Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3646

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,761,452	+		Ga0059261_3645	0.35	-0.6
3,761,452	+		Ga0059261_3645	0.35	+0.6
3,761,452	+		Ga0059261_3645	0.35	+0.1
3,761,453	-		Ga0059261_3645	0.35	+0.3
3,761,453	-		Ga0059261_3645	0.35	+0.4
3,761,577	+		Ga0059261_3645	0.44	+0.5
3,761,577	+		Ga0059261_3645	0.44	+0.3
3,761,577	+		Ga0059261_3645	0.44	-0.2
3,761,577	+		Ga0059261_3645	0.44	-0.4
3,761,577	+		Ga0059261_3645	0.44	-0.6
3,761,577	+		Ga0059261_3645	0.44	-0.3
3,761,577	+		Ga0059261_3645	0.44	-0.4
3,761,578	-		Ga0059261_3645	0.44	-0.1
3,761,578	-		Ga0059261_3645	0.44	+1.5
3,761,578	-		Ga0059261_3645	0.44	-0.2
3,761,578	-		Ga0059261_3645	0.44	-0.2
3,761,578	-		Ga0059261_3645	0.44	-0.4
3,761,578	-		Ga0059261_3645	0.44	-0.8
3,761,578	-		Ga0059261_3645	0.44	-0.2
3,761,578	-		Ga0059261_3645	0.44	+0.2
3,761,578	-		Ga0059261_3645	0.44	-0.2
3,761,578	-		Ga0059261_3645	0.44	-0.2
3,761,578	-		Ga0059261_3645	0.44	+0.8
3,761,578	-		Ga0059261_3645	0.44	+1.0
3,761,578	-		Ga0059261_3645	0.44	-0.7
3,761,667	+				+1.5
3,761,667	+		Ga0059261_3645	0.51	+0.7
3,761,667	+		Ga0059261_3645	0.51	-0.4
3,761,667	+		Ga0059261_3645	0.51	+0.8
3,761,667	+		Ga0059261_3645	0.51	-0.3
3,761,667	+		Ga0059261_3645	0.51	+0.3
3,761,667	+		Ga0059261_3645	0.51	-0.5
3,761,667	+		Ga0059261_3645	0.51	-1.4
3,761,667	+		Ga0059261_3645	0.51	-0.0
3,761,667	+		Ga0059261_3645	0.51	-0.8
3,761,667	+		Ga0059261_3645	0.51	-0.7
3,761,668	-		Ga0059261_3645	0.51	+0.3
3,761,668	-		Ga0059261_3645	0.51	-0.1
3,761,668	-		Ga0059261_3645	0.51	-0.4
3,761,668	-		Ga0059261_3645	0.51	-0.7
3,761,668	-		Ga0059261_3645	0.51	-0.1
3,761,668	-		Ga0059261_3645	0.51	+0.3
3,761,790	+		Ga0059261_3645	0.60	+0.8
3,761,790	+		Ga0059261_3645	0.60	-0.8
3,761,814	+		Ga0059261_3645	0.62	+0.2
3,761,815	-		Ga0059261_3645	0.62	-0.4
3,761,815	-		Ga0059261_3645	0.62	+0.6
3,761,820	+		Ga0059261_3645	0.62	+0.5
3,761,820	+		Ga0059261_3645	0.62	+0.0
3,761,820	+		Ga0059261_3645	0.62	-0.1
3,761,820	+		Ga0059261_3645	0.62	-1.1
3,761,821	-		Ga0059261_3645	0.62	-0.0
3,761,821	-		Ga0059261_3645	0.62	-0.7
3,762,044	+		Ga0059261_3645	0.79	+0.5
3,762,044	+		Ga0059261_3645	0.79	-0.1
3,762,044	+		Ga0059261_3645	0.79	-1.4
3,762,045	-		Ga0059261_3645	0.79	+0.1
3,762,045	-		Ga0059261_3645	0.79	-0.1
3,762,045	-		Ga0059261_3645	0.79	-0.7
3,762,210	+				+0.6
