Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07815

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
1,699,104	+		LRK54_RS07810	0.29	+2.2
1,699,105	+		LRK54_RS07810	0.29	-1.6
1,699,105	+		LRK54_RS07810	0.29	+0.7
1,699,105	+		LRK54_RS07810	0.29	-1.0
1,699,105	+		LRK54_RS07810	0.29	+0.0
1,699,105	+		LRK54_RS07810	0.29	-1.8
1,699,105	+		LRK54_RS07810	0.29	+1.6
1,699,105	+		LRK54_RS07810	0.29	-0.1
1,699,105	+		LRK54_RS07810	0.29	-1.0
1,699,105	+		LRK54_RS07810	0.29	-0.3
1,699,105	+		LRK54_RS07810	0.29	-1.0
1,699,105	+		LRK54_RS07810	0.29	-1.3
1,699,105	+		LRK54_RS07810	0.29	-0.9
1,699,105	+		LRK54_RS07810	0.29	-2.2
1,699,105	+		LRK54_RS07810	0.29	-0.2
1,699,106	-		LRK54_RS07810	0.29	+1.6
1,699,106	-		LRK54_RS07810	0.29	-0.1
1,699,106	-		LRK54_RS07810	0.29	-2.2
1,699,106	-		LRK54_RS07810	0.29	-0.5
1,699,106	-		LRK54_RS07810	0.29	-0.3
1,699,106	-		LRK54_RS07810	0.29	+1.0
1,699,106	-		LRK54_RS07810	0.29	+0.2
1,699,106	-		LRK54_RS07810	0.29	+2.2
1,699,106	-		LRK54_RS07810	0.29	+0.4
1,699,321	+		LRK54_RS07810	0.52	-0.7
1,699,321	+		LRK54_RS07810	0.52	+1.6
1,699,321	+		LRK54_RS07810	0.52	+0.6
1,699,321	+		LRK54_RS07810	0.52	-2.4
1,699,321	+		LRK54_RS07810	0.52	+1.0
1,699,321	+		LRK54_RS07810	0.52	-1.8
1,699,321	+		LRK54_RS07810	0.52	-1.7
1,699,322	-		LRK54_RS07810	0.52	+0.9
1,699,322	-		LRK54_RS07810	0.52	+0.6
1,699,322	-		LRK54_RS07810	0.52	-0.1
1,699,322	-		LRK54_RS07810	0.52	-2.4
1,699,322	-		LRK54_RS07810	0.52	+0.4
1,699,322	-		LRK54_RS07810	0.52	+0.7
1,699,393	+		LRK54_RS07810	0.59	+1.6
1,699,393	+		LRK54_RS07810	0.59	+2.2
1,699,393	+		LRK54_RS07810	0.59	-0.8
1,699,393	+		LRK54_RS07810	0.59	-0.7
1,699,393	+		LRK54_RS07810	0.59	+0.3
1,699,394	-		LRK54_RS07810	0.59	-1.6
1,699,394	-		LRK54_RS07810	0.59	+0.9
1,699,394	-		LRK54_RS07810	0.59	+1.6
1,699,394	-		LRK54_RS07810	0.59	+0.6
1,699,394	-		LRK54_RS07810	0.59	+1.6
1,699,401	+		LRK54_RS07810	0.60	+0.2
1,699,401	+		LRK54_RS07810	0.60	+1.6
1,699,401	+		LRK54_RS07810	0.60	-0.8
1,699,402	-		LRK54_RS07810	0.60	-0.7
1,699,402	-		LRK54_RS07810	0.60	-0.5
1,699,402	-		LRK54_RS07810	0.60	+0.4
1,699,402	-		LRK54_RS07810	0.60	-0.6
1,699,402	-		LRK54_RS07810	0.60	-0.6
1,699,402	-		LRK54_RS07810	0.60	-1.7
1,699,473	+		LRK54_RS07810	0.68	-0.5
1,699,473	+		LRK54_RS07810	0.68	+0.6
1,699,473	+		LRK54_RS07810	0.68	+0.0
1,699,473	+		LRK54_RS07810	0.68	+0.4
1,699,473	+		LRK54_RS07810	0.68	+0.4
