Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3190

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,323,384	+				+0.4
3,323,384	+				-0.6
3,323,384	+				+0.1
3,323,384	+				+0.4
3,323,384	+				-0.6
3,323,385	-				-0.4
3,323,385	-				+1.0
3,323,385	-				-0.0
3,323,386	+				-0.5
3,323,386	+				-1.6
3,323,386	+				-0.3
3,323,386	+				-0.3
3,323,387	-				+0.7
3,323,387	-				+0.0
3,323,387	-				-1.2
3,323,416	+				+0.7
3,323,417	-				-0.0
3,323,480	+				-0.2
3,323,480	+				+0.9
3,323,480	+				+0.6
3,323,481	-				-0.8
3,323,584	+		Ga0059261_3189	0.13	-0.0
3,323,584	+		Ga0059261_3189	0.13	-0.4
3,323,585	-		Ga0059261_3189	0.13	-0.8
3,323,585	-		Ga0059261_3189	0.13	+0.2
3,323,594	+		Ga0059261_3189	0.14	+1.6
3,323,594	+		Ga0059261_3189	0.14	+0.2
3,323,594	+		Ga0059261_3189	0.14	+0.1
3,323,594	+		Ga0059261_3189	0.14	+0.7
3,323,594	+		Ga0059261_3189	0.14	-0.2
3,323,594	+		Ga0059261_3189	0.14	-0.4
3,323,594	+		Ga0059261_3189	0.14	-0.2
3,323,595	-		Ga0059261_3189	0.14	+1.0
3,323,595	-		Ga0059261_3189	0.14	-0.6
3,323,595	-		Ga0059261_3189	0.14	-0.3
3,323,595	-		Ga0059261_3189	0.14	-0.3
3,323,595	-		Ga0059261_3189	0.14	-0.3
3,323,595	-		Ga0059261_3189	0.14	-0.3
3,323,716	+		Ga0059261_3189	0.31	+1.0
3,323,716	+		Ga0059261_3189	0.31	-0.2
3,323,716	+		Ga0059261_3189	0.31	+0.5
3,323,717	-		Ga0059261_3189	0.31	+0.5
3,323,900	+		Ga0059261_3189	0.56	-0.3
3,323,900	+		Ga0059261_3189	0.56	+0.7
3,323,900	+		Ga0059261_3189	0.56	-0.6
3,323,901	-		Ga0059261_3189	0.56	-1.0
3,323,901	-		Ga0059261_3189	0.56	+1.0
3,324,101	-		Ga0059261_3189	0.83	-0.2
3,324,239	-				-1.7
3,324,270	+				-0.3
3,324,270	+				-1.1
3,324,270	+				-0.0
3,324,270	+				-0.0
3,324,270	+				-1.3
3,324,270	+				-0.5
3,324,270	+				-2.0
3,324,270	+				-1.2
3,324,270	+				+0.2
3,324,270	+				-0.8
3,324,270	+				-0.0
3,324,270	+				-1.1
3,324,270	+				-1.3
3,324,270	+				-1.4
3,324,270	+				+1.2
3,324,270	+				-0.1
3,324,270	+				-0.8
3,324,271	-				-0.2
3,324,271	-				-0.6
3,324,271	-				-1.3
3,324,271	-				-0.3
3,324,271	-				+0.2
3,324,271	-				-0.5
3,324,271	-				+0.4
3,324,271	-				-0.9
3,324,271	-				-1.0
3,324,271	-				-0.8
3,324,271	-				-1.0
3,324,271	-				-1.1
3,324,271	-				-0.6
3,324,271	-				-1.5
3,324,271	-				+0.2
3,324,271	-				-0.6
3,324,271	-				-1.6
3,324,271	-				-2.0
3,324,340	+				-2.7
3,324,341	-				-1.0
3,324,399	+		Ga0059261_3190	0.12	-1.6
3,324,399	+		Ga0059261_3190	0.12	+0.3
3,324,400	-		Ga0059261_3190	0.12	-0.8
3,324,400	-		Ga0059261_3190	0.12	-0.6
3,324,400	-		Ga0059261_3190	0.12	+1.0
3,324,436	+		Ga0059261_3190	0.16	-0.7
