Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00750

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
161,400	-		LRK54_RS00745	0.73	+1.6
161,400	-		LRK54_RS00745	0.73	-2.6
161,400	-		LRK54_RS00745	0.73	-1.1
161,408	+		LRK54_RS00745	0.74	-1.3
161,408	+		LRK54_RS00745	0.74	-0.4
161,408	+		LRK54_RS00745	0.74	+0.1
161,408	+		LRK54_RS00745	0.74	-1.3
161,408	+		LRK54_RS00745	0.74	-0.3
161,409	-		LRK54_RS00745	0.74	-0.5
161,409	-		LRK54_RS00745	0.74	-0.6
161,409	-		LRK54_RS00745	0.74	-1.9
161,433	+		LRK54_RS00745	0.75	-1.1
161,433	+		LRK54_RS00745	0.75	-1.6
161,433	+		LRK54_RS00745	0.75	-0.2
161,434	-		LRK54_RS00745	0.75	+1.0
161,435	+		LRK54_RS00745	0.75	-1.4
161,435	+		LRK54_RS00745	0.75	+0.8
161,435	+		LRK54_RS00745	0.75	-0.0
161,435	+		LRK54_RS00745	0.75	-1.9
161,435	+		LRK54_RS00745	0.75	+0.8
161,435	+		LRK54_RS00745	0.75	+1.6
161,435	+		LRK54_RS00745	0.75	-1.4
161,435	+		LRK54_RS00745	0.75	-2.5
161,435	+		LRK54_RS00745	0.75	-1.9
161,435	+		LRK54_RS00745	0.75	-1.1
161,435	+		LRK54_RS00745	0.75	-1.0
161,435	+		LRK54_RS00745	0.75	-2.6
161,435	+		LRK54_RS00745	0.75	-0.6
161,435	+		LRK54_RS00745	0.75	+2.9
161,435	+		LRK54_RS00745	0.75	-1.5
161,436	-		LRK54_RS00745	0.75	+0.8
161,436	-		LRK54_RS00745	0.75	-1.3
161,436	-		LRK54_RS00745	0.75	-1.7
161,436	-		LRK54_RS00745	0.75	-0.5
161,436	-		LRK54_RS00745	0.75	+0.1
161,436	-		LRK54_RS00745	0.75	-1.5
161,436	-		LRK54_RS00745	0.75	+1.6
161,436	-		LRK54_RS00745	0.75	-2.1
161,436	-		LRK54_RS00745	0.75	-0.6
161,436	-		LRK54_RS00745	0.75	+0.8
161,436	-		LRK54_RS00745	0.75	-0.2
161,436	-		LRK54_RS00745	0.75	-1.1
161,436	-		LRK54_RS00745	0.75	-0.7
161,436	-		LRK54_RS00745	0.75	-0.2
161,436	-		LRK54_RS00745	0.75	-1.2
161,492	+		LRK54_RS00745	0.78	+0.8
161,492	+		LRK54_RS00745	0.78	-0.5
161,492	+		LRK54_RS00745	0.78	+0.2
161,492	+		LRK54_RS00745	0.78	+0.2
161,492	+		LRK54_RS00745	0.78	-0.0
161,492	+		LRK54_RS00745	0.78	-0.9
161,492	+		LRK54_RS00745	0.78	-2.1
161,492	+		LRK54_RS00745	0.78	+0.6
161,492	+		LRK54_RS00745	0.78	-0.4
161,492	+		LRK54_RS00745	0.78	-0.3
161,492	+		LRK54_RS00745	0.78	+1.4
161,492	+		LRK54_RS00745	0.78	-1.3
161,492	+		LRK54_RS00745	0.78	+0.6
161,492	+		LRK54_RS00745	0.78	-0.7
161,493	-		LRK54_RS00745	0.78	-1.9
161,493	-		LRK54_RS00745	0.78	-1.1
161,493	-		LRK54_RS00745	0.78	+0.1
161,493	-		LRK54_RS00745	0.78	+1.4
161,493	-		LRK54_RS00745	0.78	+0.6
161,493	-		LRK54_RS00745	0.78	-0.7
161,493	-		LRK54_RS00745	0.78	-2.4
