	-				-1.3
1,765,803	-				+0.0
1,765,803	-				-2.6
1,765,803	-				-0.5
1,765,803	-				-0.6
1,765,803	-				-1.5
1,765,803	-				+0.0
1,765,803	-				-0.5
1,765,803	-				+2.5
1,765,803	-				+0.9
1,765,803	-				-1.3
1,765,803	-				+0.2
1,765,803	-				+3.2
1,765,803	-				-0.6
1,765,803	-				-1.4
1,765,803	-				+0.4
1,765,803	-				+0.0
1,765,803	-				-1.7
1,765,803	-				+0.9
1,765,803	-				-0.4
1,765,803	-				+0.2
1,765,803	-				-1.6
1,765,993	+				-1.4
1,765,994	-				+0.9
1,765,994	-				+0.2
1,766,068	+				-1.4
1,766,068	+				+0.3
1,766,068	+				-0.5
1,766,068	+				+0.5
1,766,068	+				+0.6
1,766,068	+				-0.0
1,766,068	+				-1.7
1,766,068	+				-1.1
1,766,068	+				-0.4
1,766,068	+				+1.2
1,766,068	+				-2.4
1,766,068	+				-1.5
1,766,068	+				+1.6
1,766,068	+				+1.2
1,766,068	+				-2.7
1,766,068	+				-1.3
1,766,068	+				-0.4
1,766,068	+				-0.7
1,766,068	+				+0.0
1,766,068	+				-1.1
1,766,068	+				-0.5
1,766,068	+				-1.7
1,766,068	+				-0.4
1,766,068	+				-0.9
1,766,068	+				-0.7
1,766,068	+				+0.9
1,766,068	+				-0.8
1,766,068	+				-1.6
1,766,068	+				-0.5
1,766,069	-				+2.2
1,766,069	-				-0.7
1,766,069	-				-0.5
1,766,069	-				+0.1
1,766,069	-				-2.1
1,766,069	-				-0.3
1,766,069	-				-0.4
1,766,069	-				-1.2
1,766,069	-				+0.2
1,766,069	-				+0.4
1,766,069	-				-0.3
1,766,069	-				-2.2
1,766,069	-				-1.8
1,766,069	-				-1.4
1,766,069	-				-0.6
1,766,069	-				-0.9
1,766,069	-				-1.4
1,766,069	-				+1.2
1,766,069	-				-0.3
1,766,069	-				-0.1
1,766,069	-				+0.5
1,766,069	-				+0.0
1,766,069	-				+0.2
1,766,069	-				-2.2
1,766,069	-				-2.5
1,766,069	-				-0.3
1,766,069	-				+0.0
1,766,070	+				+2.2
1,766,070	+				-0.1
1,766,070	+				-0.3
1,766,070	+				-0.4
1,766,070	+				-1.2
1,766,070	+				-0.1
1,766,070	+				-1.4
1,766,070	+				-0.9
1,766,070	+				+3.2
1,766,070	+				-0.3
1,766,070	+				+0.2
1,766,071	-				-1.5
1,766,071	-				-0.3
1,766,071	-				-1.9
1,766,071	-				+0.9
1,766,165	+		LRK54_RS08060	0.20	-0.1
1,766,165	+		LRK54_RS08060	0.20	-0.6
1,766,165	+		LRK54_RS08060	0.20	+0.9
1,766,165	+		LRK54_RS08060	0.20	-1.2
1,766,165	+		LRK54_RS08060	0.20	+2.6
1,766,166	-		LRK54_RS08060	0.20	-1.8
1,766,166	-		LRK54_RS08060	0.20	+3.2
1,766,166	-		LRK54_RS08060	0.20	+0.9
