Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS03625 and LRK54_RS03630 are separated by 3 nucleotides LRK54_RS03630 and LRK54_RS03635 are separated by 296 nucleotides LRK54_RS03635 and LRK54_RS03640 are separated by 7 nucleotides LRK54_RS03640 and LRK54_RS03645 are separated by 81 nucleotides LRK54_RS03645 and LRK54_RS03650 are separated by 106 nucleotides
LRK54_RS03625: LRK54_RS03625 - 50S ribosomal protein L1, at 774,477 to 775,181
_RS03625
LRK54_RS03630: LRK54_RS03630 - 50S ribosomal protein L11, at 775,185 to 775,613
_RS03630
LRK54_RS03635: LRK54_RS03635 - transcription termination/antitermination protein NusG, at 775,910 to 776,470
_RS03635
LRK54_RS03640: LRK54_RS03640 - preprotein translocase subunit SecE, at 776,478 to 776,873
_RS03640
LRK54_RS03645: LRK54_RS03645 - tRNA-Trp, at 776,955 to 777,030
_RS03645
LRK54_RS03650: LRK54_RS03650 - elongation factor Tu, at 777,137 to 778,327
_RS03650
Position (kb)
775
776
777 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 775.711 kb on - strand at 775.711 kb on - strand at 775.711 kb on - strand at 775.711 kb on - strand at 775.750 kb on - strand at 775.752 kb on - strand at 775.752 kb on - strand at 775.760 kb on - strand at 775.871 kb on + strand at 775.871 kb on + strand at 775.871 kb on + strand at 775.872 kb on - strand at 775.872 kb on - strand at 775.883 kb on + strand at 775.884 kb on - strand at 777.043 kb on - strand at 777.043 kb on - strand at 777.043 kb on - strand at 777.043 kb on - strand at 777.043 kb on - strand at 777.050 kb on - strand at 777.050 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.064 kb on - strand at 777.107 kb on - strand at 777.107 kb on - strand at 777.107 kb on - strand at 777.121 kb on - strand at 777.121 kb on - strand at 777.121 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.135 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand at 777.139 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM remove 775,711 - +0.7 775,711 - -1.0 775,711 - +1.2 775,711 - +1.2 775,750 - -1.1 775,752 - +1.6 775,752 - -0.5 775,760 - -0.3 775,871 + +0.1 775,871 + +0.9 775,871 + -0.5 775,872 - +0.1 775,872 - -0.4 775,883 + -0.6 775,884 - -2.3 777,043 - -1.9 777,043 - -0.8 777,043 - +1.8 777,043 - +2.2 777,043 - +1.2 777,050 - -1.8 777,050 - -2.0 777,064 - -0.1 777,064 - +0.7 777,064 - +1.6 777,064 - -1.1 777,064 - -0.5 777,064 - +0.5 777,064 - -1.0 777,107 - -0.7 777,107 - -1.9 777,107 - -2.2 777,121 - -0.0 777,121 - +0.2 777,121 - +1.6 777,135 - -0.3 777,135 - -1.2 777,135 - -0.8 777,135 - +0.0 777,135 - +2.4 777,135 - +1.0 777,135 - -1.0 777,135 - +0.6 777,135 - +0.5 777,135 - +1.0 777,135 - +0.9 777,135 - -1.1 777,135 - +1.2 777,135 - +1.2 777,135 - -0.9 777,135 - -0.4 777,139 - -0.1 777,139 - -0.1 777,139 - +0.0 777,139 - -1.4 777,139 - -0.3 777,139 - +0.6 777,139 - +3.0 777,139 - +0.9 777,139 - +0.4 777,139 - +2.9 777,139 - -1.1
Or see this region's nucleotide sequence