Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4055

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,180,114	+		Ga0059261_4052	0.78	-0.1
4,180,114	+		Ga0059261_4052	0.78	-0.0
4,180,114	+		Ga0059261_4052	0.78	+0.3
4,180,114	+		Ga0059261_4052	0.78	-1.4
4,180,114	+		Ga0059261_4052	0.78	-0.1
4,180,114	+		Ga0059261_4052	0.78	+0.7
4,180,114	+		Ga0059261_4052	0.78	+0.0
4,180,115	-		Ga0059261_4052	0.78	+0.6
4,180,115	-		Ga0059261_4052	0.78	+0.9
4,180,115	-		Ga0059261_4052	0.78	-0.2
4,180,115	-		Ga0059261_4052	0.78	-1.5
4,180,120	+		Ga0059261_4052	0.78	+0.9
4,180,120	+		Ga0059261_4052	0.78	+0.0
4,180,120	+		Ga0059261_4052	0.78	+0.0
4,180,120	+		Ga0059261_4052	0.78	-0.3
4,180,120	+		Ga0059261_4052	0.78	+0.0
4,180,121	-		Ga0059261_4052	0.79	+0.1
4,180,121	-		Ga0059261_4052	0.79	+0.4
4,180,121	-		Ga0059261_4052	0.79	+0.2
4,180,121	-		Ga0059261_4052	0.79	-0.2
4,180,121	-				+1.9
4,180,249	+		Ga0059261_4052	0.90	-0.9
4,180,249	+		Ga0059261_4052	0.90	+0.3
4,180,249	+		Ga0059261_4052	0.90	-0.7
4,180,250	-		Ga0059261_4052	0.90	+0.9
4,180,251	+		Ga0059261_4052	0.90	+0.2
4,180,251	+		Ga0059261_4052	0.90	-1.1
4,180,251	+		Ga0059261_4052	0.90	-0.5
4,180,251	+		Ga0059261_4052	0.90	-0.7
4,180,251	+		Ga0059261_4052	0.90	-0.1
4,180,252	-		Ga0059261_4052	0.90	+0.1
4,180,509	+		Ga0059261_4053	0.41	+0.5
4,180,509	+		Ga0059261_4053	0.41	+0.5
4,180,509	+		Ga0059261_4053	0.41	+0.3
4,180,510	-		Ga0059261_4053	0.42	+0.6
4,180,510	-		Ga0059261_4053	0.42	-1.1
4,180,715	+				-0.5
4,180,715	+				+0.3
4,180,715	+				+0.1
4,180,715	+				-0.1
4,180,716	-				+1.2
4,180,716	-				+0.3
4,180,716	-				-0.6
4,180,916	+		Ga0059261_4054	0.60	-0.6
4,180,917	-		Ga0059261_4054	0.60	+1.1
4,180,917	-		Ga0059261_4054	0.60	-0.7
4,180,998	-		Ga0059261_4054	0.84	-0.1
4,180,998	-		Ga0059261_4054	0.84	+0.1
4,181,028	+				-1.0
4,181,028	+				-0.7
4,181,029	-				-0.4
4,181,029	-				-2.2
4,181,029	-				+0.1
4,181,029	-				-0.5
4,181,029	-				-0.1
4,181,350	+		Ga0059261_4055	0.16	-0.5
4,181,350	+		Ga0059261_4055	0.16	-1.5
4,181,350	+		Ga0059261_4055	0.16	-0.7
4,181,350	+		Ga0059261_4055	0.16	+0.1
4,181,350	+		Ga0059261_4055	0.16	-0.5
4,181,350	+		Ga0059261_4055	0.16	-0.5
4,181,350	+		Ga0059261_4055	0.16	-0.6
4,181,350	+		Ga0059261_4055	0.16	+0.1
4,181,350	+		Ga0059261_4055	0.16	-0.1
4,181,350	+		Ga0059261_4055	0.16	+0.1
4,181,351	-		Ga0059261_4055	0.16	-1.3
4,181,351	-		Ga0059261_4055	0.16	+1.4
4,181,351	-		Ga0059261_4055	0.16	-0.6
4,181,351	-		Ga0059261_4055	0.16	+0.9
4,181,351	-		Ga0059261_4055	0.16	+1.0
4,181,455	+		Ga0059261_4055	0.22	-0.4
4,181,455	+		Ga0059261_4055	0.22	+0.1
