Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3128

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,268,228	+		Ga0059261_3127	0.20	+0.0
3,268,229	-		Ga0059261_3127	0.20	-0.2
3,268,242	+		Ga0059261_3127	0.21	-0.8
3,268,243	-				+2.0
3,268,367	+		Ga0059261_3127	0.32	+0.1
3,268,367	+		Ga0059261_3127	0.32	+1.3
3,268,367	+		Ga0059261_3127	0.32	-0.7
3,268,367	+		Ga0059261_3127	0.32	-0.5
3,268,368	-		Ga0059261_3127	0.32	-0.6
3,268,368	-		Ga0059261_3127	0.32	-1.5
3,268,368	-		Ga0059261_3127	0.32	-1.8
3,268,368	-		Ga0059261_3127	0.32	-0.2
3,268,368	-		Ga0059261_3127	0.32	-0.7
3,268,368	-				+1.0
3,268,368	-		Ga0059261_3127	0.32	+1.0
3,268,368	-		Ga0059261_3127	0.32	-1.2
3,268,369	+		Ga0059261_3127	0.32	-0.2
3,268,453	+		Ga0059261_3127	0.40	+1.0
3,268,453	+		Ga0059261_3127	0.40	+0.0
3,268,750	+		Ga0059261_3127	0.65	-0.6
3,268,750	+		Ga0059261_3127	0.65	-0.4
3,268,845	+		Ga0059261_3127	0.73	-1.8
3,269,166	+				-0.9
3,269,253	+				+0.0
3,269,254	-				+0.2
3,269,254	-				-0.3
3,269,259	+				-1.2
3,269,260	-				-2.1
3,269,265	+				+0.0
3,269,299	+				-1.3
3,269,299	+				-0.8
3,269,300	-				+0.4
3,269,478	+		Ga0059261_3128	0.12	+1.3
3,269,478	+		Ga0059261_3128	0.12	-1.0
3,269,479	-		Ga0059261_3128	0.12	-0.7
3,269,479	-		Ga0059261_3128	0.12	-1.0
3,269,479	-		Ga0059261_3128	0.12	+0.8
3,269,480	+		Ga0059261_3128	0.12	-0.4
3,269,480	+		Ga0059261_3128	0.12	-0.3
3,269,480	+		Ga0059261_3128	0.12	-0.7
3,269,480	+		Ga0059261_3128	0.12	-0.1
3,269,480	+		Ga0059261_3128	0.12	-0.6
3,269,480	+		Ga0059261_3128	0.12	+0.0
3,269,481	-		Ga0059261_3128	0.12	+0.1
3,269,481	-		Ga0059261_3128	0.12	-1.0
3,269,639	+		Ga0059261_3128	0.20	+0.0
3,269,639	+		Ga0059261_3128	0.20	+0.0
3,269,640	-		Ga0059261_3128	0.20	-1.1
3,269,640	-		Ga0059261_3128	0.20	-0.1
3,269,640	-		Ga0059261_3128	0.20	-0.2
3,269,720	-		Ga0059261_3128	0.23	+0.8
3,269,720	-		Ga0059261_3128	0.23	+0.1
3,269,720	-		Ga0059261_3128	0.23	-1.3
3,269,720	-		Ga0059261_3128	0.23	+0.6
3,270,121	+		Ga0059261_3128	0.42	-0.7
3,270,121	+		Ga0059261_3128	0.42	-1.1
3,270,122	-		Ga0059261_3128	0.42	-0.4
3,270,122	-		Ga0059261_3128	0.42	-0.8
3,270,122	-		Ga0059261_3128	0.42	-0.3
3,270,156	+		Ga0059261_3128	0.43	+0.7
3,270,177	+		Ga0059261_3128	0.44	+0.1
3,270,178	-		Ga0059261_3128	0.44	-0.7
3,270,178	-		Ga0059261_3128	0.44	-2.0
3,270,211	-		Ga0059261_3128	0.46	-0.7
3,270,211	-		Ga0059261_3128	0.46	-1.0
3,270,211	-		Ga0059261_3128	0.46	-2.3
3,270,211	-		Ga0059261_3128	0.46	+0.0
3,270,211	-		Ga0059261_3128	0.46	+0.7
3,270,211	-		Ga0059261_3128	0.46	-1.2
3,270,219	+		Ga0059261_3128	0.46	-0.3
3,270,219	+		Ga0059261_3128	0.46	-0.6
3,270,219	+		Ga0059261_3128	0.46	-0.3
