Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3103
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
---|---|---|---|---|---|
remove | |||||
3,239,681 | + | +1.0 | |||
3,239,773 | + | Ga0059261_3102 | 0.34 | -0.7 | |
3,239,941 | - | Ga0059261_3102 | 0.49 | -1.2 | |
3,240,189 | - | Ga0059261_3102 | 0.70 | -1.3 | |
3,240,455 | + | -0.4 | |||
3,240,455 | + | -1.8 | |||
3,240,455 | + | +0.7 | |||
3,240,455 | + | +1.3 | |||
3,240,456 | - | -0.6 | |||
3,240,583 | + | -0.4 | |||
3,240,584 | - | +0.0 | |||
3,240,825 | + | Ga0059261_3103 | 0.24 | +1.0 | |
3,240,825 | + | Ga0059261_3103 | 0.24 | -1.8 | |
3,240,981 | - | Ga0059261_3103 | 0.37 | -3.2 | |
3,241,252 | + | Ga0059261_3103 | 0.59 | -0.7 | |
3,241,253 | - | Ga0059261_3103 | 0.59 | -1.0 | |
3,241,492 | + | Ga0059261_3103 | 0.79 | -0.4 | |
3,241,493 | - | Ga0059261_3103 | 0.79 | +1.0 | |
3,241,493 | - | +1.0 | |||
3,241,493 | - | Ga0059261_3103 | 0.79 | -1.1 | |
3,241,493 | - | -0.3 | |||
3,241,493 | - | Ga0059261_3103 | 0.79 | -0.6 | |
3,241,534 | + | Ga0059261_3103 | 0.82 | -0.7 | |
3,241,534 | + | Ga0059261_3103 | 0.82 | +0.3 | |
3,241,534 | + | Ga0059261_3103 | 0.82 | +2.6 | |
3,241,534 | + | +1.0 | |||
3,241,535 | - | Ga0059261_3103 | 0.82 | -1.1 | |
3,241,535 | - | Ga0059261_3103 | 0.82 | +0.3 | |
3,241,535 | - | Ga0059261_3103 | 0.82 | -0.7 | |
3,242,359 | + | Ga0059261_3104 | 0.37 | +0.4 | |
3,242,707 | + | -1.3 |
Or see this region's nucleotide sequence