1,699,473	+		LRK54_RS07810	0.68	+0.2
1,699,473	+		LRK54_RS07810	0.68	+1.6
1,699,473	+		LRK54_RS07810	0.68	-1.8
1,699,473	+		LRK54_RS07810	0.68	-1.3
1,699,473	+		LRK54_RS07810	0.68	-2.2
1,699,474	-		LRK54_RS07810	0.68	+1.2
1,699,474	-		LRK54_RS07810	0.68	-0.6
1,699,474	-		LRK54_RS07810	0.68	-1.1
1,699,474	-		LRK54_RS07810	0.68	-0.4
1,699,474	-		LRK54_RS07810	0.68	-0.4
1,699,474	-		LRK54_RS07810	0.68	+0.5
1,699,509	+		LRK54_RS07810	0.71	+0.9
1,699,509	+		LRK54_RS07810	0.71	-0.7
1,699,509	+		LRK54_RS07810	0.71	-0.1
1,699,509	+		LRK54_RS07810	0.71	+0.0
1,699,509	+		LRK54_RS07810	0.71	-2.0
1,699,509	+		LRK54_RS07810	0.71	+0.9
1,699,509	+		LRK54_RS07810	0.71	-0.5
1,699,509	+		LRK54_RS07810	0.71	+0.4
1,699,509	+		LRK54_RS07810	0.71	+1.2
1,699,510	-		LRK54_RS07810	0.72	-0.9
1,699,510	-		LRK54_RS07810	0.72	+2.2
1,699,510	-		LRK54_RS07810	0.72	+1.2
1,699,510	-		LRK54_RS07810	0.72	-0.4
1,699,510	-		LRK54_RS07810	0.72	-2.6
1,699,510	-		LRK54_RS07810	0.72	-3.3
1,699,510	-		LRK54_RS07810	0.72	-1.5
1,699,510	-		LRK54_RS07810	0.72	+1.6
1,699,510	-		LRK54_RS07810	0.72	-1.3
1,699,520	+		LRK54_RS07810	0.73	-1.7
1,699,520	+		LRK54_RS07810	0.73	+0.7
1,699,520	+		LRK54_RS07810	0.73	-1.3
1,699,521	-		LRK54_RS07810	0.73	-1.2
1,699,521	-		LRK54_RS07810	0.73	-1.3
1,699,521	-		LRK54_RS07810	0.73	-0.5
1,699,521	-		LRK54_RS07810	0.73	+0.4
1,699,521	-		LRK54_RS07810	0.73	+3.6
1,699,521	-		LRK54_RS07810	0.73	+0.4
1,699,581	+		LRK54_RS07810	0.79	-0.6
1,699,581	+		LRK54_RS07810	0.79	-1.0
1,699,581	+		LRK54_RS07810	0.79	-1.9
1,699,581	+		LRK54_RS07810	0.79	-1.3
1,699,581	+		LRK54_RS07810	0.79	+1.2
1,699,581	+		LRK54_RS07810	0.79	-0.5
1,699,581	+		LRK54_RS07810	0.79	-0.4
1,699,582	-		LRK54_RS07810	0.79	-0.1
1,699,582	-		LRK54_RS07810	0.79	-0.8
1,699,582	-		LRK54_RS07810	0.79	+0.9
1,699,582	-		LRK54_RS07810	0.79	-1.5
1,699,582	-		LRK54_RS07810	0.79	-0.3
1,699,582	-		LRK54_RS07810	0.79	-0.8
1,699,582	-		LRK54_RS07810	0.79	+1.8
1,699,641	+		LRK54_RS07810	0.85	+0.5
1,699,641	+		LRK54_RS07810	0.85	+1.6
1,699,642	-		LRK54_RS07810	0.85	+1.2
1,699,642	-		LRK54_RS07810	0.85	+1.6
1,699,642	-		LRK54_RS07810	0.85	+0.0
1,699,642	-		LRK54_RS07810	0.85	+0.6
1,699,663	+		LRK54_RS07810	0.88	-0.2
1,699,663	+		LRK54_RS07810	0.88	-1.6
1,699,664	-		LRK54_RS07810	0.88	-1.3
1,699,664	-		LRK54_RS07810	0.88	-1.2
1,699,790	+				-1.1
1,699,790	+				+1.4
1,699,790	+				-1.4
1,699,790	+				-0.3