3,324,436	+		Ga0059261_3190	0.16	-1.1
3,324,436	+		Ga0059261_3190	0.16	-1.0
3,324,437	-		Ga0059261_3190	0.16	-1.3
3,324,437	-		Ga0059261_3190	0.16	-1.7
3,324,437	-		Ga0059261_3190	0.16	-0.2
3,324,442	+		Ga0059261_3190	0.16	-0.2
3,324,442	+		Ga0059261_3190	0.16	-0.6
3,324,644	+		Ga0059261_3190	0.35	+0.4
3,324,645	-		Ga0059261_3190	0.36	-0.8
3,324,678	+		Ga0059261_3190	0.39	+0.5
3,324,678	+		Ga0059261_3190	0.39	+0.3
3,324,678	+		Ga0059261_3190	0.39	-0.7
3,324,679	-		Ga0059261_3190	0.39	-1.0
3,324,679	-		Ga0059261_3190	0.39	-1.2
3,324,679	-		Ga0059261_3190	0.39	-0.5
3,324,679	-		Ga0059261_3190	0.39	+0.9
3,324,705	-		Ga0059261_3190	0.41	-0.5
3,324,744	+		Ga0059261_3190	0.45	-1.0
3,324,744	+		Ga0059261_3190	0.45	-1.5
3,324,744	+		Ga0059261_3190	0.45	-0.1
3,324,744	+		Ga0059261_3190	0.45	-2.2
3,324,744	+		Ga0059261_3190	0.45	-0.0
3,324,744	+		Ga0059261_3190	0.45	-0.7
3,324,744	+		Ga0059261_3190	0.45	+0.1
3,324,745	-		Ga0059261_3190	0.45	-0.9
3,324,745	-		Ga0059261_3190	0.45	+1.0
3,324,745	-		Ga0059261_3190	0.45	-0.2
3,324,745	-		Ga0059261_3190	0.45	-0.2
3,324,914	+		Ga0059261_3190	0.61	+0.5
3,324,914	+		Ga0059261_3190	0.61	-0.0
3,324,914	+		Ga0059261_3190	0.61	-0.5
3,324,914	+		Ga0059261_3190	0.61	-0.6
3,324,914	+		Ga0059261_3190	0.61	-1.1
3,324,914	+		Ga0059261_3190	0.61	+0.9
3,324,914	+		Ga0059261_3190	0.61	-0.1
3,324,914	+		Ga0059261_3190	0.61	-0.7
3,324,914	+				-0.6
3,324,914	+		Ga0059261_3190	0.61	-0.0
3,324,914	+		Ga0059261_3190	0.61	-0.2
3,324,914	+		Ga0059261_3190	0.61	-1.3
3,324,914	+		Ga0059261_3190	0.61	+1.0
3,324,915	-		Ga0059261_3190	0.61	-2.2
3,324,915	-		Ga0059261_3190	0.61	-1.2
3,324,915	-		Ga0059261_3190	0.61	-0.6
3,324,915	-		Ga0059261_3190	0.61	-0.5
3,324,915	-		Ga0059261_3190	0.61	-0.8
3,324,915	-		Ga0059261_3190	0.61	+1.4
3,324,915	-				+1.0
3,324,915	-		Ga0059261_3190	0.61	-1.1
3,324,915	-		Ga0059261_3190	0.61	-0.0
3,324,918	+		Ga0059261_3190	0.62	-0.2
3,324,918	+		Ga0059261_3190	0.62	-0.1
3,324,918	+		Ga0059261_3190	0.62	-0.8
3,324,918	+		Ga0059261_3190	0.62	+0.0
3,324,918	+		Ga0059261_3190	0.62	-0.9
3,324,918	+		Ga0059261_3190	0.62	-1.7
3,324,918	+		Ga0059261_3190	0.62	-0.8
3,324,918	+		Ga0059261_3190	0.62	-0.0
3,324,918	+		Ga0059261_3190	0.62	-1.3
3,324,918	+		Ga0059261_3190	0.62	-0.5
3,324,918	+		Ga0059261_3190	0.62	-0.1
3,324,918	+		Ga0059261_3190	0.62	-0.0
3,324,918	+		Ga0059261_3190	0.62	-0.0
3,324,918	+		Ga0059261_3190	0.62	-1.8
3,324,918	+		Ga0059261_3190	0.62	+0.5
3,324,918	+		Ga0059261_3190	0.62	-1.5
3,324,918	+		Ga0059261_3190	0.62	-1.2