4,181,455	+		Ga0059261_4055	0.22	-0.5
4,181,456	-		Ga0059261_4055	0.22	+0.0
4,181,456	-		Ga0059261_4055	0.22	-0.1
4,181,456	-		Ga0059261_4055	0.22	+0.0
4,181,458	+		Ga0059261_4055	0.22	-0.1
4,181,459	-		Ga0059261_4055	0.22	+0.4
4,181,527	+		Ga0059261_4055	0.27	-0.1
4,181,527	+		Ga0059261_4055	0.27	+1.1
4,181,527	+		Ga0059261_4055	0.27	-1.5
4,181,527	+		Ga0059261_4055	0.27	+0.2
4,181,528	-		Ga0059261_4055	0.27	-0.4
4,181,528	-		Ga0059261_4055	0.27	-0.1
4,181,686	+		Ga0059261_4055	0.37	+0.1
4,181,686	+		Ga0059261_4055	0.37	-0.5
4,181,686	+		Ga0059261_4055	0.37	+0.0
4,181,686	+		Ga0059261_4055	0.37	-0.4
4,181,686	+		Ga0059261_4055	0.37	-0.9
4,181,686	+		Ga0059261_4055	0.37	+0.4
4,181,687	-				+0.9
4,181,687	-		Ga0059261_4055	0.37	-0.5
4,181,687	-		Ga0059261_4055	0.37	-1.1
4,181,687	-		Ga0059261_4055	0.37	-0.1
4,181,687	-		Ga0059261_4055	0.37	-1.1
4,181,974	+		Ga0059261_4055	0.54	-2.5
4,181,975	-		Ga0059261_4055	0.55	+0.5
4,181,975	-		Ga0059261_4055	0.55	-1.2
4,181,975	-		Ga0059261_4055	0.55	+0.6
4,181,975	-		Ga0059261_4055	0.55	-0.1
4,182,008	-		Ga0059261_4055	0.57	-0.1
4,182,008	-				+0.3
4,182,105	+		Ga0059261_4055	0.63	-0.3
4,182,106	-		Ga0059261_4055	0.63	-0.0
4,182,106	-		Ga0059261_4055	0.63	-0.6
4,182,106	-		Ga0059261_4055	0.63	-0.5
4,182,106	-		Ga0059261_4055	0.63	-0.7
4,182,139	-		Ga0059261_4055	0.65	-0.7
4,182,259	+		Ga0059261_4055	0.72	-0.2
4,182,259	+		Ga0059261_4055	0.72	-1.5
4,182,259	+		Ga0059261_4055	0.72	-2.2
4,182,370	+		Ga0059261_4055	0.79	-0.6
4,182,371	-		Ga0059261_4055	0.79	+0.1
4,182,371	-		Ga0059261_4055	0.79	-0.7
4,182,391	+		Ga0059261_4055	0.81	+0.3
4,182,544	+				+0.4
4,182,544	+				-0.1
4,182,544	+				+0.5
4,182,545	-				+1.2
4,182,728	+				+0.4
4,182,767	+				+0.1
4,182,767	+				-0.3
4,182,821	-				+0.7
4,182,863	+				-0.8
4,182,863	+				-0.9
4,182,863	+				-0.1
4,182,863	+				-0.3
4,182,863	+				+0.0
4,182,864	-				-0.5
4,182,864	-				-0.2
4,182,864	-				+0.5
4,182,864	-				-1.1
4,182,911	-				-0.1
4,182,956	-				-0.2
4,182,956	-				-2.0
4,182,962	+				-1.5
4,182,962	+				+0.1
4,182,966	-				+1.3
4,183,040	+				-1.1
4,183,129	-				+0.4
4,183,156	-				-0.9
4,183,156	-				-1.2
4,183,156	-				+0.3
4,183,156	-				-0.6
4,183,156	-				+0.2
4,183,276	+				+1.7
4,183,276	+				+0.5
4,183,281	+				+0.2
4,183,281	+				+0.4
4,183,281	+				-0.3
4,183,281	+				-0.5
4,183,281	+				+0.4
4,183,281	+				+0.1
4,183,281	+				-0.6
4,183,282	-				-0.3
4,183,282	-				-0.1
4,183,375	+				-0.1
4,183,376	-				-1.1
4,183,431	+				+0.0
4,183,459	+				+1.4
4,183,459	+				+0.1
4,183,459	+				+0.3
4,183,460	-				+0.4