3,270,219	+		Ga0059261_3128	0.46	-0.2
3,270,220	-		Ga0059261_3128	0.46	-0.6
3,270,220	-		Ga0059261_3128	0.46	-1.0
3,270,220	-		Ga0059261_3128	0.46	-0.8
3,270,313	-		Ga0059261_3128	0.50	-1.0
3,270,313	-		Ga0059261_3128	0.50	+0.2
3,270,397	+		Ga0059261_3128	0.54	-0.3
3,270,397	+		Ga0059261_3128	0.54	-1.7
3,270,397	+		Ga0059261_3128	0.54	+0.6
3,270,441	+		Ga0059261_3128	0.56	-0.1
3,270,562	+		Ga0059261_3128	0.62	-0.6
3,270,562	+		Ga0059261_3128	0.62	+0.0
3,270,562	+		Ga0059261_3128	0.62	-2.0
3,270,563	-		Ga0059261_3128	0.62	-0.3
3,270,563	-		Ga0059261_3128	0.62	-0.6
3,270,678	+		Ga0059261_3128	0.67	-0.6
3,270,678	+		Ga0059261_3128	0.67	-0.5
3,270,678	+		Ga0059261_3128	0.67	-1.6
3,270,678	+		Ga0059261_3128	0.67	-0.4
3,270,678	+		Ga0059261_3128	0.67	-0.4
3,270,678	+		Ga0059261_3128	0.67	-0.7
3,270,678	+		Ga0059261_3128	0.67	+0.2
3,270,678	+		Ga0059261_3128	0.67	+0.0
3,270,678	+		Ga0059261_3128	0.67	+0.2
3,270,679	-		Ga0059261_3128	0.67	-0.5
3,270,679	-		Ga0059261_3128	0.67	-2.0
3,270,679	-		Ga0059261_3128	0.67	+0.6
3,270,679	-				-1.0
3,270,679	-		Ga0059261_3128	0.67	-1.3
3,270,679	-		Ga0059261_3128	0.67	-0.4
3,270,679	-		Ga0059261_3128	0.67	-0.6
3,270,679	-		Ga0059261_3128	0.67	-1.6
3,270,679	-		Ga0059261_3128	0.67	-1.7
3,270,679	-		Ga0059261_3128	0.67	-0.6
3,270,720	-		Ga0059261_3128	0.69	-0.7
3,270,740	+		Ga0059261_3128	0.70	+0.2
3,270,740	+		Ga0059261_3128	0.70	-1.5
3,270,740	+		Ga0059261_3128	0.70	-0.7
3,270,740	+				+1.0
3,270,741	-		Ga0059261_3128	0.70	+0.4
3,270,741	-		Ga0059261_3128	0.70	-0.6
3,270,741	-		Ga0059261_3128	0.70	-0.7
3,270,741	-		Ga0059261_3128	0.70	+0.3
3,270,741	-		Ga0059261_3128	0.70	+0.4
3,270,834	-		Ga0059261_3128	0.74	-0.2
3,270,855	+		Ga0059261_3128	0.75	-1.3
3,270,856	-		Ga0059261_3128	0.75	+0.4
3,270,856	-		Ga0059261_3128	0.75	+0.0
3,270,856	-		Ga0059261_3128	0.75	+0.7
3,271,095	+		Ga0059261_3128	0.86	-1.7
3,271,095	+		Ga0059261_3128	0.86	-2.0
3,271,095	+		Ga0059261_3128	0.86	+0.1
3,271,096	-		Ga0059261_3128	0.86	-0.8
3,271,107	+		Ga0059261_3128	0.86	+0.4
3,271,108	-		Ga0059261_3128	0.86	-1.1
3,271,108	-		Ga0059261_3128	0.86	+0.0
3,271,108	-		Ga0059261_3128	0.86	-0.6
3,271,156	+		Ga0059261_3128	0.89	-0.8
3,271,156	+		Ga0059261_3128	0.89	-0.6
3,271,157	-		Ga0059261_3128	0.89	-1.5
3,271,206	+				-0.6
3,271,206	+				-0.6
3,271,206	+				-0.8
3,271,207	-				-0.6
3,271,207	-				-0.3
3,271,207	-				+1.0
3,271,305	+				-1.4
3,271,305	+				-0.7
3,271,417	+				-1.2
3,271,417	+				+0.0
3,271,417	+				+0.0
3,271,417	+				-0.3
3,271,417	+				+0.5
3,271,418	-				-0.1
3,271,418	-				-1.2
3,271,418	-				-0.9
3,271,418	-				-0.4
3,271,418	-				-0.9
3,271,418	-				+0.9