3,324,918	+		Ga0059261_3190	0.62	-0.3
3,324,918	+		Ga0059261_3190	0.62	+0.1
3,324,918	+		Ga0059261_3190	0.62	-0.8
3,324,919	-		Ga0059261_3190	0.62	-0.0
3,324,919	-		Ga0059261_3190	0.62	-0.9
3,324,919	-		Ga0059261_3190	0.62	+1.0
3,324,919	-		Ga0059261_3190	0.62	-2.2
3,324,919	-		Ga0059261_3190	0.62	-0.8
3,324,919	-		Ga0059261_3190	0.62	-0.7
3,324,919	-		Ga0059261_3190	0.62	+0.2
3,324,919	-		Ga0059261_3190	0.62	+1.0
3,324,919	-		Ga0059261_3190	0.62	-0.6
3,324,919	-		Ga0059261_3190	0.62	-0.8
3,324,919	-		Ga0059261_3190	0.62	-1.2
3,324,919	-		Ga0059261_3190	0.62	-0.3
3,324,919	-		Ga0059261_3190	0.62	+0.2
3,324,919	-		Ga0059261_3190	0.62	-1.4
3,324,919	-		Ga0059261_3190	0.62	-1.2
3,324,919	-		Ga0059261_3190	0.62	-0.0
3,324,919	-		Ga0059261_3190	0.62	-0.8
3,324,919	-				-0.0
3,324,919	-		Ga0059261_3190	0.62	-1.2
3,324,919	-		Ga0059261_3190	0.62	-1.0
3,324,919	-		Ga0059261_3190	0.62	-1.0
3,324,919	-		Ga0059261_3190	0.62	+0.4
3,324,919	-		Ga0059261_3190	0.62	-1.3
3,324,919	-		Ga0059261_3190	0.62	-3.0
3,324,919	-		Ga0059261_3190	0.62	-1.0
3,324,919	-		Ga0059261_3190	0.62	-1.3
3,324,919	-		Ga0059261_3190	0.62	-1.9
3,324,919	-		Ga0059261_3190	0.62	-1.6
3,324,919	-		Ga0059261_3190	0.62	-2.3
3,324,919	-				-1.0
3,324,926	+		Ga0059261_3190	0.62	-0.6
3,324,999	-		Ga0059261_3190	0.69	-0.6
3,325,083	+		Ga0059261_3190	0.77	-1.6
3,325,083	+		Ga0059261_3190	0.77	+0.6
3,325,083	+		Ga0059261_3190	0.77	-0.1
3,325,084	-		Ga0059261_3190	0.77	-0.7
3,325,084	-		Ga0059261_3190	0.77	-1.2
3,325,084	-		Ga0059261_3190	0.77	-0.4
3,325,084	-		Ga0059261_3190	0.77	-0.8
3,325,084	-		Ga0059261_3190	0.77	-0.3
3,325,176	+		Ga0059261_3190	0.86	-0.3
3,325,991	+		Ga0059261_3191	0.61	-0.2
3,325,992	-		Ga0059261_3191	0.61	-0.0
3,326,108	+		Ga0059261_3191	0.72	-1.1
3,326,124	-		Ga0059261_3191	0.73	-0.1
3,326,124	-		Ga0059261_3191	0.73	+1.0
3,326,201	+		Ga0059261_3191	0.80	-1.3
3,326,201	+		Ga0059261_3191	0.80	-1.0
3,326,201	+				-0.6
3,326,201	+		Ga0059261_3191	0.80	-0.5
3,326,265	+		Ga0059261_3191	0.86	-1.0
3,326,265	+		Ga0059261_3191	0.86	+0.3
3,326,265	+		Ga0059261_3191	0.86	-1.0
3,326,265	+		Ga0059261_3191	0.86	-1.3
3,326,265	+		Ga0059261_3191	0.86	-1.8
3,326,266	-		Ga0059261_3191	0.86	-1.5
3,326,266	-		Ga0059261_3191	0.86	+0.4
3,326,266	-		Ga0059261_3191	0.86	-2.2
3,326,266	-		Ga0059261_3191	0.86	-1.8
3,326,266	-		Ga0059261_3191	0.86	-0.4
3,326,266	-		Ga0059261_3191	0.86	-0.2
3,326,266	-		Ga0059261_3191	0.86	-0.6
3,326,319	+				-1.6
3,326,319	+				-1.1
3,326,319	+				-1.0
3,326,319	+				-0.4
3,326,319	+				+0.3
3,326,319	+				-0.3