Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3101

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,237,178	-		Ga0059261_3100	0.30	-0.1
3,237,178	-		Ga0059261_3100	0.30	+0.1
3,237,226	+		Ga0059261_3100	0.33	-0.3
3,237,426	+		Ga0059261_3100	0.49	-0.8
3,237,426	+		Ga0059261_3100	0.49	-1.3
3,237,426	+		Ga0059261_3100	0.49	+2.0
3,237,426	+		Ga0059261_3100	0.49	+1.0
3,237,427	-		Ga0059261_3100	0.49	-0.6
3,237,427	-		Ga0059261_3100	0.49	-0.6
3,237,427	-		Ga0059261_3100	0.49	+0.2
3,237,504	+		Ga0059261_3100	0.54	-0.5
3,237,505	-		Ga0059261_3100	0.55	+0.0
3,237,505	-		Ga0059261_3100	0.55	+0.1
3,237,519	+		Ga0059261_3100	0.56	+0.4
3,237,519	+		Ga0059261_3100	0.56	-0.2
3,237,519	+				+1.6
3,237,519	+		Ga0059261_3100	0.56	-1.6
3,237,520	-		Ga0059261_3100	0.56	-1.6
3,237,520	-		Ga0059261_3100	0.56	-0.7
3,237,520	-		Ga0059261_3100	0.56	-0.7
3,237,520	-		Ga0059261_3100	0.56	+0.6
3,237,520	-		Ga0059261_3100	0.56	-0.4
3,237,566	-		Ga0059261_3100	0.59	+0.3
3,237,645	+		Ga0059261_3100	0.65	+0.3
3,237,645	+		Ga0059261_3100	0.65	+0.0
3,237,645	+		Ga0059261_3100	0.65	-0.6
3,237,646	-		Ga0059261_3100	0.65	+0.5
3,237,646	-		Ga0059261_3100	0.65	+1.0
3,237,702	-		Ga0059261_3100	0.70	-0.5
3,237,879	+		Ga0059261_3100	0.83	-0.8
3,237,880	-		Ga0059261_3100	0.83	+1.0
3,237,880	-		Ga0059261_3100	0.83	+0.7
3,237,880	-		Ga0059261_3100	0.83	+1.6
3,237,880	-		Ga0059261_3100	0.83	-0.1
3,237,880	-		Ga0059261_3100	0.83	-1.2
3,237,892	+		Ga0059261_3100	0.84	+0.6
3,237,892	+		Ga0059261_3100	0.84	+0.1
3,237,892	+		Ga0059261_3100	0.84	+1.0
3,237,892	+		Ga0059261_3100	0.84	-0.3
3,237,892	+		Ga0059261_3100	0.84	+0.3
3,237,893	-		Ga0059261_3100	0.84	+0.2
3,237,893	-		Ga0059261_3100	0.84	+1.7
3,237,900	+		Ga0059261_3100	0.85	+0.8
3,237,900	+		Ga0059261_3100	0.85	+0.3
3,237,900	+		Ga0059261_3100	0.85	+0.7
3,237,900	+		Ga0059261_3100	0.85	+0.0
3,237,900	+		Ga0059261_3100	0.85	+0.2
3,237,900	+		Ga0059261_3100	0.85	-0.7
3,238,000	-				-1.3
3,238,008	+				-1.0
3,238,008	+				-1.1
3,238,008	+				-0.3
3,238,008	+				-0.9
3,238,008	+				-0.2
3,238,009	-				+0.5
3,238,009	-				+0.0
3,238,009	-				-1.0
3,238,009	-				-0.3
3,238,009	-				-0.6
3,238,009	-				-1.6
3,238,009	-				+0.1
3,238,009	-				+0.3
3,238,009	-				-1.0
3,238,009	-				-1.3
3,238,011	+				-0.3
3,238,011	+				-0.2
3,238,011	+				+1.3
3,238,011	+				-0.6
3,238,011	+				+0.8
3,238,011	+				-0.5
3,238,011	+				+1.6
3,238,012	-				-0.8
3,238,012	-				-0.8
3,238,012	-				+0.0
3,238,013	+				-0.6
3,238,013	+				+0.5
3,238,014	-				-2.2
3,238,107	+				+0.7
3,238,107	+				+0.4
3,238,107	+				-0.3
3,238,107	+				-0.4
3,238,107	+				-0.3
3,238,107	+				-0.0
3,238,108	-				-0.1
3,238,288	+		Ga0059261_3101	0.12	-1.3
3,238,288	+		Ga0059261_3101	0.12	-0.2
3,238,289	-		Ga0059261_3101	0.12	-0.2
3,238,289	-		Ga0059261_3101	0.12	-0.3
3,238,289	-		Ga0059261_3101	0.12	+0.4
3,238,676	+		Ga0059261_3101	0.43	-0.8
3,238,677	-				+2.0
3,238,821	+		Ga0059261_3101	0.55	-1.6
3,238,821	+		Ga0059261_3101	0.55	-0.6
3,238,914	-		Ga0059261_3101	0.62	+1.0
3,238,929	+		Ga0059261_3101	0.64	-0.6
3,238,929	+		Ga0059261_3101	0.64	-1.3
3,238,930	-		Ga0059261_3101	0.64	-1.2
3,238,971	-		Ga0059261_3101	0.67	+0.0
3,238,971	-				-1.3
3,239,079	+		Ga0059261_3101	0.76	-0.2
3,239,079	+		Ga0059261_3101	0.76	-2.6
3,239,080	-		Ga0059261_3101	0.76	-2.2
3,239,080	-		Ga0059261_3101	0.76	+0.0
3,239,080	-		Ga0059261_3101	0.76	+3.0
3,239,339	-				-0.3
3,239,340	+				-1.3
3,239,340	+				-0.3
3,239,340	+				+1.0
3,239,432	+				-1.5
3,239,432	+				+0.3
3,239,681	+				+1.0
3,239,773	+		Ga0059261_3102	0.34	-0.7
3,239,941	-		Ga0059261_3102	0.49	-1.2
3,240,189	-		Ga0059261_3102	0.70	-1.3