Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3029

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,162,321	-		Ga0059261_3027	0.63	+0.4
3,162,321	-		Ga0059261_3027	0.63	+0.9
3,162,353	-				+0.3
3,162,362	-		Ga0059261_3027	0.73	-0.7
3,162,362	-		Ga0059261_3027	0.73	+0.3
3,162,410	-		Ga0059261_3027	0.85	+0.4
3,162,489	-				+1.9
3,162,489	-				-0.3
3,162,495	+				+0.5
3,162,495	+				+1.0
3,162,496	-				+0.1
3,162,496	-				+3.3
3,162,506	+				-0.3
3,162,506	+				+0.4
3,162,507	-				+0.6
3,162,507	-				-0.5
3,162,508	+				-0.6
3,162,508	+				-1.2
3,162,508	+				-0.8
3,162,508	+				+0.4
3,162,509	-				+0.8
3,162,533	+				+0.2
3,162,729	+		Ga0059261_3028	0.28	-1.0
3,162,729	+		Ga0059261_3028	0.28	+0.5
3,162,729	+		Ga0059261_3028	0.28	-0.1
3,162,729	+		Ga0059261_3028	0.28	+0.1
3,162,729	+		Ga0059261_3028	0.28	+0.0
3,162,729	+		Ga0059261_3028	0.28	-0.1
3,162,729	+		Ga0059261_3028	0.28	-0.2
3,162,729	+		Ga0059261_3028	0.28	+0.5
3,162,729	+		Ga0059261_3028	0.28	+0.1
3,162,729	+		Ga0059261_3028	0.28	-0.7
3,162,729	+		Ga0059261_3028	0.28	+0.1
3,162,729	+		Ga0059261_3028	0.28	+0.4
3,162,729	+		Ga0059261_3028	0.28	-0.5
3,162,729	+		Ga0059261_3028	0.28	+0.2
3,162,729	+		Ga0059261_3028	0.28	-2.0
3,162,729	+		Ga0059261_3028	0.28	+1.4
3,162,729	+		Ga0059261_3028	0.28	-0.5
3,162,730	-		Ga0059261_3028	0.28	+0.3
3,162,730	-		Ga0059261_3028	0.28	-0.3
3,162,730	-		Ga0059261_3028	0.28	-0.7
3,162,730	-		Ga0059261_3028	0.28	-1.0
3,162,730	-		Ga0059261_3028	0.28	+1.2
3,162,730	-		Ga0059261_3028	0.28	-0.5
3,162,730	-		Ga0059261_3028	0.28	-0.8
3,162,730	-		Ga0059261_3028	0.28	-0.1
3,162,730	-		Ga0059261_3028	0.28	-0.0
3,162,730	-		Ga0059261_3028	0.28	-1.6
3,162,730	-		Ga0059261_3028	0.28	+0.9
3,162,730	-		Ga0059261_3028	0.28	+1.2
3,162,822	+		Ga0059261_3028	0.42	+2.2
3,162,822	+		Ga0059261_3028	0.42	-1.1
3,162,822	+		Ga0059261_3028	0.42	+1.3
3,162,822	+		Ga0059261_3028	0.42	-0.3
3,162,822	+		Ga0059261_3028	0.42	+0.2
3,162,822	+		Ga0059261_3028	0.42	-0.3
3,162,822	+				-0.6
3,162,822	+		Ga0059261_3028	0.42	+0.7
3,162,823	-		Ga0059261_3028	0.42	-0.7
3,162,823	-		Ga0059261_3028	0.42	-0.0
3,162,823	-		Ga0059261_3028	0.42	+0.5
3,162,823	-		Ga0059261_3028	0.42	-0.4
3,162,823	-		Ga0059261_3028	0.42	-0.6
3,162,823	-		Ga0059261_3028	0.42	+0.4
3,162,823	-		Ga0059261_3028	0.42	+0.1
3,162,860	+		Ga0059261_3028	0.48	+0.3
3,162,861	-		Ga0059261_3028	0.48	-1.0
3,162,861	-		Ga0059261_3028	0.48	+0.3
3,162,861	-		Ga0059261_3028	0.48	+0.2
3,162,897	-		Ga0059261_3028	0.54	+0.5
3,163,008	-		Ga0059261_3028	0.70	+0.4
3,163,008	-		Ga0059261_3028	0.70	+0.5
3,163,171	+				+1.5
3,163,171	+				-1.0
3,163,171	+				+0.7
3,163,172	-				+0.1
3,163,172	-				+0.0
3,163,203	+				+0.2
3,163,203	+				+0.9
3,163,203	+				+0.1
3,163,203	+				+0.2
3,163,203	+				-0.5
3,163,203	+				+0.5
3,163,203	+				-0.9
3,163,203	+				+0.1
3,163,203	+				-0.5
3,163,203	+				+1.3
3,163,203	+				+0.1
