Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3211

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,344,254	+		Ga0059261_3209	0.52	+0.6
3,344,254	+		Ga0059261_3209	0.52	-0.1
3,344,254	+		Ga0059261_3209	0.52	-0.8
3,344,254	+		Ga0059261_3209	0.52	-0.0
3,344,254	+		Ga0059261_3209	0.52	+0.2
3,344,254	+		Ga0059261_3209	0.52	+0.0
3,344,255	-		Ga0059261_3209	0.52	-0.3
3,344,255	-		Ga0059261_3209	0.52	+0.4
3,344,255	-		Ga0059261_3209	0.52	-1.2
3,344,255	-		Ga0059261_3209	0.52	-0.5
3,344,255	-		Ga0059261_3209	0.52	-0.7
3,344,256	+		Ga0059261_3209	0.52	-0.6
3,344,256	+		Ga0059261_3209	0.52	-2.2
3,344,279	-		Ga0059261_3209	0.55	-2.5
3,344,279	-		Ga0059261_3209	0.55	+1.6
3,344,358	-		Ga0059261_3209	0.67	+0.3
3,344,467	+		Ga0059261_3209	0.83	-0.4
3,344,468	-		Ga0059261_3209	0.83	+1.4
3,344,468	-		Ga0059261_3209	0.83	-0.0
3,344,567	-				-1.2
3,344,567	-				+0.7
3,344,600	+				-0.2
3,344,600	+				+0.0
3,344,600	+				+0.1
3,344,601	-				-0.3
3,344,601	-				+0.2
3,344,643	+				-2.5
3,344,643	+				+1.4
3,344,644	-				+1.0
3,345,045	+		Ga0059261_3210	0.71	-0.6
3,345,045	+		Ga0059261_3210	0.71	-0.1
3,345,046	-		Ga0059261_3210	0.71	-0.7
3,345,262	+				-0.6
3,345,262	+				-1.3
3,345,263	-				-1.3
3,345,263	-				-1.5
3,345,263	-				+1.0
3,345,263	-				+0.1
3,345,263	-				-1.1
3,345,263	-				+3.0
3,345,331	+		Ga0059261_3211	0.15	-0.2
3,345,332	-		Ga0059261_3211	0.15	-0.3
3,345,332	-		Ga0059261_3211	0.15	-0.2
3,345,334	+		Ga0059261_3211	0.15	-0.4
3,345,335	-		Ga0059261_3211	0.15	-0.8
3,345,335	-		Ga0059261_3211	0.15	-0.1
3,345,335	-		Ga0059261_3211	0.15	-0.9
3,345,335	-		Ga0059261_3211	0.15	-0.4
3,345,335	-		Ga0059261_3211	0.15	-0.8
3,345,508	+		Ga0059261_3211	0.41	-0.5
3,345,508	+		Ga0059261_3211	0.41	-0.6
3,345,508	+		Ga0059261_3211	0.41	+0.1
3,345,509	-		Ga0059261_3211	0.41	-0.9
3,345,509	-		Ga0059261_3211	0.41	-0.9
3,345,523	+		Ga0059261_3211	0.43	-0.8
3,345,524	-		Ga0059261_3211	0.43	-3.1
3,345,577	+		Ga0059261_3211	0.51	+1.4
3,345,578	-		Ga0059261_3211	0.51	-0.0
3,345,578	-		Ga0059261_3211	0.51	+0.6
3,345,578	-		Ga0059261_3211	0.51	-2.0
3,345,595	+		Ga0059261_3211	0.54	-1.7
3,345,595	+		Ga0059261_3211	0.54	-0.0
3,345,596	-		Ga0059261_3211	0.54	-0.4
3,345,596	-		Ga0059261_3211	0.54	-1.4
3,345,596	-		Ga0059261_3211	0.54	+0.3
3,345,596	-		Ga0059261_3211	0.54	-1.6
3,345,596	-		Ga0059261_3211	0.54	-0.9
3,345,596	-		Ga0059261_3211	0.54	-1.3
3,345,640	+		Ga0059261_3211	0.61	-1.2
3,345,640	+		Ga0059261_3211	0.61	-1.4
3,345,640	+				-0.0
3,345,641	-		Ga0059261_3211	0.61	-1.7
3,345,641	-		Ga0059261_3211	0.61	-2.4
3,345,641	-		Ga0059261_3211	0.61	-0.4
3,345,641	-		Ga0059261_3211	0.61	-0.0
3,345,826	+		Ga0059261_3211	0.88	-1.8
3,345,886	-				-0.0
3,345,886	-				-0.5
3,345,886	-				-0.8
3,345,886	-				-0.8
3,346,103	+				-1.3
3,346,103	+				-1.6
3,346,103	+				-1.4
3,346,103	+				-0.4
3,346,103	+				-0.3
3,346,103	+				+0.1
3,346,103	+				-0.7
3,346,104	-				-0.5
3,346,104	-				+0.3
3,346,104	-				-0.0
3,346,104	-				+0.4
3,346,104	-				-0.4
3,346,104	-				-0.3
3,346,352	+				+0.8
3,346,352	+				+0.7
3,346,352	+				-0.4
3,346,352	+				-1.2
3,346,353	-				-0.6
3,346,353	-				+0.4
3,346,417	+				+1.2
3,346,417	+				+0.6
3,346,417	+				-0.1
3,346,465	-				-0.2