Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3637

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,753,063	-		Ga0059261_3635	0.33	-0.9
3,753,063	-		Ga0059261_3635	0.33	+0.6
3,753,063	-		Ga0059261_3635	0.33	-0.2
3,753,140	+		Ga0059261_3635	0.60	+0.7
3,753,140	+		Ga0059261_3635	0.60	+0.7
3,753,140	+		Ga0059261_3635	0.60	-0.4
3,753,140	+		Ga0059261_3635	0.60	-0.2
3,753,141	-		Ga0059261_3635	0.60	+0.3
3,753,418	+				+1.1
3,753,418	+				-0.5
3,753,418	+				+0.3
3,753,418	+				+0.7
3,753,419	-				+0.4
3,753,419	-				-1.0
3,753,419	-				-0.3
3,753,419	-				-1.1
3,753,419	-				+0.1
3,753,419	-				+0.3
3,753,419	-				-0.4
3,753,419	-				-0.5
3,753,419	-				+0.4
3,753,419	-				-0.2
3,753,573	+		Ga0059261_3636	0.21	-0.6
3,753,574	-		Ga0059261_3636	0.21	-0.1
3,753,574	-		Ga0059261_3636	0.21	+0.4
3,753,660	+		Ga0059261_3636	0.37	+0.5
3,753,660	+		Ga0059261_3636	0.37	-0.1
3,753,660	+		Ga0059261_3636	0.37	-0.1
3,753,660	+		Ga0059261_3636	0.37	+0.1
3,753,660	+		Ga0059261_3636	0.37	+0.2
3,753,660	+		Ga0059261_3636	0.37	-0.1
3,753,660	+		Ga0059261_3636	0.37	+0.1
3,753,661	-		Ga0059261_3636	0.37	-0.1
3,753,661	-		Ga0059261_3636	0.37	+1.2
3,753,661	-		Ga0059261_3636	0.37	+0.1
3,753,661	-		Ga0059261_3636	0.37	+0.2
3,753,708	+		Ga0059261_3636	0.46	+0.1
3,753,708	+		Ga0059261_3636	0.46	-0.0
3,753,709	-		Ga0059261_3636	0.46	-0.2
3,753,709	-		Ga0059261_3636	0.46	-1.8
3,753,820	+		Ga0059261_3636	0.67	-0.5
3,753,982	+				+0.3
3,754,194	-		Ga0059261_3637	0.31	-1.1
3,754,194	-		Ga0059261_3637	0.31	-0.3
3,754,194	-		Ga0059261_3637	0.31	-1.1
3,754,373	-		Ga0059261_3637	0.58	-0.1
3,754,523	+		Ga0059261_3637	0.82	-2.2
3,754,571	+		Ga0059261_3637	0.89	+0.5
3,754,655	+				+0.6
3,754,656	-				-1.2
3,754,656	-				+0.3
3,754,702	+				-1.1
3,754,702	+				+1.7
3,754,703	-				-0.3
3,754,703	-				+0.7
3,754,730	+				-0.1
3,754,730	+				-0.3
3,754,730	+				+0.4
3,754,731	-				-0.3
3,754,731	-				+0.1
3,754,845	+		Ga0059261_3638	0.44	+0.1
3,754,846	-		Ga0059261_3638	0.45	+0.0
3,754,979	+				-0.6
3,754,979	+				+0.8
3,755,096	+				+0.6
3,755,097	-				-0.7
3,755,273	+		Ga0059261_3639	0.27	-0.2
3,755,274	-		Ga0059261_3639	0.27	-0.4
3,755,387	+		Ga0059261_3639	0.41	+0.7
3,755,388	-		Ga0059261_3639	0.41	-0.4
3,755,389	+		Ga0059261_3639	0.41	-0.1
3,755,389	+				+0.9
3,755,389	+		Ga0059261_3639	0.41	+0.2
3,755,389	+		Ga0059261_3639	0.41	+0.6
3,755,390	-		Ga0059261_3639	0.41	-0.7
3,755,390	-		Ga0059261_3639	0.41	+1.0
3,755,390	-		Ga0059261_3639	0.41	-0.7
3,755,390	-		Ga0059261_3639	0.41	-0.1
3,755,422	+		Ga0059261_3639	0.45	-0.2
3,755,422	+		Ga0059261_3639	0.45	-0.4
3,755,423	-		Ga0059261_3639	0.45	+0.4
3,755,423	-		Ga0059261_3639	0.45	+0.0
3,755,480	+		Ga0059261_3639	0.52	+0.0
3,755,480	+		Ga0059261_3639	0.52	-0.1
3,755,481	-		Ga0059261_3639	0.52	+0.9
3,755,618	+		Ga0059261_3639	0.69	-0.1
3,755,618	+		Ga0059261_3639	0.69	-0.2
3,755,619	-		Ga0059261_3639	0.69	-0.2
3,755,619	-		Ga0059261_3639	0.69	-0.7
3,755,619	-		Ga0059261_3639	0.69	-1.2