Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3612

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,731,236	+				+0.9
3,731,236	+				-1.0
3,731,236	+				-0.0
3,731,237	-				+0.0
3,731,237	-				+0.7
3,731,254	+				+0.1
3,731,255	-				-0.5
3,731,299	+				-0.5
3,732,009	+				-0.1
3,732,009	+				-0.3
3,732,009	+				-0.3
3,732,009	+				-0.6
3,732,010	-				-0.3
3,732,010	-				+1.3
3,732,068	+				+0.1
3,732,068	+				-0.3
3,732,068	+				-0.1
3,732,069	-				-0.6
3,732,296	+		Ga0059261_3612	0.38	-0.5
3,732,296	+		Ga0059261_3612	0.38	-0.9
3,732,297	-		Ga0059261_3612	0.38	-0.7
3,732,297	-		Ga0059261_3612	0.38	+1.3
3,732,297	-		Ga0059261_3612	0.38	-1.6
3,732,316	+		Ga0059261_3612	0.40	-0.3
3,732,316	+		Ga0059261_3612	0.40	-0.8
3,732,316	+		Ga0059261_3612	0.40	+0.6
3,732,316	+		Ga0059261_3612	0.40	+1.3
3,732,316	+		Ga0059261_3612	0.40	-0.7
3,732,316	+		Ga0059261_3612	0.40	-1.4
3,732,316	+		Ga0059261_3612	0.40	+0.5
3,732,316	+		Ga0059261_3612	0.40	-2.0
3,732,316	+		Ga0059261_3612	0.40	+0.8
3,732,317	-		Ga0059261_3612	0.40	-0.3
3,732,317	-		Ga0059261_3612	0.40	-0.7
3,732,317	-		Ga0059261_3612	0.40	-0.7
3,732,317	-		Ga0059261_3612	0.40	-0.9
3,732,317	-		Ga0059261_3612	0.40	-2.1
3,732,317	-		Ga0059261_3612	0.40	+0.0
3,732,317	-		Ga0059261_3612	0.40	-0.3
3,732,446	+		Ga0059261_3612	0.58	-0.7
3,732,446	+		Ga0059261_3612	0.58	-0.2
3,732,446	+		Ga0059261_3612	0.58	-0.4
3,732,446	+		Ga0059261_3612	0.58	-1.4
3,732,446	+		Ga0059261_3612	0.58	-0.9
3,732,446	+		Ga0059261_3612	0.58	-2.8
3,732,446	+		Ga0059261_3612	0.58	-0.3
3,732,447	-				-1.4
3,732,447	-		Ga0059261_3612	0.58	-0.8
3,732,447	-		Ga0059261_3612	0.58	-0.2
3,732,447	-		Ga0059261_3612	0.58	-1.3
3,732,447	-		Ga0059261_3612	0.58	-0.9
3,732,447	-		Ga0059261_3612	0.58	-0.7
3,732,447	-		Ga0059261_3612	0.58	-0.8
3,732,512	-		Ga0059261_3612	0.66	-0.1
3,732,512	-		Ga0059261_3612	0.66	-0.3
3,732,765	+				+0.2
3,732,765	+				-0.6
3,732,765	+				+0.7
3,732,766	-				-0.8
3,732,766	-				-0.3
3,732,766	-				-0.3
3,732,767	+				-0.0
3,732,767	+				-0.6
3,732,767	+				-0.5
3,732,767	+				-1.4
3,732,767	+				+0.5
3,732,767	+				-0.7
3,732,767	+				-0.7
3,732,767	+				-0.4
3,732,767	+				+1.9
3,732,767	+				-0.3
3,732,767	+				+0.1
3,732,767	+				+0.1
3,732,767	+				+0.9
3,732,767	+				+1.3
3,732,768	-				-0.4
3,732,768	-				-0.5
3,732,768	-				+1.3
3,732,768	-				-0.8
3,732,768	-				+0.6
3,732,768	-				-1.5
3,732,768	-				+0.8
