Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3216

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,347,758	+		Ga0059261_3214	0.63	+1.0
3,347,758	+		Ga0059261_3214	0.63	-0.9
3,347,758	+		Ga0059261_3214	0.63	+0.6
3,347,758	+		Ga0059261_3214	0.63	+0.2
3,347,758	+				-1.3
3,347,758	+		Ga0059261_3214	0.63	-0.6
3,347,759	-		Ga0059261_3214	0.64	+1.0
3,347,837	+		Ga0059261_3214	0.73	-0.6
3,347,838	-		Ga0059261_3214	0.73	-0.6
3,347,838	-		Ga0059261_3214	0.73	+0.2
3,347,838	-		Ga0059261_3214	0.73	-0.3
3,347,861	+		Ga0059261_3214	0.76	+0.5
3,347,861	+		Ga0059261_3214	0.76	-0.1
3,347,862	-				-1.0
3,347,862	-		Ga0059261_3214	0.76	-0.1
3,347,862	-		Ga0059261_3214	0.76	-0.9
3,348,017	+				-2.3
3,348,017	+				+0.5
3,348,017	+				-0.4
3,348,018	-				+0.2
3,348,018	-				+0.2
3,348,056	+				+0.5
3,348,056	+				+0.2
3,348,056	+				+0.0
3,348,057	-				+0.6
3,348,057	-				-0.0
3,348,057	-				-1.0
3,348,057	-				+1.0
3,348,152	+		Ga0059261_3215	0.13	+1.3
3,348,152	+		Ga0059261_3215	0.13	-0.6
3,348,193	-		Ga0059261_3215	0.19	-1.3
3,348,241	+		Ga0059261_3215	0.25	-0.8
3,348,241	+		Ga0059261_3215	0.25	+1.0
3,348,241	+		Ga0059261_3215	0.25	+0.1
3,348,242	-		Ga0059261_3215	0.26	-0.8
3,348,242	-		Ga0059261_3215	0.26	+1.8
3,348,242	-		Ga0059261_3215	0.26	-0.1
3,348,242	-		Ga0059261_3215	0.26	-0.4
3,348,242	-		Ga0059261_3215	0.26	-1.0
3,348,243	+		Ga0059261_3215	0.26	-0.3
3,348,243	+		Ga0059261_3215	0.26	+0.0
3,348,244	-		Ga0059261_3215	0.26	-0.6
3,348,244	-		Ga0059261_3215	0.26	-0.1
3,348,244	-		Ga0059261_3215	0.26	-0.1
3,348,244	-		Ga0059261_3215	0.26	-1.3
3,348,244	-		Ga0059261_3215	0.26	+0.3
3,348,244	-		Ga0059261_3215	0.26	-0.5
3,348,457	+		Ga0059261_3215	0.55	-0.8
3,348,458	-		Ga0059261_3215	0.56	+0.1
3,348,458	-		Ga0059261_3215	0.56	-0.5
3,348,492	+		Ga0059261_3215	0.60	+0.8
3,348,559	+		Ga0059261_3215	0.70	+0.2
3,348,559	+		Ga0059261_3215	0.70	-0.2
3,348,560	-				-1.8
3,348,868	+		Ga0059261_3216	0.21	-0.9
3,349,043	-		Ga0059261_3216	0.50	-0.4
3,349,201	+		Ga0059261_3216	0.77	-0.2
3,349,201	+		Ga0059261_3216	0.77	-1.0
3,349,201	+		Ga0059261_3216	0.77	+0.1
3,349,202	-		Ga0059261_3216	0.77	-0.3
3,349,202	-		Ga0059261_3216	0.77	+0.1
3,349,324	-				+0.3
3,350,221	-				+0.2
3,350,221	-				-1.4