161,493	-		LRK54_RS00745	0.78	-1.1
161,493	-		LRK54_RS00745	0.78	+0.6
161,493	-		LRK54_RS00745	0.78	+0.1
161,493	-		LRK54_RS00745	0.78	-0.0
161,493	-		LRK54_RS00745	0.78	+2.3
161,618	+		LRK54_RS00745	0.86	-2.0
161,618	+		LRK54_RS00745	0.86	-1.0
161,619	-		LRK54_RS00745	0.86	+0.6
161,619	-		LRK54_RS00745	0.86	+1.6
161,619	-		LRK54_RS00745	0.86	-2.1
161,619	-		LRK54_RS00745	0.86	+1.1
161,619	-		LRK54_RS00745	0.86	-0.4
161,619	-		LRK54_RS00745	0.86	-1.0
161,651	+		LRK54_RS00745	0.88	-1.8
161,651	+		LRK54_RS00745	0.88	+1.1
161,651	+		LRK54_RS00745	0.88	-0.4
161,651	+		LRK54_RS00745	0.88	-1.5
161,651	+		LRK54_RS00745	0.88	-0.7
161,651	+		LRK54_RS00745	0.88	-1.8
161,652	-		LRK54_RS00745	0.88	+0.2
161,652	-		LRK54_RS00745	0.88	-0.1
161,652	-		LRK54_RS00745	0.88	+0.3
161,652	-		LRK54_RS00745	0.88	-0.7
161,652	-		LRK54_RS00745	0.88	-0.0
161,652	-		LRK54_RS00745	0.88	-0.9
161,823	+				+1.0
161,824	-				+1.1
161,852	+				-0.3
161,875	+				+0.1
161,875	+				-1.1
161,875	+				+2.1
161,875	+				+0.4
161,875	+				+1.8
161,875	+				+1.6
161,875	+				-2.1
161,875	+				+0.4
161,875	+				+1.1
161,875	+				-1.3
161,875	+				+1.6
161,875	+				-1.8
161,875	+				+1.8
161,875	+				-0.4
161,875	+				-1.2
161,876	-				-1.4
161,876	-				+1.8
161,876	-				-2.2
161,876	-				-1.2
161,876	-				-0.8
161,876	-				+0.3
161,876	-				+3.1
161,876	-				+0.3
161,876	-				+0.6
161,876	-				-1.6
161,876	-				-0.1
161,876	-				-1.5
161,876	-				-0.6
161,876	-				+1.0
161,980	+				+1.1
161,981	+				-2.4
161,981	+				-1.2
161,981	+				-0.5
161,981	+				+0.1
161,981	+				+1.1
161,981	+				-0.3
161,981	+				-1.5
161,981	+				+1.1
161,981	+				-0.9
161,981	+				+1.1
161,981	+				+1.6
161,981	+				-0.9
161,981	+				-1.3
161,981	+				+0.0
161,981	+				-1.0
161,982	-				-0.9
161,982	-				+0.1
161,982	-				+0.6
161,982	-				-1.5
161,982	-				+0.1
161,982	-				-0.7
161,982	-				-0.9
161,982	-				+0.3
161,982	-				-0.0
161,982	-				-1.9
161,982	-				-0.9
161,982	-				+1.6
161,982	-				+2.5
161,982	-				+2.1
161,982	-				-2.6
161,982	-				-1.3
161,982	-				+1.1
161,982	-				-1.3
161,982	-				-0.8
161,982	-				-0.0
161,982	-				+0.1
161,982	-				-0.6
161,982	-				-0.5
161,982	-				-0.4
162,008	+				+0.8
162,009	-				-0.3
162,009	-				+1.6
162,009	-				+0.3
162,053	+				+0.3
162,053	+				-0.4
162,054	-				+0.7
162,181	+		LRK54_RS00750	0.17	-0.2
162,181	+		LRK54_RS00750	0.17	+0.1
162,182	-		LRK54_RS00750	0.18	-2.0
162,182	-		LRK54_RS00750	0.18	-0.4