1,766,166	-		LRK54_RS08060	0.20	-0.1
1,766,166	-		LRK54_RS08060	0.20	-0.1
1,766,166	-		LRK54_RS08060	0.20	-2.8
1,766,166	-		LRK54_RS08060	0.20	-2.8
1,766,242	-		LRK54_RS08060	0.31	-0.4
1,766,317	+		LRK54_RS08060	0.42	-0.4
1,766,317	+		LRK54_RS08060	0.42	-2.5
1,766,317	+		LRK54_RS08060	0.42	-1.5
1,766,318	-		LRK54_RS08060	0.42	+2.2
1,766,509	+		LRK54_RS08060	0.70	-1.0
1,766,510	-		LRK54_RS08060	0.70	-1.9
1,766,510	-		LRK54_RS08060	0.70	-1.9
1,766,572	+		LRK54_RS08060	0.79	-1.2
1,766,573	-		LRK54_RS08060	0.79	+0.5
1,766,667	+				+1.6
1,766,667	+				-1.4
1,766,667	+				-1.9
1,766,668	-				+0.4
1,766,686	+				-1.2
1,766,686	+				-0.3
1,766,686	+				-1.0
1,766,686	+				-1.1
1,766,686	+				-1.4
1,766,686	+				-1.3
1,766,686	+				+0.4
1,766,687	-				+1.6
1,766,687	-				-0.1
1,766,687	-				-3.1
1,766,687	-				-2.1
1,766,687	-				+1.6
1,766,687	-				-0.1
1,766,687	-				+1.4
1,766,687	-				+0.9
1,766,690	+				-1.1
1,766,690	+				+2.2
1,766,690	+				-2.3
1,766,690	+				+0.2
1,766,690	+				+0.4
1,766,690	+				-1.5
1,766,690	+				-1.8
1,766,690	+				-0.8
1,766,690	+				+1.6
1,766,690	+				+0.2
1,766,690	+				-0.4
1,766,690	+				-0.6
1,766,690	+				-1.0
1,766,690	+				-0.6
1,766,690	+				-0.8
1,766,690	+				-2.1
1,766,690	+				-2.3
1,766,690	+				-1.4
1,766,690	+				-0.5
1,766,691	-				-2.0
1,766,691	-				-1.0
1,766,691	-				-1.1
1,766,691	-				+1.1
1,766,691	-				+2.2
1,766,691	-				+0.9
1,766,691	-				-1.0
1,766,691	-				-1.4
1,766,691	-				+0.9
1,766,691	-				-1.1
1,766,691	-				-0.9
1,766,691	-				+3.2
1,766,691	-				+0.0
1,766,691	-				-0.5
1,766,691	-				-0.8
1,766,691	-				-0.5
1,766,691	-				-2.3
1,766,691	-				+0.5
1,766,832	+				+0.4
1,766,832	+				-0.8
1,766,833	-				-1.8
1,766,847	-				+0.2
1,766,854	+				-0.7
1,766,854	+				-0.4
1,766,855	-				-0.9
1,766,855	-				+1.4
1,766,855	-				-0.6
1,766,980	+		LRK54_RS08065	0.19	+0.4
1,766,980	+		LRK54_RS08065	0.19	+0.2
1,766,980	+		LRK54_RS08065	0.19	-0.3
1,766,980	+		LRK54_RS08065	0.19	-1.5
1,766,980	+		LRK54_RS08065	0.19	-1.3
1,766,980	+		LRK54_RS08065	0.19	+0.7
1,766,980	+		LRK54_RS08065	0.19	-3.3
1,766,980	+		LRK54_RS08065	0.19	-0.5
1,766,980	+		LRK54_RS08065	0.19	+0.6
1,766,981	-		LRK54_RS08065	0.19	+1.5
1,766,981	-		LRK54_RS08065	0.19	-0.7
