Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3620
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,738,819 | - | Ga0059261_3620 | 0.29 | -0.0 | |
3,738,819 | - | Ga0059261_3620 | 0.29 | -1.4 | |
3,738,819 | - | Ga0059261_3620 | 0.29 | -0.6 | |
3,739,200 | - | Ga0059261_3620 | 0.67 | -0.4 | |
3,739,200 | - | +0.9 | |||
3,739,434 | - | -0.6 | |||
3,739,434 | - | +0.2 | |||
3,739,469 | - | -0.7 | |||
3,739,533 | - | -0.5 | |||
3,739,533 | - | -0.7 | |||
3,739,541 | - | +0.2 | |||
3,739,541 | - | -0.6 | |||
3,739,541 | - | +0.9 | |||
3,739,541 | - | +0.9 | |||
3,739,574 | + | -0.5 | |||
3,739,825 | + | Ga0059261_3621 | 0.12 | +0.5 | |
3,739,826 | - | Ga0059261_3621 | 0.12 | +0.3 | |
3,739,906 | - | Ga0059261_3621 | 0.16 | -0.1 | |
3,739,906 | - | Ga0059261_3621 | 0.16 | -0.4 | |
3,740,338 | + | Ga0059261_3621 | 0.38 | -1.0 | |
3,740,339 | - | Ga0059261_3621 | 0.38 | +0.3 | |
3,740,469 | + | Ga0059261_3621 | 0.45 | +0.1 | |
3,740,470 | - | Ga0059261_3621 | 0.45 | +0.3 | |
3,740,470 | - | Ga0059261_3621 | 0.45 | +0.1 | |
3,740,470 | - | Ga0059261_3621 | 0.45 | +0.4 | |
3,740,470 | - | Ga0059261_3621 | 0.45 | -0.2 |
Or see this region's nucleotide sequence