Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3865

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,970,170	+		Ga0059261_3864	0.28	-0.2
3,970,170	+		Ga0059261_3864	0.28	-0.2
3,970,170	+		Ga0059261_3864	0.28	-1.4
3,970,171	-		Ga0059261_3864	0.28	+0.4
3,970,171	-		Ga0059261_3864	0.28	-0.2
3,970,171	-		Ga0059261_3864	0.28	-1.6
3,970,171	-		Ga0059261_3864	0.28	-0.1
3,970,202	+		Ga0059261_3864	0.31	+0.9
3,970,203	-		Ga0059261_3864	0.31	-0.5
3,970,204	+		Ga0059261_3864	0.31	-0.5
3,970,204	+		Ga0059261_3864	0.31	-0.0
3,970,204	+		Ga0059261_3864	0.31	-0.8
3,970,204	+		Ga0059261_3864	0.31	-0.0
3,970,204	+		Ga0059261_3864	0.31	+0.2
3,970,204	+		Ga0059261_3864	0.31	-1.7
3,970,204	+		Ga0059261_3864	0.31	-0.5
3,970,205	-		Ga0059261_3864	0.31	-0.5
3,970,205	-		Ga0059261_3864	0.31	-0.3
3,970,205	-		Ga0059261_3864	0.31	+0.3
3,970,205	-		Ga0059261_3864	0.31	-1.4
3,970,205	-		Ga0059261_3864	0.31	+1.0
3,970,219	+		Ga0059261_3864	0.32	+0.3
3,970,220	-		Ga0059261_3864	0.32	-0.9
3,970,220	-		Ga0059261_3864	0.32	+0.6
3,970,220	-		Ga0059261_3864	0.32	+0.1
3,970,220	-		Ga0059261_3864	0.32	-0.1
3,970,375	+		Ga0059261_3864	0.46	+0.2
3,970,375	+		Ga0059261_3864	0.46	-0.2
3,970,376	-		Ga0059261_3864	0.46	+0.2
3,970,552	+		Ga0059261_3864	0.61	-0.6
3,970,552	+		Ga0059261_3864	0.61	+0.6
3,970,553	-		Ga0059261_3864	0.62	+0.5
3,970,553	-		Ga0059261_3864	0.62	+0.0
3,970,553	-		Ga0059261_3864	0.62	-0.2
3,970,553	-		Ga0059261_3864	0.62	+0.4
3,970,553	-		Ga0059261_3864	0.62	-1.1
3,970,586	-		Ga0059261_3864	0.64	+0.7
3,970,605	+		Ga0059261_3864	0.66	-0.1
3,970,605	+		Ga0059261_3864	0.66	-0.4
3,970,606	-		Ga0059261_3864	0.66	-0.6
3,970,709	+		Ga0059261_3864	0.75	+0.5
3,970,709	+		Ga0059261_3864	0.75	+0.2
3,970,710	-		Ga0059261_3864	0.75	-0.0
3,970,710	-		Ga0059261_3864	0.75	-0.4
3,970,710	-		Ga0059261_3864	0.75	+0.5
3,970,710	-		Ga0059261_3864	0.75	-0.6
3,970,912	+				-0.5
3,970,912	+				+0.3
3,970,913	-				-0.2
3,970,987	+				-0.2
3,970,988	-				+0.2
3,970,988	-				-2.7
3,971,237	+				-1.5
3,971,238	-				-0.4
3,971,238	-				+0.1
3,971,238	-				-0.5
3,971,285	+		Ga0059261_3865	0.11	+0.5
3,971,286	-		Ga0059261_3865	0.11	-0.2
3,971,286	-		Ga0059261_3865	0.11	-0.8
3,971,286	-		Ga0059261_3865	0.11	-0.7
3,971,286	-		Ga0059261_3865	0.11	-0.6
3,971,286	-		Ga0059261_3865	0.11	-0.3
3,971,286	-				+0.9
3,971,366	+		Ga0059261_3865	0.16	-0.1
3,971,366	+		Ga0059261_3865	0.16	-0.5
3,971,366	+		Ga0059261_3865	0.16	-1.6
3,971,435	+		Ga0059261_3865	0.21	+1.6
3,971,435	+		Ga0059261_3865	0.21	-0.4
3,971,435	+		Ga0059261_3865	0.21	-1.0
3,971,435	+		Ga0059261_3865	0.21	+1.7
3,971,435	+		Ga0059261_3865	0.21	-0.8
3,971,435	+		Ga0059261_3865	0.21	-1.7
3,971,435	+		Ga0059261_3865	0.21	-1.0
3,971,436	-		Ga0059261_3865	0.21	-0.7
3,971,436	-		Ga0059261_3865	0.21	+0.5
3,971,436	-		Ga0059261_3865	0.21	-0.8
3,971,436	-		Ga0059261_3865	0.21	-0.7
3,971,436	-		Ga0059261_3865	0.21	-0.7
3,971,436	-		Ga0059261_3865	0.21	-0.3
3,971,717	+		Ga0059261_3865	0.41	+0.1
3,971,717	+		Ga0059261_3865	0.41	+0.2
3,971,722	+		Ga0059261_3865	0.42	-0.7
3,971,722	+		Ga0059261_3865	0.42	-0.0