1,766,981	-		LRK54_RS08065	0.19	+0.2
1,766,981	-		LRK54_RS08065	0.19	-1.9
1,767,075	+		LRK54_RS08065	0.26	-1.6
1,767,081	+		LRK54_RS08065	0.26	+2.2
1,767,081	+		LRK54_RS08065	0.26	-1.3
1,767,258	+		LRK54_RS08065	0.39	+0.2
1,767,259	-		LRK54_RS08065	0.39	-2.3
1,767,271	+		LRK54_RS08065	0.40	-1.4
1,767,272	-		LRK54_RS08065	0.40	-1.3
1,767,272	-		LRK54_RS08065	0.40	-0.6
1,767,272	-		LRK54_RS08065	0.40	-2.9
1,767,272	-		LRK54_RS08065	0.40	-1.2
1,767,347	+		LRK54_RS08065	0.46	-1.0
1,767,468	+		LRK54_RS08065	0.55	-1.0
1,767,468	+		LRK54_RS08065	0.55	-1.4
1,767,468	+		LRK54_RS08065	0.55	-1.0
1,767,468	+		LRK54_RS08065	0.55	-1.2
1,767,468	+		LRK54_RS08065	0.55	-1.3
1,767,469	-		LRK54_RS08065	0.55	-2.5
1,767,469	-		LRK54_RS08065	0.55	-0.5
1,767,469	-		LRK54_RS08065	0.55	-2.1
1,767,469	-		LRK54_RS08065	0.55	-0.7
1,767,469	-		LRK54_RS08065	0.55	-2.3
1,767,469	-		LRK54_RS08065	0.55	-1.0
1,767,469	-		LRK54_RS08065	0.55	-2.4
1,767,469	-		LRK54_RS08065	0.55	-1.5
1,767,585	+		LRK54_RS08065	0.63	+1.2
1,767,585	+		LRK54_RS08065	0.63	-1.2
1,767,585	+		LRK54_RS08065	0.63	+0.4
1,767,586	-		LRK54_RS08065	0.63	-0.8
1,767,702	-		LRK54_RS08065	0.72	-2.6
1,767,839	+		LRK54_RS08065	0.82	-1.4
1,767,839	+		LRK54_RS08065	0.82	-0.6
1,767,839	+		LRK54_RS08065	0.82	-0.8
1,767,839	+		LRK54_RS08065	0.82	-1.3
1,767,839	+		LRK54_RS08065	0.82	-1.1
1,767,840	-		LRK54_RS08065	0.82	-0.0
1,767,840	-		LRK54_RS08065	0.82	-1.0
1,767,840	-		LRK54_RS08065	0.82	-0.8
1,767,840	-		LRK54_RS08065	0.82	-2.1
1,767,840	-		LRK54_RS08065	0.82	+1.6
1,767,929	+		LRK54_RS08065	0.88	-1.5
1,767,929	+		LRK54_RS08065	0.88	-1.3
1,767,929	+		LRK54_RS08065	0.88	+0.0
1,767,929	+		LRK54_RS08065	0.88	-1.1
1,767,930	-		LRK54_RS08065	0.88	-0.4
1,767,930	-		LRK54_RS08065	0.88	-0.7
1,767,930	-		LRK54_RS08065	0.88	+0.6
1,767,930	-		LRK54_RS08065	0.88	+0.0
1,767,930	-		LRK54_RS08065	0.88	+0.0
1,767,930	-		LRK54_RS08065	0.88	-1.5
1,768,031	+				-1.0
1,768,032	-				-1.5
1,768,032	-				-1.6
1,768,090	+				-0.3
1,768,090	+				-1.0
1,768,091	-				-0.8
1,768,091	-				+0.0
1,768,091	-				+0.1
1,768,166	+				-0.1
1,768,167	-				-0.4
1,768,250	+		LRK54_RS08070	0.17	-0.4
1,768,250	+		LRK54_RS08070	0.17	-0.1
1,768,250	+		LRK54_RS08070	0.17	-0.4
1,768,250	+		LRK54_RS08070	0.17	-1.0
