Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3334

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,463,546	-		Ga0059261_3332	0.49	+0.1
3,463,818	+		Ga0059261_3332	0.81	-0.1
3,463,818	+		Ga0059261_3332	0.81	+0.4
3,463,818	+		Ga0059261_3332	0.81	+0.2
3,463,818	+		Ga0059261_3332	0.81	-0.4
3,463,818	+		Ga0059261_3332	0.81	-0.3
3,463,818	+		Ga0059261_3332	0.81	+0.4
3,463,818	+		Ga0059261_3332	0.81	+0.5
3,463,819	-		Ga0059261_3332	0.81	-0.2
3,463,819	-		Ga0059261_3332	0.81	+0.3
3,463,819	-		Ga0059261_3332	0.81	+0.1
3,463,875	+		Ga0059261_3332	0.87	+0.6
3,463,875	+		Ga0059261_3332	0.87	-0.3
3,463,876	-		Ga0059261_3332	0.87	-0.5
3,463,911	+				+0.0
3,463,912	-				-0.3
3,463,917	+				-0.1
3,463,918	-				-0.2
3,463,918	-				+0.1
3,463,918	-				-0.0
3,463,918	-				+0.3
3,463,918	-				-0.4
3,464,040	+				-0.1
3,464,041	-				+0.0
3,464,041	-				-0.5
3,464,041	-				+0.3
3,464,254	+		Ga0059261_3333	0.45	+0.5
3,464,332	+		Ga0059261_3333	0.62	+0.3
3,464,332	+		Ga0059261_3333	0.62	+0.2
3,464,364	-		Ga0059261_3333	0.69	+0.3
3,464,432	+		Ga0059261_3333	0.83	-0.6
3,464,432	+		Ga0059261_3333	0.83	-0.1
3,464,432	+		Ga0059261_3333	0.83	+0.8
3,464,433	-		Ga0059261_3333	0.83	+0.3
3,464,433	-		Ga0059261_3333	0.83	+0.3
3,464,433	-		Ga0059261_3333	0.83	-0.6
3,464,433	-		Ga0059261_3333	0.83	+0.7
3,464,433	-		Ga0059261_3333	0.83	-0.8
3,464,433	-		Ga0059261_3333	0.83	-0.1
3,464,433	-		Ga0059261_3333	0.83	-0.3
3,464,433	-		Ga0059261_3333	0.83	+1.2
3,464,434	+		Ga0059261_3333	0.83	+1.4
3,464,434	+		Ga0059261_3333	0.83	+1.2
3,464,434	+		Ga0059261_3333	0.83	+0.3
3,464,434	+		Ga0059261_3333	0.83	+0.2
3,464,434	+		Ga0059261_3333	0.83	-0.2
3,464,434	+		Ga0059261_3333	0.83	-0.2
3,464,434	+		Ga0059261_3333	0.83	+0.6
3,464,434	+		Ga0059261_3333	0.83	+0.2
3,464,434	+		Ga0059261_3333	0.83	-0.8
3,464,435	-		Ga0059261_3333	0.83	+0.5
3,464,435	-		Ga0059261_3333	0.83	-0.5
3,464,435	-		Ga0059261_3333	0.83	+0.1
3,464,435	-		Ga0059261_3333	0.83	+0.3
3,464,435	-		Ga0059261_3333	0.83	-0.8
3,464,435	-		Ga0059261_3333	0.83	+0.2
3,464,435	-		Ga0059261_3333	0.83	-0.3
3,464,435	-		Ga0059261_3333	0.83	-1.0
3,464,435	-		Ga0059261_3333	0.83	+1.0
3,464,437	+		Ga0059261_3333	0.84	-1.5
3,464,437	+		Ga0059261_3333	0.84	+1.4
3,464,456	+		Ga0059261_3333	0.88	+0.3
3,464,457	-		Ga0059261_3333	0.88	-0.6
3,464,457	-		Ga0059261_3333	0.88	+0.2
3,464,637	+				+1.0
3,464,638	-				+0.4
3,464,638	-				-0.0
3,464,638	-				-2.2
3,464,706	+		Ga0059261_3334	0.13	-0.3
3,464,707	-		Ga0059261_3334	0.13	-0.5
3,464,733	+		Ga0059261_3334	0.15	+0.0
3,464,734	-		Ga0059261_3334	0.15	+0.1
3,464,910	+		Ga0059261_3334	0.26	+0.4
3,464,910	+		Ga0059261_3334	0.26	-1.0
3,464,911	-		Ga0059261_3334	0.26	-0.2
3,464,911	-		Ga0059261_3334	0.26	-0.5
3,464,911	-		Ga0059261_3334	0.26	-0.6
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,913	+		Ga0059261_3334	0.26	-1.4
3,464,913	+		Ga0059261_3334	0.26	-0.6
3,464,913	+		Ga0059261_3334	0.26	-0.4
3,464,913	+		Ga0059261_3334	0.26	+0.4
3,464,913	+		Ga0059261_3334	0.26	+1.0
3,464,913	+		Ga0059261_3334	0.26	-0.2
3,464,913	+		Ga0059261_3334	0.26	-0.0
3,464,913	+		Ga0059261_3334	0.26	+1.2
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,913	+		Ga0059261_3334	0.26	+0.0