1,699,790	+				+0.5
1,699,790	+				-1.8
1,699,790	+				-0.2
1,699,790	+				+0.6
1,699,790	+				+0.3
1,699,791	-				-2.0
1,699,791	-				-0.9
1,699,791	-				-1.8
1,699,791	-				-1.0
1,699,791	-				+1.9
1,699,874	+				-0.4
1,699,874	+				-2.5
1,699,874	+				-1.0
1,699,874	+				-3.0
1,699,874	+				-1.3
1,699,875	-				+1.2
1,699,875	-				-0.1
1,699,875	-				-0.1
1,699,875	-				+0.0
1,699,875	-				+0.4
1,699,875	-				-0.1
1,699,875	-				+0.3
1,699,875	-				-0.3
1,699,875	-				-1.6
1,699,875	-				+3.2
1,699,875	-				-0.8
1,700,196	+		LRK54_RS07815	0.25	-1.8
1,700,196	+		LRK54_RS07815	0.25	-1.3
1,700,196	+		LRK54_RS07815	0.25	-0.3
1,700,196	+		LRK54_RS07815	0.25	+0.9
1,700,196	+		LRK54_RS07815	0.25	-1.9
1,700,196	+		LRK54_RS07815	0.25	-2.3
1,700,196	+		LRK54_RS07815	0.25	-1.4
1,700,196	+		LRK54_RS07815	0.25	-1.9
1,700,196	+		LRK54_RS07815	0.25	+0.2
1,700,197	-		LRK54_RS07815	0.25	-1.7
1,700,197	-		LRK54_RS07815	0.25	-1.6
1,700,197	-		LRK54_RS07815	0.25	-0.1
1,700,197	-		LRK54_RS07815	0.25	-1.9
1,700,197	-		LRK54_RS07815	0.25	-1.8
1,700,197	-		LRK54_RS07815	0.25	-0.6
1,700,197	-		LRK54_RS07815	0.25	+0.4
1,700,197	-		LRK54_RS07815	0.25	-0.6
1,700,197	-		LRK54_RS07815	0.25	-1.5
1,700,197	-		LRK54_RS07815	0.25	+0.2
1,700,197	-		LRK54_RS07815	0.25	+0.1
1,700,197	-		LRK54_RS07815	0.25	-3.1
1,700,197	-		LRK54_RS07815	0.25	-1.3
1,700,197	-		LRK54_RS07815	0.25	+1.2
1,700,595	+		LRK54_RS07815	0.56	-0.5
1,700,595	+		LRK54_RS07815	0.56	-0.6
1,700,595	+		LRK54_RS07815	0.56	+1.4
1,700,595	+		LRK54_RS07815	0.56	+0.4
1,700,595	+		LRK54_RS07815	0.56	+0.4
1,700,596	-		LRK54_RS07815	0.56	-0.3
1,700,596	-		LRK54_RS07815	0.56	-0.1
1,700,596	-		LRK54_RS07815	0.56	-0.4
1,700,596	-		LRK54_RS07815	0.56	+1.2
1,700,596	-		LRK54_RS07815	0.56	+0.2
1,700,596	-		LRK54_RS07815	0.56	-0.7
1,700,596	-		LRK54_RS07815	0.56	-1.8
1,700,608	+		LRK54_RS07815	0.57	+2.2
1,700,764	+		LRK54_RS07815	0.69	-1.6
1,700,764	+		LRK54_RS07815	0.69	-0.9
1,700,765	-		LRK54_RS07815	0.69	-0.2
1,700,957	+		LRK54_RS07815	0.84	-0.3
1,700,957	+		LRK54_RS07815	0.84	-0.4
1,700,957	+		LRK54_RS07815	0.84	+0.6
1,700,958	-		LRK54_RS07815	0.84	+0.6
1,700,958	-		LRK54_RS07815	0.84	-2.1
1,701,308	+				-0.9
1,701,308	+				-1.5
1,701,308	+				-1.6
1,701,308	+				-2.4
1,701,308	+				-0.9
1,701,309	-				-0.3
1,701,309	-				+1.2
1,701,309	-				-0.3
1,701,320	+				+0.6
1,701,320	+				+1.6
1,701,320	+				+2.2
