Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3859

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,963,620	+		Ga0059261_3858	0.62	-0.8
3,963,620	+		Ga0059261_3858	0.62	-0.1
3,963,620	+		Ga0059261_3858	0.62	-0.4
3,963,620	+		Ga0059261_3858	0.62	-0.2
3,963,621	-		Ga0059261_3858	0.62	+0.4
3,963,621	-		Ga0059261_3858	0.62	-0.6
3,963,621	-		Ga0059261_3858	0.62	+0.4
3,963,621	-		Ga0059261_3858	0.62	-1.3
3,963,621	-		Ga0059261_3858	0.62	+0.2
3,963,621	-		Ga0059261_3858	0.62	+0.2
3,963,699	+		Ga0059261_3858	0.65	-0.1
3,963,700	-		Ga0059261_3858	0.65	+0.8
3,963,729	+		Ga0059261_3858	0.66	-0.5
3,963,729	+		Ga0059261_3858	0.66	-0.4
3,963,745	+		Ga0059261_3858	0.67	+0.2
3,963,745	+		Ga0059261_3858	0.67	+0.6
3,963,746	-		Ga0059261_3858	0.67	-0.4
3,963,746	-		Ga0059261_3858	0.67	-0.6
3,963,746	-		Ga0059261_3858	0.67	+0.8
3,963,746	-		Ga0059261_3858	0.67	-0.5
3,963,746	-		Ga0059261_3858	0.67	-0.4
3,963,796	+		Ga0059261_3858	0.69	+0.2
3,963,796	+		Ga0059261_3858	0.69	-0.4
3,963,796	+		Ga0059261_3858	0.69	+0.2
3,963,796	+		Ga0059261_3858	0.69	+1.0
3,963,796	+		Ga0059261_3858	0.69	+0.9
3,963,797	-		Ga0059261_3858	0.69	+0.9
3,963,797	-		Ga0059261_3858	0.69	-0.6
3,964,110	+		Ga0059261_3858	0.81	+0.4
3,964,111	-		Ga0059261_3858	0.81	+0.2
3,964,291	+		Ga0059261_3858	0.88	-0.4
3,964,291	+		Ga0059261_3858	0.88	+0.3
3,964,292	-		Ga0059261_3858	0.89	-0.2
3,964,307	+		Ga0059261_3858	0.89	+0.5
3,964,307	+		Ga0059261_3858	0.89	-0.2
3,964,308	-		Ga0059261_3858	0.89	+0.1
3,964,328	-		Ga0059261_3858	0.90	-0.3
3,964,328	-		Ga0059261_3858	0.90	+0.1
3,964,545	-				+0.6
3,964,552	+				+0.2
3,964,552	+				+0.2
3,964,552	+				+0.5
3,964,552	+				+1.5
3,964,553	-				-0.5
3,964,553	-				+0.8
3,964,553	-				-0.6
3,964,553	-				-0.2
3,964,553	-				+0.1
3,964,556	+				+0.1
3,964,556	+				-0.1
3,964,556	+				+0.1
3,964,557	-				+0.3
3,964,557	-				+0.4
3,964,557	-				+0.0
3,964,557	-				-0.5
3,964,557	-				-1.1
3,964,837	+		Ga0059261_3859	0.55	-0.8
3,964,838	-		Ga0059261_3859	0.55	-0.1
3,964,838	-		Ga0059261_3859	0.55	-0.8
3,964,838	-		Ga0059261_3859	0.55	-1.1
3,964,908	-		Ga0059261_3859	0.69	-0.4
3,965,035	+				-0.3
3,965,035	+				-0.3
3,965,036	-				+0.1
3,965,036	-				-0.6
3,965,045	+				+0.2
3,965,045	+				+0.9
3,965,046	-				+0.4
3,965,046	-				+0.2
3,965,115	+				+0.9
3,965,116	-				-0.2
3,965,294	+		Ga0059261_3860	0.27	+0.3
3,965,294	+		Ga0059261_3860	0.27	+0.9
3,965,294	+		Ga0059261_3860	0.27	+0.9
3,965,294	+		Ga0059261_3860	0.27	+0.0
3,965,295	-		Ga0059261_3860	0.28	+1.2
3,965,295	-		Ga0059261_3860	0.28	+1.5
3,965,295	-		Ga0059261_3860	0.28	+0.5
3,965,295	-		Ga0059261_3860	0.28	-0.7
3,965,405	+		Ga0059261_3860	0.40	-0.4
3,965,405	+		Ga0059261_3860	0.40	+0.9
3,965,406	-		Ga0059261_3860	0.40	+0.3
3,965,406	-		Ga0059261_3860	0.40	-0.7
3,965,406	-		Ga0059261_3860	0.40	+1.3
3,965,436	-				-1.1
3,965,564	+		Ga0059261_3860	0.58	+0.2
3,965,564	+		Ga0059261_3860	0.58	+0.6
3,965,565	-		Ga0059261_3860	0.58	-0.5
3,965,565	-		Ga0059261_3860	0.58	+1.2
3,965,565	-		Ga0059261_3860	0.58	-0.5
3,965,565	-		Ga0059261_3860	0.58	-0.6
3,965,565	-		Ga0059261_3860	0.58	-1.6
3,965,603	+		Ga0059261_3860	0.62	+0.5
3,965,603	+		Ga0059261_3860	0.62	-0.8
3,965,603	+		Ga0059261_3860	0.62	+0.0
3,965,618	+		Ga0059261_3860	0.64	+0.5
3,965,618	+		Ga0059261_3860	0.64	-0.8
3,965,618	+		Ga0059261_3860	0.64	+0.3
3,965,618	+		Ga0059261_3860	0.64	+0.0
3,965,618	+		Ga0059261_3860	0.64	-0.0
3,965,618	+				+0.9
3,965,618	+		Ga0059261_3860	0.64	+0.5
3,965,619	-		Ga0059261_3860	0.64	+0.6
3,965,619	-		Ga0059261_3860	0.64	-0.4
3,965,720	+		Ga0059261_3860	0.75	+0.4
3,965,720	+		Ga0059261_3860	0.75	+0.5
3,965,720	+				+0.2
3,965,720	+		Ga0059261_3860	0.75	-0.2
3,965,721	-		Ga0059261_3860	0.76	+0.1
3,965,721	-		Ga0059261_3860	0.76	+0.1
3,965,721	-		Ga0059261_3860	0.76	+0.0
3,965,721	-		Ga0059261_3860	0.76	-1.7
3,965,721	-		Ga0059261_3860	0.76	+0.3
3,965,721	-		Ga0059261_3860	0.76	-0.5
3,965,721	-		Ga0059261_3860	0.76	-0.3
3,965,721	-		Ga0059261_3860	0.76	+0.0
3,965,741	+		Ga0059261_3860	0.78	+0.2
3,965,742	-		Ga0059261_3860	0.78	-0.0
3,965,749	+		Ga0059261_3860	0.79	-0.7
3,965,749	+		Ga0059261_3860	0.79	-0.7
3,965,750	-		Ga0059261_3860	0.79	+1.5
3,965,870	+				-0.7
3,965,871	-				+0.4
3,965,921	+				+0.8
3,965,921	+				-1.2
3,965,922	-				+0.2
3,965,922	-				-0.8
3,965,922	-				-0.1