Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3276

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,407,199	+		Ga0059261_3275	0.51	-0.3
3,407,199	+		Ga0059261_3275	0.51	+0.1
3,407,199	+		Ga0059261_3275	0.51	-0.5
3,407,199	+		Ga0059261_3275	0.51	+0.1
3,407,199	+		Ga0059261_3275	0.51	+0.8
3,407,200	-		Ga0059261_3275	0.51	+0.3
3,407,277	+		Ga0059261_3275	0.56	+0.6
3,407,277	+		Ga0059261_3275	0.56	-0.3
3,407,278	-		Ga0059261_3275	0.56	+0.1
3,407,278	-		Ga0059261_3275	0.56	-1.7
3,407,278	-		Ga0059261_3275	0.56	-0.5
3,407,278	-		Ga0059261_3275	0.56	+0.1
3,407,348	+		Ga0059261_3275	0.61	+0.5
3,407,348	+		Ga0059261_3275	0.61	-0.3
3,407,349	-		Ga0059261_3275	0.61	+1.0
3,407,349	-		Ga0059261_3275	0.61	+0.4
3,407,349	-		Ga0059261_3275	0.61	+1.4
3,407,363	+		Ga0059261_3275	0.62	-0.3
3,407,363	+		Ga0059261_3275	0.62	-0.3
3,407,363	+		Ga0059261_3275	0.62	-0.4
3,407,363	+		Ga0059261_3275	0.62	+0.2
3,407,363	+		Ga0059261_3275	0.62	+0.4
3,407,364	-		Ga0059261_3275	0.62	+0.0
3,407,364	-		Ga0059261_3275	0.62	+0.1
3,407,364	-		Ga0059261_3275	0.62	+0.1
3,407,364	-		Ga0059261_3275	0.62	-0.6
3,407,364	-		Ga0059261_3275	0.62	-0.5
3,407,364	-		Ga0059261_3275	0.62	-0.5
3,407,364	-		Ga0059261_3275	0.62	+0.8
3,407,364	-		Ga0059261_3275	0.62	-0.0
3,407,364	-		Ga0059261_3275	0.62	+0.3
3,407,364	-				+0.2
3,407,375	+		Ga0059261_3275	0.63	-0.3
3,407,375	+		Ga0059261_3275	0.63	+0.3
3,407,375	+		Ga0059261_3275	0.63	+0.0
3,407,375	+		Ga0059261_3275	0.63	-0.0
3,407,375	+		Ga0059261_3275	0.63	+0.4
3,407,376	-		Ga0059261_3275	0.63	+0.7
3,407,376	-		Ga0059261_3275	0.63	-0.2
3,407,376	-		Ga0059261_3275	0.63	+0.7
3,407,648	+		Ga0059261_3275	0.80	-1.4
3,407,648	+		Ga0059261_3275	0.80	+1.0
3,407,648	+		Ga0059261_3275	0.80	+0.6
3,407,648	+		Ga0059261_3275	0.80	+0.0
3,407,649	-		Ga0059261_3275	0.80	-0.1
3,407,649	-		Ga0059261_3275	0.80	-0.4
3,407,727	+		Ga0059261_3275	0.85	+0.2
3,407,727	+				+0.4
3,407,727	+		Ga0059261_3275	0.85	-2.2
3,407,728	-		Ga0059261_3275	0.85	-0.3
3,407,728	-		Ga0059261_3275	0.85	+0.1
3,407,728	-		Ga0059261_3275	0.85	+0.2
3,407,940	+				-0.6
3,407,956	+				+0.1
3,407,957	-				+0.5
3,407,984	+				-0.0
3,407,984	+				-0.7
3,407,984	+				+0.2
3,408,032	+				+0.2
3,408,032	+				-0.2
3,408,032	+				-0.0
3,408,032	+				-0.3
3,408,032	+				+0.3
3,408,033	-				+0.7
3,408,033	-				-0.7
3,408,033	-				+0.2
3,408,066	+				+0.2
3,408,066	+				-0.4
3,408,066	+				-0.3
3,408,066	+				-0.0
3,408,066	+				+2.1
3,408,066	+				+0.0
3,408,066	+				+0.2
3,408,066	+				-0.1
3,408,067	-				-0.4
3,408,067	-				+1.0
3,408,067	-				+0.3
3,408,067	-				+0.2
3,408,067	-				-0.5
3,408,067	-				-2.5
3,408,114	+				+0.5
3,408,115	-				+0.0
3,408,163	+				+1.0
3,408,697	+		Ga0059261_3276	0.32	-0.6
3,408,697	+		Ga0059261_3276	0.32	-0.3
3,408,697	+		Ga0059261_3276	0.32	+0.4
