Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4188

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,337,622	+		Ga0059261_4187	0.34	-2.9
4,337,622	+		Ga0059261_4187	0.34	-1.1
4,337,622	+		Ga0059261_4187	0.34	-2.5
4,337,622	+		Ga0059261_4187	0.34	-2.7
4,337,622	+		Ga0059261_4187	0.34	-2.5
4,337,622	+		Ga0059261_4187	0.34	-1.7
4,337,623	-		Ga0059261_4187	0.34	-2.1
4,337,623	-		Ga0059261_4187	0.34	-1.8
4,337,623	-		Ga0059261_4187	0.34	-1.1
4,337,623	-		Ga0059261_4187	0.34	-0.9
4,337,623	-		Ga0059261_4187	0.34	+0.9
4,337,623	-		Ga0059261_4187	0.34	-1.9
4,337,623	-		Ga0059261_4187	0.34	-3.0
4,337,623	-		Ga0059261_4187	0.34	-2.7
4,337,623	-		Ga0059261_4187	0.34	-2.1
4,337,653	+		Ga0059261_4187	0.36	-1.8
4,337,654	-		Ga0059261_4187	0.36	-2.0
4,337,654	-		Ga0059261_4187	0.36	+1.4
4,337,690	+		Ga0059261_4187	0.39	-2.3
4,337,690	+		Ga0059261_4187	0.39	+1.9
4,337,691	-		Ga0059261_4187	0.39	-2.1
4,337,710	+		Ga0059261_4187	0.40	-0.7
4,337,711	-		Ga0059261_4187	0.40	-2.7
4,337,711	-				-0.1
4,337,770	+		Ga0059261_4187	0.44	+0.3
4,337,770	+		Ga0059261_4187	0.44	-0.9
4,337,771	-		Ga0059261_4187	0.44	-3.1
4,337,817	+		Ga0059261_4187	0.47	-1.5
4,337,895	+		Ga0059261_4187	0.52	-2.7
4,337,925	+		Ga0059261_4187	0.54	-2.1
4,337,925	+		Ga0059261_4187	0.54	-1.9
4,337,930	+		Ga0059261_4187	0.55	-1.1
4,337,930	+		Ga0059261_4187	0.55	-0.7
4,337,930	+		Ga0059261_4187	0.55	-0.7
4,337,930	+		Ga0059261_4187	0.55	-1.1
4,337,930	+		Ga0059261_4187	0.55	-2.0
4,337,930	+		Ga0059261_4187	0.55	-1.0
4,337,930	+		Ga0059261_4187	0.55	-2.2
4,337,930	+		Ga0059261_4187	0.55	-2.1
4,337,931	-		Ga0059261_4187	0.55	-2.1
4,337,931	-		Ga0059261_4187	0.55	-1.7
4,337,931	-		Ga0059261_4187	0.55	+0.5
4,337,931	-		Ga0059261_4187	0.55	-2.9
4,337,977	+		Ga0059261_4187	0.58	-0.9
4,337,987	-		Ga0059261_4187	0.58	-3.2
4,337,987	-		Ga0059261_4187	0.58	-1.5
4,338,016	+		Ga0059261_4187	0.60	-0.9
4,338,016	+		Ga0059261_4187	0.60	-2.6
4,338,017	-		Ga0059261_4187	0.60	-2.5
4,338,017	-		Ga0059261_4187	0.60	-2.7
4,338,169	+				-1.1
4,338,229	+		Ga0059261_4187	0.74	-1.5
4,338,536	-				-2.2
4,338,536	-				-0.9
4,338,536	-				-1.5
4,338,536	-				-1.9
4,338,639	+				-1.5
4,338,760	+		Ga0059261_4188	0.12	-1.1
4,338,761	-		Ga0059261_4188	0.12	-1.5
4,338,829	+		Ga0059261_4188	0.18	+0.1
4,339,043	+		Ga0059261_4188	0.35	-0.1
4,339,044	-				+0.9
4,339,069	+		Ga0059261_4188	0.37	-0.3
4,339,069	+		Ga0059261_4188	0.37	-2.5
4,339,205	+		Ga0059261_4188	0.48	+0.9
4,339,205	+		Ga0059261_4188	0.48	-2.5
4,339,205	+		Ga0059261_4188	0.48	-1.5
4,339,206	-		Ga0059261_4188	0.49	-1.5
4,339,206	-		Ga0059261_4188	0.49	-1.3
4,339,206	-		Ga0059261_4188	0.49	-1.2
4,339,206	-		Ga0059261_4188	0.49	-2.0
4,339,206	-		Ga0059261_4188	0.49	-1.7
4,339,206	-		Ga0059261_4188	0.49	-1.1
4,339,206	-		Ga0059261_4188	0.49	-1.1
4,339,347	+				-0.7
4,339,361	+		Ga0059261_4188	0.61	-2.1
4,339,468	+		Ga0059261_4188	0.70	-1.0
4,339,488	+		Ga0059261_4188	0.72	-0.7
4,339,489	-		Ga0059261_4188	0.72	-2.9
4,339,489	-		Ga0059261_4188	0.72	-3.7
4,339,489	-		Ga0059261_4188	0.72	-1.5
4,339,489	-		Ga0059261_4188	0.72	-1.1
4,339,489	-		Ga0059261_4188	0.72	-2.1
4,339,489	-		Ga0059261_4188	0.72	-2.8
4,339,597	+		Ga0059261_4188	0.80	-1.7
4,339,608	+		Ga0059261_4188	0.81	-2.6
4,339,608	+		Ga0059261_4188	0.81	-0.7
4,339,608	+		Ga0059261_4188	0.81	-2.1