3,762,210	+				+0.1
3,762,210	+				-0.1
3,762,210	+				+0.1
3,762,210	+				-0.6
3,762,211	-				-0.4
3,762,211	-				-0.9
3,762,211	-				+1.0
3,762,211	-				-0.3
3,762,211	-				+0.8
3,762,211	-				-0.3
3,762,211	-				-0.3
3,762,211	-				+0.4
3,762,211	-				-0.9
3,762,279	+				-1.5
3,762,279	+				+0.5
3,762,280	-				-0.7
3,762,288	+				+0.6
3,762,289	-				-0.1
3,762,289	-				-0.1
3,762,289	-				-0.3
3,762,380	+				-0.1
3,762,380	+				+0.1
3,762,380	+				-0.1
3,762,380	+				+0.4
3,762,380	+				+0.6
3,762,381	-				+0.4
3,762,473	+				+0.1
3,762,474	-				+1.3
3,762,474	-				-0.4
3,762,559	-		Ga0059261_3646	0.24	-1.7
3,762,771	+		Ga0059261_3646	0.67	-0.2
3,762,771	+		Ga0059261_3646	0.67	-2.9
3,762,771	+		Ga0059261_3646	0.67	-0.2
3,762,772	-		Ga0059261_3646	0.68	-1.5
3,762,904	-				-0.2
3,762,904	-				-0.1
3,762,949	+				-0.7
3,762,949	+				-0.3
3,762,949	+				-0.9
3,762,949	+				+1.0
3,762,949	+				+0.8
3,762,950	-				+0.1
3,762,950	-				+0.9
3,762,950	-				+0.3
3,762,950	-				-0.2
3,763,047	+				+0.2
3,763,047	+				-0.2
3,763,047	+				+1.0
3,763,048	-				-0.4
3,763,048	-				-0.2
3,763,048	-				+0.1
3,763,048	-				+1.3
3,763,048	-				-0.1
3,763,048	-				+0.7
3,763,048	-				-0.1
3,763,048	-				+0.2
3,763,048	-				+0.2
3,763,048	-				+0.0
3,763,048	-				+0.9
3,763,229	-		Ga0059261_3647	0.25	-0.5
3,763,231	+		Ga0059261_3647	0.25	+0.3
3,763,231	+		Ga0059261_3647	0.25	+0.0
3,763,231	+		Ga0059261_3647	0.25	-1.1
3,763,231	+		Ga0059261_3647	0.25	+0.5
3,763,231	+		Ga0059261_3647	0.25	+0.0
3,763,231	+		Ga0059261_3647	0.25	+0.0
3,763,231	+		Ga0059261_3647	0.25	-1.1
3,763,231	+		Ga0059261_3647	0.25	+0.3
3,763,232	-		Ga0059261_3647	0.25	-0.4
3,763,232	-		Ga0059261_3647	0.25	-0.2
3,763,232	-		Ga0059261_3647	0.25	+0.5
3,763,299	+		Ga0059261_3647	0.33	+0.3
3,763,299	+		Ga0059261_3647	0.33	-0.5
3,763,299	+		Ga0059261_3647	0.33	+0.7
3,763,300	-		Ga0059261_3647	0.33	-0.1
3,763,449	+		Ga0059261_3647	0.49	+0.4
3,763,449	+		Ga0059261_3647	0.49	+0.3
3,763,450	-		Ga0059261_3647	0.50	+0.4
3,763,450	-		Ga0059261_3647	0.50	+0.3
3,763,450	-		Ga0059261_3647	0.50	-0.5
3,763,701	+		Ga0059261_3647	0.78	-0.0
3,763,701	+		Ga0059261_3647	0.78	+1.3
3,763,702	-		Ga0059261_3647	0.78	+0.1
3,763,702	-		Ga0059261_3647	0.78	-1.8
3,763,719	+		Ga0059261_3647	0.80	+0.4
3,763,763	+		Ga0059261_3647	0.85	+0.3
3,763,803	-		Ga0059261_3647	0.89	-0.3
3,763,803	-		Ga0059261_3647	0.89	+1.4