3,971,722	+		Ga0059261_3865	0.42	-0.1
3,971,723	-		Ga0059261_3865	0.42	-0.8
3,971,723	-		Ga0059261_3865	0.42	+0.6
3,971,922	-		Ga0059261_3865	0.56	-0.4
3,971,994	-		Ga0059261_3865	0.61	-0.5
3,972,197	+		Ga0059261_3865	0.75	-0.7
3,972,197	+		Ga0059261_3865	0.75	+0.9
3,972,197	+		Ga0059261_3865	0.75	-0.8
3,972,308	+		Ga0059261_3865	0.83	+1.2
3,972,309	-		Ga0059261_3865	0.83	-0.9
3,972,392	+		Ga0059261_3865	0.89	-0.9
3,972,422	+				+2.2
3,972,422	+				-0.7
3,972,422	+				+0.6
3,972,423	-				-0.7
3,972,423	-				-0.3
3,972,607	+				-0.2
3,972,607	+				+0.3
3,972,607	+				-1.0
3,972,607	+				-0.6
3,972,607	+				-0.3
3,972,608	-				-0.6
3,972,608	-				+0.4
3,972,608	-				-0.3
3,972,608	-				-0.0
3,972,608	-				+0.0
3,972,608	-				-0.8
3,972,608	-				-0.2
3,972,775	+		Ga0059261_3866	0.23	-0.6
3,972,775	+		Ga0059261_3866	0.23	-1.0
3,972,776	-		Ga0059261_3866	0.23	-0.2
3,972,776	-				+0.9
3,972,776	-		Ga0059261_3866	0.23	+1.5
3,972,988	+		Ga0059261_3866	0.44	-0.1
3,972,989	-		Ga0059261_3866	0.44	-0.2
3,972,989	-		Ga0059261_3866	0.44	+0.2
3,972,989	-		Ga0059261_3866	0.44	-0.7
3,973,050	-		Ga0059261_3866	0.50	-0.4
3,973,050	-		Ga0059261_3866	0.50	-0.1
3,973,106	+		Ga0059261_3866	0.56	-0.8
3,973,106	+		Ga0059261_3866	0.56	-0.3
3,973,107	-		Ga0059261_3866	0.56	-0.6
3,973,198	+		Ga0059261_3866	0.65	-0.2
3,973,198	+		Ga0059261_3866	0.65	-0.5
3,973,198	+		Ga0059261_3866	0.65	-0.7
3,973,199	-		Ga0059261_3866	0.65	-0.5
3,973,199	-		Ga0059261_3866	0.65	-0.4
3,973,199	-		Ga0059261_3866	0.65	-0.1
3,973,288	+		Ga0059261_3866	0.74	-0.4
3,973,288	+		Ga0059261_3866	0.74	-0.6
3,973,289	-		Ga0059261_3866	0.74	+0.3
3,973,381	+		Ga0059261_3866	0.83	-0.3
3,973,381	+		Ga0059261_3866	0.83	-0.1
3,973,381	+		Ga0059261_3866	0.83	-2.8
3,973,381	+				+0.2
3,973,381	+		Ga0059261_3866	0.83	-0.1
3,973,381	+		Ga0059261_3866	0.83	-0.1
3,973,381	+		Ga0059261_3866	0.83	+0.9
3,973,381	+		Ga0059261_3866	0.83	-0.2
3,973,381	+		Ga0059261_3866	0.83	+0.8
3,973,382	-		Ga0059261_3866	0.83	+1.3
3,973,382	-		Ga0059261_3866	0.83	-0.9
3,973,382	-		Ga0059261_3866	0.83	-0.5
3,973,382	-		Ga0059261_3866	0.83	-0.2
3,973,382	-		Ga0059261_3866	0.83	+1.2
3,973,382	-		Ga0059261_3866	0.83	-1.1
3,973,382	-		Ga0059261_3866	0.83	+0.9
3,973,382	-		Ga0059261_3866	0.83	-0.1
3,973,382	-		Ga0059261_3866	0.83	-0.4
3,973,382	-		Ga0059261_3866	0.83	+0.5
3,973,382	-		Ga0059261_3866	0.83	+0.2
3,973,382	-		Ga0059261_3866	0.83	+0.9
3,973,382	-		Ga0059261_3866	0.83	-0.5
3,973,382	-		Ga0059261_3866	0.83	-0.2
3,973,382	-		Ga0059261_3866	0.83	-1.0
3,973,388	-		Ga0059261_3866	0.84	-0.1
3,973,388	-		Ga0059261_3866	0.84	-1.0
3,973,388	-		Ga0059261_3866	0.84	-0.1
3,973,388	-		Ga0059261_3866	0.84	-0.5
3,973,388	-		Ga0059261_3866	0.84	+0.5
3,973,389	+		Ga0059261_3866	0.84	+0.2
3,973,389	+		Ga0059261_3866	0.84	+0.5
3,973,390	-		Ga0059261_3866	0.84	-0.3
3,973,469	+				-0.5
3,973,470	-				-2.4
3,973,470	-				-0.3
3,973,470	-				+0.3
3,973,492	+				-1.3
3,973,492	+				-0.3
3,973,492	+				-0.3
3,973,493	-				-0.0
3,973,493	-				+0.2
3,973,493	-				-0.1
3,973,507	+				-0.7
3,973,507	+				-1.1
3,973,543	+				+0.9