1,768,250	+		LRK54_RS08070	0.17	-0.7
1,768,250	+		LRK54_RS08070	0.17	-2.1
1,768,250	+		LRK54_RS08070	0.17	+0.5
1,768,250	+		LRK54_RS08070	0.17	+0.6
1,768,250	+		LRK54_RS08070	0.17	-2.6
1,768,250	+		LRK54_RS08070	0.17	-0.8
1,768,250	+		LRK54_RS08070	0.17	-0.4
1,768,250	+		LRK54_RS08070	0.17	-1.4
1,768,250	+		LRK54_RS08070	0.17	-1.7
1,768,250	+		LRK54_RS08070	0.17	-2.1
1,768,251	-		LRK54_RS08070	0.18	-0.9
1,768,251	-		LRK54_RS08070	0.18	-0.2
1,768,251	-		LRK54_RS08070	0.18	-0.8
1,768,251	-		LRK54_RS08070	0.18	-1.6
1,768,251	-		LRK54_RS08070	0.18	+0.4
1,768,251	-		LRK54_RS08070	0.18	-0.5
1,768,251	-		LRK54_RS08070	0.18	-0.3
1,768,251	-		LRK54_RS08070	0.18	-0.7
1,768,251	-		LRK54_RS08070	0.18	-1.3
1,768,251	-		LRK54_RS08070	0.18	+0.2
1,768,251	-		LRK54_RS08070	0.18	-0.9
1,768,251	-		LRK54_RS08070	0.18	-0.5
1,768,251	-		LRK54_RS08070	0.18	-0.5
1,768,251	-		LRK54_RS08070	0.18	+0.9
1,768,251	-		LRK54_RS08070	0.18	-1.0
1,768,251	-		LRK54_RS08070	0.18	-2.3
1,768,251	-		LRK54_RS08070	0.18	-1.9
1,768,251	-		LRK54_RS08070	0.18	+0.4
1,768,251	-		LRK54_RS08070	0.18	-0.9
1,768,251	-		LRK54_RS08070	0.18	+0.4
1,768,251	-		LRK54_RS08070	0.18	-1.1
1,768,451	+				+0.9
1,768,451	+				+0.4
1,768,451	+				-0.1
1,768,451	+				-1.6
1,768,451	+				-1.8
1,768,452	-				-1.5
1,768,519	+				+0.9
1,768,519	+				-0.8
1,768,520	-				-0.9
1,768,520	-				-0.7
1,768,589	-				-1.9
1,768,597	+				-1.8
1,768,597	+				-2.3
1,768,597	+				-0.1
1,768,597	+				-2.1
1,768,597	+				-1.4
1,768,597	+				-0.4
1,768,597	+				+0.0
1,768,597	+				-2.1
1,768,597	+				-1.2
1,768,597	+				-0.7
1,768,598	-				-0.6
1,768,598	-				-0.5
1,768,598	-				-1.0
1,768,598	-				-1.2
1,768,760	+		LRK54_RS08075	0.18	-0.4
1,768,760	+		LRK54_RS08075	0.18	+0.4
1,768,760	+		LRK54_RS08075	0.18	-3.1
1,768,760	+		LRK54_RS08075	0.18	-2.2
1,768,760	+		LRK54_RS08075	0.18	-2.5
1,768,761	-		LRK54_RS08075	0.18	+0.9
1,768,761	-		LRK54_RS08075	0.18	+3.2
1,768,761	-		LRK54_RS08075	0.18	-0.9
1,768,761	-		LRK54_RS08075	0.18	-0.1
1,768,889	+		LRK54_RS08075	0.42	-3.6
1,768,889	+		LRK54_RS08075	0.42	-1.7
1,768,889	+		LRK54_RS08075	0.42	-1.1
1,768,890	-		LRK54_RS08075	0.42	-1.4
1,768,890	-		LRK54_RS08075	0.42	-0.5
1,768,890	-		LRK54_RS08075	0.42	+0.9