3,408,697	+		Ga0059261_3276	0.32	-0.9
3,408,697	+		Ga0059261_3276	0.32	-0.2
3,408,697	+		Ga0059261_3276	0.32	-0.5
3,408,698	-		Ga0059261_3276	0.32	-0.7
3,408,698	-		Ga0059261_3276	0.32	-0.6
3,408,698	-		Ga0059261_3276	0.32	+0.0
3,408,698	-		Ga0059261_3276	0.32	-0.0
3,408,973	+		Ga0059261_3276	0.48	+0.0
3,408,973	+		Ga0059261_3276	0.48	-0.5
3,408,973	+				-0.0
3,409,072	+		Ga0059261_3276	0.53	-1.0
3,409,072	+		Ga0059261_3276	0.53	-0.2
3,409,073	-		Ga0059261_3276	0.53	-0.0
3,409,073	-		Ga0059261_3276	0.53	-0.7
3,409,378	+		Ga0059261_3276	0.70	+0.1
3,409,378	+		Ga0059261_3276	0.70	-0.7
3,409,379	-		Ga0059261_3276	0.70	-0.0
3,409,411	+		Ga0059261_3276	0.72	-0.8
3,409,411	+		Ga0059261_3276	0.72	-1.7
3,409,412	-		Ga0059261_3276	0.72	-0.0
3,409,412	-		Ga0059261_3276	0.72	-1.6
3,409,627	+		Ga0059261_3276	0.84	+0.3
3,409,627	+		Ga0059261_3276	0.84	-1.1
3,409,628	-		Ga0059261_3276	0.84	-2.0
3,409,628	-		Ga0059261_3276	0.84	-1.0
3,409,628	-		Ga0059261_3276	0.84	+0.1
3,409,628	-		Ga0059261_3276	0.84	-0.4
3,409,847	+				-0.4
3,409,848	-				+1.3
3,409,921	+				+0.8
3,409,922	-				-0.6
3,409,971	+				+0.2
3,409,971	+				-1.1
3,409,972	-				+0.7
3,410,005	+				+1.4
3,410,006	-				-0.1
3,410,007	+				-0.5
3,410,008	-				-0.2
3,410,008	-				+1.0
3,410,069	+				+0.3
3,410,069	+				-0.2
3,410,069	+				+0.6
3,410,069	+				-0.0
3,410,069	+				+0.1
3,410,069	+				-0.5
3,410,069	+				+2.5
3,410,069	+				+0.6
3,410,070	-				-0.3
3,410,070	-				+0.0
3,410,070	-				-0.3
3,410,070	-				-0.5
3,410,070	-				-0.8
3,410,070	-				-0.0
3,410,070	-				-1.2
3,410,070	-				+0.2
3,410,070	-				-0.2
3,410,078	+				-0.0
3,410,079	-				-0.0
3,410,079	-				+0.7
3,410,079	-				+0.5
3,410,079	-				-0.1
3,410,079	-				+0.1
3,410,168	+				-0.4
3,410,169	-				-0.5
3,410,169	-				-0.2
3,410,453	+		Ga0059261_3277	0.32	-1.1
3,410,454	-		Ga0059261_3277	0.32	+1.4
3,410,454	-		Ga0059261_3277	0.32	+0.2
3,410,519	+		Ga0059261_3277	0.37	-0.2
3,410,519	+		Ga0059261_3277	0.37	-1.2
3,410,519	+		Ga0059261_3277	0.37	+0.4
3,410,519	+		Ga0059261_3277	0.37	-0.3
3,410,519	+				-0.0
3,410,519	+		Ga0059261_3277	0.37	-0.3
3,410,519	+		Ga0059261_3277	0.37	+1.1
3,410,520	-		Ga0059261_3277	0.37	-0.4
3,410,528	+		Ga0059261_3277	0.38	+0.0
3,410,528	+		Ga0059261_3277	0.38	+0.1
3,410,529	-		Ga0059261_3277	0.38	+0.2
3,410,529	-		Ga0059261_3277	0.38	-0.8
3,410,529	-		Ga0059261_3277	0.38	-0.0
3,410,615	+		Ga0059261_3277	0.45	-0.2
3,410,616	-		Ga0059261_3277	0.45	-0.6
3,410,616	-		Ga0059261_3277	0.45	+0.8
3,410,616	-		Ga0059261_3277	0.45	+0.2
3,410,616	-		Ga0059261_3277	0.45	-1.0
3,410,789	+		Ga0059261_3277	0.59	-0.6
3,410,789	+		Ga0059261_3277	0.59	-0.4
3,410,789	+		Ga0059261_3277	0.59	+0.1
3,410,789	+		Ga0059261_3277	0.59	+1.5
3,410,790	-		Ga0059261_3277	0.59	+0.8
3,410,813	+		Ga0059261_3277	0.61	+1.0
3,410,813	+		Ga0059261_3277	0.61	+2.0