3,163,203	+				+0.0
3,163,203	+				+0.4
3,163,204	-				-1.2
3,163,204	-				+0.0
3,163,204	-				+1.6
3,163,204	-				+1.0
3,163,204	-				-0.6
3,163,204	-				+0.6
3,163,317	-		Ga0059261_3029	0.20	+1.0
3,163,317	-		Ga0059261_3029	0.20	-1.7
3,163,317	-		Ga0059261_3029	0.20	+0.2
3,163,338	+		Ga0059261_3029	0.25	+0.1
3,163,339	-		Ga0059261_3029	0.25	-0.6
3,163,339	-		Ga0059261_3029	0.25	+0.0
3,163,525	+				+0.0
3,163,525	+		Ga0059261_3029	0.69	+0.0
3,163,526	-		Ga0059261_3029	0.69	-0.1
3,163,540	+		Ga0059261_3029	0.72	-0.2
3,163,540	+		Ga0059261_3029	0.72	-1.1
3,163,540	+		Ga0059261_3029	0.72	+0.1
3,163,540	+		Ga0059261_3029	0.72	+0.4
3,163,540	+		Ga0059261_3029	0.72	-0.0
3,163,540	+		Ga0059261_3029	0.72	+0.2
3,163,540	+		Ga0059261_3029	0.72	+0.4
3,163,540	+		Ga0059261_3029	0.72	+0.6
3,163,540	+		Ga0059261_3029	0.72	+0.1
3,163,540	+		Ga0059261_3029	0.72	+0.3
3,163,540	+		Ga0059261_3029	0.72	+0.5
3,163,540	+		Ga0059261_3029	0.72	+0.8
3,163,540	+		Ga0059261_3029	0.72	+0.3
3,163,540	+		Ga0059261_3029	0.72	-1.8
3,163,540	+		Ga0059261_3029	0.72	+0.0
3,163,541	-		Ga0059261_3029	0.72	-0.1
3,163,541	-		Ga0059261_3029	0.72	-0.5
3,163,541	-		Ga0059261_3029	0.72	-0.6
3,163,541	-		Ga0059261_3029	0.72	+0.1
3,163,541	-		Ga0059261_3029	0.72	-0.6
3,163,541	-		Ga0059261_3029	0.72	-0.1
3,163,541	-		Ga0059261_3029	0.72	+0.2
3,163,541	-		Ga0059261_3029	0.72	-0.3
3,163,541	-		Ga0059261_3029	0.72	-0.5
3,163,541	-		Ga0059261_3029	0.72	+0.1
3,163,541	-		Ga0059261_3029	0.72	+1.0
3,163,544	+		Ga0059261_3029	0.73	-0.1
3,163,544	+		Ga0059261_3029	0.73	+0.3
3,163,544	+		Ga0059261_3029	0.73	-0.0
3,163,544	+		Ga0059261_3029	0.73	+0.1
3,163,545	-		Ga0059261_3029	0.73	-0.7
3,163,545	-		Ga0059261_3029	0.73	-0.1
3,163,680	+				+0.5
3,163,680	+				-0.2
3,163,680	+				+0.2
3,163,680	+				+0.1
3,163,681	-				-0.3
3,163,681	-				-1.3
3,163,681	-				-0.1
3,163,681	-				+0.4
3,163,681	-				+0.2
3,163,681	-				+0.4
3,163,681	-				-0.4
3,163,681	-				+0.1
3,163,681	-				-0.1
3,164,032	+		Ga0059261_3030	0.63	+0.1
3,164,196	+		Ga0059261_3031	0.13	-1.2
3,164,196	+		Ga0059261_3031	0.13	-0.9
3,164,197	-		Ga0059261_3031	0.13	-0.3
3,164,197	-		Ga0059261_3031	0.13	+0.3
3,164,209	+		Ga0059261_3031	0.15	+0.6
3,164,209	+		Ga0059261_3031	0.15	+0.2
3,164,209	+		Ga0059261_3031	0.15	-0.8
3,164,210	-		Ga0059261_3031	0.16	+0.2
3,164,321	+		Ga0059261_3031	0.39	+0.2
3,164,321	+		Ga0059261_3031	0.39	-1.9
3,164,456	+		Ga0059261_3031	0.68	-0.1
3,164,456	+		Ga0059261_3031	0.68	+0.2
3,164,456	+		Ga0059261_3031	0.68	-0.5
3,164,457	-		Ga0059261_3031	0.68	-0.4
3,164,462	+		Ga0059261_3031	0.69	-0.5
3,164,462	+		Ga0059261_3031	0.69	+0.6
3,164,463	-		Ga0059261_3031	0.70	-0.4
3,164,577	+				+0.2
3,164,578	-				-0.2
3,164,578	-				+0.2
3,164,618	+				+0.3
3,164,618	+				-0.2
3,164,618	+				+0.3
3,164,618	+				+0.0
3,164,618	+				+0.0
3,164,618	+				-0.4
3,164,619	-				+0.3
3,164,619	-				-0.3
3,164,619	-				+0.1