1,701,320	+				+1.2
1,701,320	+				+1.6
1,701,320	+				+0.9
1,701,321	-				+0.9
1,701,321	-				+0.0
1,701,321	-				-1.6
1,701,321	-				-2.4
1,701,321	-				-0.1
1,701,321	-				-1.0
1,701,321	-				-1.1
1,701,321	-				+0.5
1,701,321	-				-0.4
1,701,321	-				-0.5
1,701,321	-				+1.2
1,701,722	+		LRK54_RS07820	0.16	-0.7
1,701,722	+		LRK54_RS07820	0.16	-0.3
1,701,722	+		LRK54_RS07820	0.16	-1.5
1,701,722	+		LRK54_RS07820	0.16	-2.2
1,701,723	-		LRK54_RS07820	0.16	-0.5
1,701,723	-		LRK54_RS07820	0.16	+0.0
1,701,723	-		LRK54_RS07820	0.16	+0.9
1,701,723	-		LRK54_RS07820	0.16	-1.1
1,701,723	-		LRK54_RS07820	0.16	+0.6
1,701,743	+		LRK54_RS07820	0.17	+0.2
1,701,743	+		LRK54_RS07820	0.17	-1.3
1,701,743	+		LRK54_RS07820	0.17	+0.0
1,701,743	+		LRK54_RS07820	0.17	+2.2
1,701,743	+		LRK54_RS07820	0.17	-1.4
1,701,743	+		LRK54_RS07820	0.17	-1.9
1,701,743	+		LRK54_RS07820	0.17	+0.0
1,701,743	+		LRK54_RS07820	0.17	-1.1
1,701,743	+		LRK54_RS07820	0.17	+0.4
1,701,743	+		LRK54_RS07820	0.17	-0.4
1,701,743	+		LRK54_RS07820	0.17	+2.6
1,701,743	+		LRK54_RS07820	0.17	-1.8
1,701,743	+		LRK54_RS07820	0.17	+0.0
1,701,743	+		LRK54_RS07820	0.17	+0.6
1,701,743	+		LRK54_RS07820	0.17	-1.6
1,701,743	+		LRK54_RS07820	0.17	+0.0
1,701,743	+		LRK54_RS07820	0.17	+0.9
1,701,743	+		LRK54_RS07820	0.17	+0.0
1,701,743	+		LRK54_RS07820	0.17	+0.1
1,701,743	+		LRK54_RS07820	0.17	-1.0
1,701,743	+		LRK54_RS07820	0.17	-0.6
1,701,743	+		LRK54_RS07820	0.17	+0.1
1,701,743	+		LRK54_RS07820	0.17	-1.9
1,701,744	-		LRK54_RS07820	0.17	+1.3
1,701,744	-		LRK54_RS07820	0.17	-0.0
1,701,744	-		LRK54_RS07820	0.17	+0.1
1,701,744	-		LRK54_RS07820	0.17	-1.8
1,701,744	-		LRK54_RS07820	0.17	-0.9
1,701,744	-		LRK54_RS07820	0.17	+0.4
1,701,744	-		LRK54_RS07820	0.17	-0.6
1,701,744	-		LRK54_RS07820	0.17	-1.9
1,701,744	-		LRK54_RS07820	0.17	+1.6
1,701,744	-		LRK54_RS07820	0.17	-0.4
1,701,744	-		LRK54_RS07820	0.17	+0.9
1,701,744	-		LRK54_RS07820	0.17	+0.0
1,701,744	-		LRK54_RS07820	0.17	+0.6
1,701,744	-		LRK54_RS07820	0.17	-2.6
1,701,744	-		LRK54_RS07820	0.17	+0.9
1,701,744	-		LRK54_RS07820	0.17	+1.4
1,701,744	-		LRK54_RS07820	0.17	-0.9
1,701,744	-		LRK54_RS07820	0.17	+4.2
1,701,744	-		LRK54_RS07820	0.17	-0.6
1,701,744	-		LRK54_RS07820	0.17	-0.8
1,701,744	-		LRK54_RS07820	0.17	+1.0
1,701,744	-		LRK54_RS07820	0.17	-1.4
1,701,744	-		LRK54_RS07820	0.17	+0.9
1,701,744	-		LRK54_RS07820	0.17	+0.7
1,701,744	-		LRK54_RS07820	0.17	-0.4