4,339,609	-		Ga0059261_4188	0.81	-2.6
4,339,747	+				-1.5
4,339,747	+				-1.7
4,339,748	-				-1.3
4,339,748	-				-1.9
4,339,764	+				-2.1
4,339,765	-				+0.9
4,339,765	-				-1.1
4,339,864	+				+1.0
4,339,864	+				-0.3
4,339,864	+				+0.9
4,339,864	+				+0.9
4,339,865	-				+0.3
4,339,865	-				-0.5
4,339,865	-				+0.4
4,339,865	-				-0.1
4,339,967	+		Ga0059261_4189	0.30	+0.3
4,340,083	+		Ga0059261_4189	0.57	+0.2
4,340,084	-		Ga0059261_4189	0.57	-0.2
4,340,099	+		Ga0059261_4189	0.60	+0.5
4,340,099	+		Ga0059261_4189	0.60	+0.5
4,340,099	+		Ga0059261_4189	0.60	+0.3
4,340,099	+				-0.1
4,340,100	-		Ga0059261_4189	0.61	+0.1
4,340,180	+		Ga0059261_4189	0.79	-0.3
4,340,180	+		Ga0059261_4189	0.79	+0.1
4,340,180	+		Ga0059261_4189	0.79	-0.6
4,340,180	+		Ga0059261_4189	0.79	-1.0
4,340,180	+		Ga0059261_4189	0.79	+0.0
4,340,180	+		Ga0059261_4189	0.79	+0.7
4,340,181	-		Ga0059261_4189	0.79	+0.6
4,340,181	-		Ga0059261_4189	0.79	+0.1
4,340,181	-		Ga0059261_4189	0.79	-0.1
4,340,248	+				-2.1
4,340,249	-				-0.7
4,340,249	-				+0.3
4,340,251	+				+0.2
4,340,251	+				+0.1
4,340,251	+				+0.9
4,340,251	+				+0.2
4,340,251	+				+0.2
4,340,252	-				+0.6
4,340,252	-				+0.4
4,340,252	-				-1.0
4,340,252	-				-0.0
4,340,252	-				-0.4
4,340,252	-				+0.3
4,340,252	-				-0.4
4,340,252	-				+0.2
4,340,252	-				-0.1
4,340,403	+				+0.2
4,340,403	+				-0.5
4,340,403	+				+0.7
4,340,403	+				+0.0
4,340,404	-				+0.7
4,340,404	-				-0.1
4,340,404	-				-0.0
4,340,405	+				+0.4
4,340,405	+				-0.2
4,340,405	+				-0.4
4,340,405	+				+0.3
4,340,405	+				-2.3
4,340,405	+				+0.9
4,340,406	-				-0.1
4,340,406	-				-0.8
4,340,406	-				-0.0
4,340,406	-				-0.6
4,340,406	-				-0.5
4,340,406	-				+0.4
4,340,406	-				-0.1
4,340,406	-				+1.0
4,340,465	+				+1.1
4,340,465	+				+0.4
4,340,466	-				-0.4
4,340,466	-				-1.2
4,340,509	+				+0.2
4,340,510	-				-0.4
4,340,515	+				-0.3
4,340,523	+				-0.4
4,340,524	-				-0.4
4,340,524	-				-0.3
4,340,524	-				-0.4
4,340,524	-				+0.0
4,340,524	-				+1.1
4,340,529	+				+0.5
4,340,530	-				-0.1
4,340,552	+				+0.3
4,340,552	+				+0.3
4,340,552	+				-0.3
4,340,552	+				+0.9
4,340,552	+				+0.4
4,340,553	-				+0.5
4,340,553	-				-0.5
4,340,553	-				-0.1
4,340,553	-				+0.2
4,340,620	+				+0.9
4,340,621	-				-0.6
4,340,621	-				-1.7
4,340,621	-				-0.2
4,340,621	-				+0.9
4,340,621	-				-0.1
4,340,621	-				+0.5
4,340,686	+		Ga0059261_4190	0.12	+0.3
4,340,687	-		Ga0059261_4190	0.13	+0.0
4,340,710	+		Ga0059261_4190	0.16	-0.0
4,340,710	+		Ga0059261_4190	0.16	+0.1
4,340,710	+		Ga0059261_4190	0.16	-0.7
4,340,710	+		Ga0059261_4190	0.16	+1.3
4,340,711	-		Ga0059261_4190	0.16	-0.5
4,340,711	-		Ga0059261_4190	0.16	-0.2
4,340,711	-		Ga0059261_4190	0.16	+0.1
4,340,747	+		Ga0059261_4190	0.22	-0.1
4,340,747	+		Ga0059261_4190	0.22	-0.0
4,340,747	+		Ga0059261_4190	0.22	+0.1
4,340,747	+		Ga0059261_4190	0.22	-0.2
4,340,747	+		Ga0059261_4190	0.22	-0.3
4,340,747	+		Ga0059261_4190	0.22	-0.6
4,340,747	+		Ga0059261_4190	0.22	+0.8
4,340,748	-		Ga0059261_4190	0.22	-0.0
4,340,748	-		Ga0059261_4190	0.22	-0.5
4,340,748	-		Ga0059261_4190	0.22	+0.9
4,340,748	-		Ga0059261_4190	0.22	-0.3
4,340,748	-		Ga0059261_4190	0.22	-1.1
4,340,748	-		Ga0059261_4190	0.22	+0.4
4,340,784	+		Ga0059261_4190	0.28	+1.0
4,340,785	-		Ga0059261_4190	0.28	-0.6