3,464,913	+		Ga0059261_3334	0.26	+0.0
3,464,913	+		Ga0059261_3334	0.26	+0.3
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,913	+		Ga0059261_3334	0.26	+1.5
3,464,913	+		Ga0059261_3334	0.26	-0.6
3,464,913	+		Ga0059261_3334	0.26	+0.1
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,913	+		Ga0059261_3334	0.26	+0.2
3,464,913	+		Ga0059261_3334	0.26	+0.2
3,464,913	+		Ga0059261_3334	0.26	-0.7
3,464,914	-		Ga0059261_3334	0.27	+0.1
3,464,914	-		Ga0059261_3334	0.27	+0.0
3,464,914	-				-0.6
3,464,914	-		Ga0059261_3334	0.27	-1.7
3,464,914	-				-0.0
3,464,914	-		Ga0059261_3334	0.27	-0.4
3,464,914	-		Ga0059261_3334	0.27	+0.4
3,464,914	-		Ga0059261_3334	0.27	+0.0
3,464,914	-		Ga0059261_3334	0.27	-0.3
3,464,914	-		Ga0059261_3334	0.27	-0.2
3,464,914	-		Ga0059261_3334	0.27	-0.2
3,464,914	-		Ga0059261_3334	0.27	+0.3
3,465,150	+		Ga0059261_3334	0.42	-0.2
3,465,150	+		Ga0059261_3334	0.42	-1.2
3,465,150	+		Ga0059261_3334	0.42	-0.5
3,465,150	+		Ga0059261_3334	0.42	-1.4
3,465,151	-		Ga0059261_3334	0.42	+0.1
3,465,598	+				+1.0
3,465,598	+		Ga0059261_3334	0.71	-0.6
3,465,598	+		Ga0059261_3334	0.71	-0.5
3,465,598	+		Ga0059261_3334	0.71	-0.4
3,465,599	-		Ga0059261_3334	0.71	+0.1
3,465,724	-		Ga0059261_3334	0.80	+0.3
3,465,724	-		Ga0059261_3334	0.80	-0.2
3,465,724	-		Ga0059261_3334	0.80	+0.6
3,465,772	+		Ga0059261_3334	0.83	+0.0
3,465,773	-		Ga0059261_3334	0.83	+0.2
3,465,773	-		Ga0059261_3334	0.83	+0.4
3,465,924	+				-1.0
3,465,924	+				-0.4
3,465,924	+				-0.5
3,465,925	-				+0.5
3,465,925	-				-0.2
3,465,925	-				+0.6
3,465,925	-				-0.6
3,465,948	+				-0.5
3,465,948	+				-0.3
3,465,948	+				-0.9
3,465,948	+				+0.3
3,465,948	+				-1.0
3,465,949	-				-0.0
3,465,949	-				-0.9
3,465,949	-				-0.0
3,465,949	-				-0.5
3,465,949	-				-0.3
3,465,949	-				+0.6
3,465,949	-				-0.6
3,465,963	+				-0.3
3,465,963	+				-0.0
3,465,964	-				+0.4
3,465,964	-				+0.5
3,465,966	+				+0.8
3,465,966	+				-0.3
3,465,966	+				-0.4
3,465,966	+				-1.2
3,465,966	+				-0.6
3,465,966	+				-0.6
3,465,966	+				+0.2
3,465,966	+				+0.4
3,465,966	+				-0.8
3,465,966	+				-2.0
3,465,967	-				+0.3
3,465,967	-				-1.0
3,465,967	-				+1.0
3,465,967	-				-0.6
3,465,967	-				-0.0
3,465,967	-				+1.0
3,465,967	-				-0.6
3,465,967	-				-1.2
3,465,967	-				+1.0
3,465,967	-				+0.2
3,466,459	+		Ga0059261_3335	0.89	+0.2
3,466,459	+		Ga0059261_3335	0.89	-0.6
3,466,460	-		Ga0059261_3335	0.89	-0.3
3,466,575	+				-0.5
3,466,575	+				-0.7
3,466,575	+				-0.1
3,466,575	+				-0.2
3,466,575	+				+0.2
3,466,576	-				+0.3
3,466,822	+		Ga0059261_3336	0.13	+0.1
3,466,822	+		Ga0059261_3336	0.13	-0.0
3,466,823	-		Ga0059261_3336	0.13	-0.1
3,466,839	+		Ga0059261_3336	0.13	-0.6
3,466,839	+		Ga0059261_3336	0.13	+0.1
3,466,840	-		Ga0059261_3336	0.13	-0.5
3,466,840	-		Ga0059261_3336	0.13	-0.3
3,467,001	+		Ga0059261_3336	0.21	+1.3
3,467,001	+		Ga0059261_3336	0.21	-0.0
3,467,001	+		Ga0059261_3336	0.21	+0.2
3,467,002	-		Ga0059261_3336	0.21	+0.2
3,467,002	-		Ga0059261_3336	0.21	-0.1
3,467,002	-		Ga0059261_3336	0.21	+0.5
3,467,002	-		Ga0059261_3336	0.21	-1.9
3,467,002	-		Ga0059261_3336	0.21	-1.4
3,467,002	-		Ga0059261_3336	0.21	+0.0