1,701,744	-		LRK54_RS07820	0.17	+1.6
1,701,744	-		LRK54_RS07820	0.17	-0.9
1,701,744	-		LRK54_RS07820	0.17	+0.4
1,701,857	+		LRK54_RS07820	0.20	-0.5
1,701,858	-		LRK54_RS07820	0.20	-0.6
1,701,858	-		LRK54_RS07820	0.20	-1.1
1,701,917	+		LRK54_RS07820	0.22	-0.7
1,701,917	+		LRK54_RS07820	0.22	-1.2
1,701,917	+		LRK54_RS07820	0.22	+0.4
1,701,917	+		LRK54_RS07820	0.22	-0.1
1,701,917	+		LRK54_RS07820	0.22	+1.6
1,701,917	+		LRK54_RS07820	0.22	+0.6
1,701,917	+		LRK54_RS07820	0.22	+1.2
1,701,917	+		LRK54_RS07820	0.22	+0.0
1,701,917	+		LRK54_RS07820	0.22	+0.2
1,701,917	+		LRK54_RS07820	0.22	+0.4
1,701,917	+		LRK54_RS07820	0.22	-0.7
1,701,917	+		LRK54_RS07820	0.22	+0.2
1,701,918	-		LRK54_RS07820	0.22	-1.1
1,701,918	-		LRK54_RS07820	0.22	-0.5
1,701,918	-		LRK54_RS07820	0.22	+0.6
1,701,918	-		LRK54_RS07820	0.22	-1.6
1,701,918	-		LRK54_RS07820	0.22	-0.7
1,701,918	-		LRK54_RS07820	0.22	+1.6
1,701,918	-		LRK54_RS07820	0.22	-0.7
1,701,918	-		LRK54_RS07820	0.22	-1.6
1,701,918	-		LRK54_RS07820	0.22	+0.6
1,701,918	-		LRK54_RS07820	0.22	-0.4
1,701,918	-		LRK54_RS07820	0.22	+0.5
1,701,918	-		LRK54_RS07820	0.22	-1.4
1,702,097	+		LRK54_RS07820	0.28	-0.7
1,702,097	+		LRK54_RS07820	0.28	-0.2
1,702,097	+		LRK54_RS07820	0.28	-0.3
1,702,098	-		LRK54_RS07820	0.28	+2.2
1,702,115	+		LRK54_RS07820	0.28	-0.8
1,702,115	+		LRK54_RS07820	0.28	+0.6
1,702,115	+		LRK54_RS07820	0.28	-1.5
1,702,115	+		LRK54_RS07820	0.28	-2.8
1,702,115	+		LRK54_RS07820	0.28	-0.7
1,702,115	+		LRK54_RS07820	0.28	+1.9
1,702,115	+		LRK54_RS07820	0.28	+1.6
1,702,115	+		LRK54_RS07820	0.28	-1.5
1,702,115	+		LRK54_RS07820	0.28	+0.9
1,702,116	-		LRK54_RS07820	0.28	-1.1
1,702,116	-		LRK54_RS07820	0.28	-0.9
1,702,116	-		LRK54_RS07820	0.28	-1.0
1,702,116	-		LRK54_RS07820	0.28	+0.6
1,702,116	-		LRK54_RS07820	0.28	+0.9
1,702,116	-		LRK54_RS07820	0.28	-1.3
1,702,116	-		LRK54_RS07820	0.28	-0.7
1,702,116	-		LRK54_RS07820	0.28	+0.9
1,702,116	-		LRK54_RS07820	0.28	-2.7
1,702,116	-		LRK54_RS07820	0.28	+0.6
1,702,116	-		LRK54_RS07820	0.28	-1.5
1,702,151	+		LRK54_RS07820	0.29	-0.5
1,702,151	+		LRK54_RS07820	0.29	+2.1
1,702,151	+		LRK54_RS07820	0.29	-0.6
1,702,151	+		LRK54_RS07820	0.29	+1.2
1,702,152	-		LRK54_RS07820	0.29	-0.3
1,702,152	-		LRK54_RS07820	0.29	+0.4
1,702,152	-		LRK54_RS07820	0.29	+0.6
1,702,152	-		LRK54_RS07820	0.29	-1.0
1,702,152	-		LRK54_RS07820	0.29	-0.9
1,702,152	-		LRK54_RS07820	0.29	-0.6