162,723	+				-2.1
162,723	+				-0.3
162,723	+				+3.1
162,723	+				+1.6
162,723	+				-0.8
162,723	+				-0.9
162,723	+				-0.0
162,724	-				+0.2
162,724	-				-2.4
162,724	-				-0.8
162,724	-				-2.1
162,724	-				-0.6
162,724	-				-1.0
162,724	-				+2.1
162,724	-				-1.0
162,724	-				+0.6
162,724	-				-0.2
162,724	-				-2.1
162,724	-				-0.0
162,724	-				+0.3
162,724	-				+1.6
162,724	-				+0.1
162,724	-				-1.3
162,724	-				+1.8
162,724	-				-0.6
162,724	-				+1.1
162,724	-				+1.8
162,768	-				-0.8
162,768	-				+1.0
162,836	+				-0.8
162,836	+				+0.6
162,836	+				-0.3
162,836	+				+3.1
162,836	+				-0.2
162,836	+				+0.3
162,836	+				-1.0
162,836	+				-0.9
162,836	+				+0.1
162,836	+				-0.9
162,836	+				-1.1
162,836	+				-2.7
162,836	+				+0.6
162,836	+				+0.1
162,836	+				-0.3
162,836	+				-0.2
162,836	+				-2.0
162,836	+				-3.2
162,837	-				-0.6
162,837	-				+1.0
162,837	-				-0.5
162,837	-				+0.3
162,837	-				+0.3
162,837	-				-1.1
162,837	-				+0.1
162,837	-				-0.3
162,837	-				-0.3
162,837	-				+0.4
162,837	-				+1.6
162,837	-				-0.6
162,837	-				-2.1
162,837	-				-0.5
162,837	-				+1.1
162,946	+				-1.0
162,946	+				+1.1
162,946	+				-1.8
162,946	+				-0.6
162,946	+				+0.6
162,946	+				-1.3
162,946	+				-0.0
162,946	+				-0.3
162,946	+				+0.8
162,946	+				-0.0
162,946	+				-3.7
162,946	+				+0.3
162,946	+				+1.6
162,946	+				+0.0
162,946	+				+0.6
162,946	+				-1.2
162,946	+				+0.1
162,946	+				-1.4
162,946	+				-1.6
162,946	+				-2.8
162,947	-				-0.6
162,947	-				-1.0
162,947	-				+0.2
162,947	-				+0.9
162,947	-				-0.3
162,947	-				-0.9
162,947	-				+1.3
162,947	-				+0.7
162,947	-				-0.0
162,947	-				+1.1
162,947	-				+0.8
162,947	-				-0.7
162,947	-				-1.9
162,947	-				-1.5
162,947	-				+0.3
163,202	+		LRK54_RS00755	0.13	-0.9
163,202	+		LRK54_RS00755	0.13	+0.6
163,202	+		LRK54_RS00755	0.13	-0.2
163,202	+		LRK54_RS00755	0.13	-0.3
163,202	+		LRK54_RS00755	0.13	+0.8
163,202	+		LRK54_RS00755	0.13	-0.6
163,202	+		LRK54_RS00755	0.13	+0.6
163,203	-		LRK54_RS00755	0.13	+0.6
163,203	-		LRK54_RS00755	0.13	+1.6
163,203	-		LRK54_RS00755	0.13	+0.6
163,203	-		LRK54_RS00755	0.13	-1.7
163,203	-		LRK54_RS00755	0.13	-0.1
163,203	-		LRK54_RS00755	0.13	+1.1
163,203	-		LRK54_RS00755	0.13	-1.1
163,203	-		LRK54_RS00755	0.13	-1.2
163,524	+		LRK54_RS00755	0.23	+1.8
163,524	+		LRK54_RS00755	0.23	-0.9
163,524	+		LRK54_RS00755	0.23	+1.1
163,525	-		LRK54_RS00755	0.23	+1.8