3,271,418	-				+0.0
3,271,418	-				+0.3
3,271,587	+		Ga0059261_3129	0.22	-0.7
3,271,587	+		Ga0059261_3129	0.22	-0.2
3,271,588	-		Ga0059261_3129	0.22	+1.0
3,271,589	+		Ga0059261_3129	0.22	-0.6
3,271,589	+		Ga0059261_3129	0.22	-0.6
3,271,589	+		Ga0059261_3129	0.22	+2.6
3,271,589	+		Ga0059261_3129	0.22	+0.3
3,271,589	+		Ga0059261_3129	0.22	-0.7
3,271,590	-		Ga0059261_3129	0.22	+1.2
3,271,590	-		Ga0059261_3129	0.22	-0.3
3,271,590	-		Ga0059261_3129	0.22	-0.9
3,271,590	-		Ga0059261_3129	0.22	-0.7
3,271,590	-		Ga0059261_3129	0.22	+0.0
3,271,590	-		Ga0059261_3129	0.22	+0.0
3,271,601	+		Ga0059261_3129	0.24	+0.0
3,271,602	-		Ga0059261_3129	0.24	-0.4
3,271,805	+		Ga0059261_3129	0.52	-0.8
3,271,805	+		Ga0059261_3129	0.52	+0.5
3,271,805	+		Ga0059261_3129	0.52	-0.7
3,271,805	+		Ga0059261_3129	0.52	-1.1
3,271,805	+		Ga0059261_3129	0.52	-0.6
3,271,805	+		Ga0059261_3129	0.52	-1.0
3,271,805	+		Ga0059261_3129	0.52	+0.5
3,271,805	+		Ga0059261_3129	0.52	-0.6
3,271,805	+		Ga0059261_3129	0.52	-0.8
3,271,805	+		Ga0059261_3129	0.52	-0.6
3,271,805	+		Ga0059261_3129	0.52	-0.8
3,271,805	+		Ga0059261_3129	0.52	-0.2
3,271,805	+		Ga0059261_3129	0.52	-2.7
3,271,806	-		Ga0059261_3129	0.52	+0.2
3,271,806	-		Ga0059261_3129	0.52	-1.2
3,271,806	-		Ga0059261_3129	0.52	+1.2
3,271,806	-		Ga0059261_3129	0.52	+0.2
3,271,806	-		Ga0059261_3129	0.52	-2.2
3,271,806	-		Ga0059261_3129	0.52	-2.0
3,271,806	-		Ga0059261_3129	0.52	-2.3
3,271,806	-		Ga0059261_3129	0.52	+1.0
3,271,806	-		Ga0059261_3129	0.52	+0.1
3,271,806	-		Ga0059261_3129	0.52	-0.6
3,271,874	-		Ga0059261_3129	0.62	+0.5
3,271,988	+		Ga0059261_3129	0.77	-0.9
3,271,988	+		Ga0059261_3129	0.77	-1.1
3,271,989	-		Ga0059261_3129	0.77	-1.3
3,271,989	-		Ga0059261_3129	0.77	-1.2
3,271,989	-		Ga0059261_3129	0.77	-1.6
3,272,010	+		Ga0059261_3129	0.80	+0.2
3,272,010	+		Ga0059261_3129	0.80	+1.7
3,272,010	+		Ga0059261_3129	0.80	-0.1
3,272,010	+		Ga0059261_3129	0.80	-1.2
3,272,010	+		Ga0059261_3129	0.80	-0.3
3,272,010	+		Ga0059261_3129	0.80	-1.0
3,272,011	-		Ga0059261_3129	0.80	+0.4
3,272,133	+				-0.9
3,272,133	+				+2.6
3,272,151	+				+0.1
3,272,151	+				+0.3
3,272,151	+				+0.0
3,272,151	+				+0.4
3,272,151	+				-1.7
3,272,151	+				+0.0
3,272,151	+				+0.0
3,272,151	+				+0.0
3,272,152	-				+0.7
3,272,152	-				-0.3
3,272,152	-				-1.6
3,272,152	-				+0.0
3,272,152	-				+0.7
3,272,152	-				+0.0
3,272,152	-				+0.2
3,272,152	-				+1.0
3,272,154	+				+0.1
3,272,154	+				+0.3
3,272,154	+				+1.0
3,272,155	-				-0.3
3,272,155	-				+1.0
3,272,155	-				+0.9
3,272,155	-				-1.0
3,272,159	+				-1.4
3,272,159	+				+0.4
3,272,160	-				+1.3
3,272,304	-		Ga0059261_3130	0.10	-0.6