3,732,768	-				-0.1
3,732,768	-				+0.9
3,732,768	-				+0.3
3,732,768	-				-1.1
3,732,768	-				+0.2
3,732,768	-				-1.1
3,732,768	-				-0.1
3,732,768	-				+0.1
3,732,873	+		Ga0059261_3613	0.33	+0.1
3,732,873	+		Ga0059261_3613	0.33	+0.7
3,732,873	+				+1.9
3,732,915	+		Ga0059261_3613	0.45	-0.1
3,732,916	-		Ga0059261_3613	0.45	+0.7
3,732,916	-		Ga0059261_3613	0.45	-2.4
3,732,917	-		Ga0059261_3613	0.45	+0.0
3,732,921	+		Ga0059261_3613	0.46	+0.4
3,732,921	+		Ga0059261_3613	0.46	-0.7
3,732,921	+		Ga0059261_3613	0.46	-0.3
3,732,921	+		Ga0059261_3613	0.46	-0.7
3,732,921	+		Ga0059261_3613	0.46	+0.3
3,732,922	-		Ga0059261_3613	0.46	+0.5
3,732,922	-		Ga0059261_3613	0.46	+0.2
3,732,922	-		Ga0059261_3613	0.46	-0.9
3,732,963	-		Ga0059261_3613	0.58	-0.3
3,732,983	-		Ga0059261_3613	0.64	-0.3
3,733,066	-		Ga0059261_3613	0.87	+0.3
3,733,066	-		Ga0059261_3613	0.87	-0.1
3,733,081	+				-0.1
3,733,081	+				-0.3
3,733,081	+				-1.8
3,733,141	+				-1.5
3,733,141	+				-0.1
3,733,141	+				-0.2
3,733,141	+				-0.3
3,733,141	+				+0.0
3,733,142	-				+0.4
3,733,185	+		Ga0059261_3614	0.13	+2.8
3,733,185	+		Ga0059261_3614	0.13	-0.3
3,733,185	+		Ga0059261_3614	0.13	+0.5
3,733,186	-		Ga0059261_3614	0.14	+0.5
3,733,186	-		Ga0059261_3614	0.14	-0.0
3,733,186	-		Ga0059261_3614	0.14	-0.3
3,733,301	+		Ga0059261_3614	0.42	+0.0
3,733,301	+		Ga0059261_3614	0.42	+0.4
3,733,301	+		Ga0059261_3614	0.42	-0.3
3,733,301	+		Ga0059261_3614	0.42	-0.7
3,733,301	+		Ga0059261_3614	0.42	-1.1
3,733,301	+		Ga0059261_3614	0.42	-0.2
3,733,301	+		Ga0059261_3614	0.42	-0.4
3,733,301	+		Ga0059261_3614	0.42	-0.3
3,733,301	+		Ga0059261_3614	0.42	-0.6
3,733,302	-		Ga0059261_3614	0.42	-0.1
3,733,302	-		Ga0059261_3614	0.42	-0.5
3,733,302	-		Ga0059261_3614	0.42	+0.4
3,733,302	-		Ga0059261_3614	0.42	-0.8
3,733,302	-		Ga0059261_3614	0.42	-0.1
3,733,302	-		Ga0059261_3614	0.42	-0.2
3,733,302	-		Ga0059261_3614	0.42	+1.3
3,733,302	-		Ga0059261_3614	0.42	+0.0
3,733,302	-		Ga0059261_3614	0.42	-0.3
3,733,305	-		Ga0059261_3614	0.43	-0.7
3,733,460	+		Ga0059261_3614	0.81	-0.1
3,733,460	+		Ga0059261_3614	0.81	-0.2
3,733,460	+		Ga0059261_3614	0.81	+0.9
3,733,461	-		Ga0059261_3614	0.81	+0.2
3,733,577	+				-0.1
3,733,577	+				-0.1
3,733,577	+				+0.5
3,733,577	+				+0.9
3,733,577	+				+0.3
3,733,577	+				+0.8
3,733,624	+				+0.1
3,733,624	+				+0.2
3,733,631	+				-1.2
3,733,631	+				-0.2
3,733,678	+		Ga0059261_3615	0.15	-2.0