Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2490

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,582,086	+				+0.1
2,582,086	+				+0.1
2,582,111	+				-0.3
2,582,112	-				-0.5
2,582,112	-				-0.3
2,582,112	-				-0.8
2,582,129	+				+1.1
2,582,129	+				-0.9
2,582,130	-				+0.8
2,582,156	-				-0.1
2,582,220	+				+0.3
2,582,221	-				+0.7
2,582,256	+		Ga0059261_2489	0.13	+0.3
2,582,256	+		Ga0059261_2489	0.13	+1.3
2,582,256	+		Ga0059261_2489	0.13	+0.4
2,582,257	-				+1.1
2,582,257	-		Ga0059261_2489	0.14	-0.1
2,582,257	-		Ga0059261_2489	0.14	+0.4
2,582,325	+		Ga0059261_2489	0.27	+0.6
2,582,326	-		Ga0059261_2489	0.27	+0.5
2,582,337	+		Ga0059261_2489	0.29	+0.1
2,582,337	+				+0.1
2,582,337	+		Ga0059261_2489	0.29	+0.0
2,582,340	+		Ga0059261_2489	0.30	-0.6
2,582,340	+		Ga0059261_2489	0.30	+1.8
2,582,340	+		Ga0059261_2489	0.30	-0.8
2,582,340	+				+0.1
2,582,340	+		Ga0059261_2489	0.30	-0.1
2,582,340	+		Ga0059261_2489	0.30	-0.2
2,582,340	+		Ga0059261_2489	0.30	-0.2
2,582,341	-		Ga0059261_2489	0.30	+0.2
2,582,341	-		Ga0059261_2489	0.30	-0.7
2,582,341	-		Ga0059261_2489	0.30	+0.2
2,582,376	+		Ga0059261_2489	0.36	-0.3
2,582,376	+		Ga0059261_2489	0.36	-0.4
2,582,376	+		Ga0059261_2489	0.36	-0.3
2,582,376	+		Ga0059261_2489	0.36	+0.1
2,582,376	-		Ga0059261_2489	0.36	+1.1
2,582,377	-		Ga0059261_2489	0.37	-0.1
2,582,377	-		Ga0059261_2489	0.37	-0.0
2,582,377	-		Ga0059261_2489	0.37	-1.3
2,582,377	-		Ga0059261_2489	0.37	+1.1
2,582,377	-		Ga0059261_2489	0.37	+0.9
2,582,379	+		Ga0059261_2489	0.37	+0.3
2,582,380	-		Ga0059261_2489	0.37	-0.2
2,582,380	-		Ga0059261_2489	0.37	-1.8
2,582,554	-		Ga0059261_2489	0.70	+0.3
2,582,759	+				-0.3
2,582,759	+				-1.4
2,582,759	+				-0.3
2,582,759	+				+0.2
2,582,759	+				-0.5
2,582,759	+				-0.7
2,582,760	-				+0.4
2,582,760	-				-0.6
2,582,760	-				+1.2
2,582,760	-				+0.3
2,582,823	+				+0.2
2,582,823	+				+0.2
2,582,873	-		Ga0059261_2490	0.11	-0.4
2,583,054	+		Ga0059261_2490	0.50	-2.1
2,583,054	+				+0.5
2,583,054	+				-0.9
2,583,054	+		Ga0059261_2490	0.50	+0.1
2,583,054	+				+1.1
2,583,055	-		Ga0059261_2490	0.50	-0.2
2,583,055	-		Ga0059261_2490	0.50	-1.0
2,583,055	-		Ga0059261_2490	0.50	+0.5
2,583,055	-				+0.1
2,583,078	+		Ga0059261_2490	0.55	-0.5
2,583,078	+		Ga0059261_2490	0.55	-2.4
2,583,078	+		Ga0059261_2490	0.55	-1.5
2,583,078	+		Ga0059261_2490	0.55	-1.5
2,583,078	+		Ga0059261_2490	0.55	-1.9
2,583,078	+				+0.1
2,583,078	+		Ga0059261_2490	0.55	+0.3
2,583,078	+		Ga0059261_2490	0.55	+1.1
2,583,078	+		Ga0059261_2490	0.55	-2.5
2,583,078	+		Ga0059261_2490	0.55	+1.7
2,583,078	+		Ga0059261_2490	0.55	-0.9
2,583,079	-		Ga0059261_2490	0.55	-0.9
2,583,079	-		Ga0059261_2490	0.55	-1.2
2,583,079	-		Ga0059261_2490	0.55	-1.6
2,583,081	+		Ga0059261_2490	0.55	-0.5
2,583,081	+		Ga0059261_2490	0.55	-1.7
2,583,081	+		Ga0059261_2490	0.55	-1.7
2,583,081	+		Ga0059261_2490	0.55	-0.3
2,583,082	-		Ga0059261_2490	0.56	-0.9
2,583,082	-		Ga0059261_2490	0.56	+0.1
2,583,082	-		Ga0059261_2490	0.56	-1.5
2,583,198	+		Ga0059261_2490	0.80	-1.2
2,583,198	+				+1.1
2,583,198	+		Ga0059261_2490	0.80	+1.1
2,583,198	+		Ga0059261_2490	0.80	+0.5
2,583,199	-		Ga0059261_2490	0.81	-0.7
2,583,199	-		Ga0059261_2490	0.81	-1.5
2,583,199	-		Ga0059261_2490	0.81	-1.5
2,583,199	-				+0.5
2,583,199	-				+0.7
2,583,207	+		Ga0059261_2490	0.82	+0.1
2,583,265	+				-0.7
2,583,265	+				-0.5
2,583,266	-				-2.1
2,583,334	+				+0.8
2,583,334	+				+0.5
2,583,334	+				+1.5
2,583,334	+				+0.9
2,583,334	+				-2.0
2,583,335	-				-0.6
2,583,335	-				+0.1
2,583,365	+				+0.1
2,583,365	+				-0.9
2,583,366	-				+0.5
2,583,366	-				+0.2
2,583,406	+				+0.3
2,583,406	+				-1.2
2,583,406	+				-2.4
2,583,406	+				-1.0
2,583,406	+				+0.1
2,583,406	+				-0.9
2,583,406	+				-1.5
2,583,406	+				-2.2
2,583,406	+				-0.2
2,583,406	+				-1.2
2,583,407	-				+2.1
2,583,407	-				+0.3
2,583,407	-				+0.7
2,583,407	-				+0.8
2,583,407	-				+1.1
2,583,407	-				+0.1
2,583,407	-				-0.6
2,583,407	-				-1.4
2,583,407	-				-0.9
2,583,407	-				+0.0
2,583,407	-				-0.2
2,583,435	+				-0.8
2,583,435	+				-0.7
2,583,436	-				+0.3
2,583,467	+				+0.6
2,583,467	+				-0.9
2,583,467	+				-0.1
2,583,467	+				-1.2
2,583,467	+				+0.5
2,583,467	+				+1.1
2,583,467	+				+0.4
2,583,467	+				+1.1
2,583,467	+				-0.3
2,583,467	+				-0.5
2,583,467	+				+0.1
2,583,467	+				+0.8
2,583,468	-				+0.3
2,583,468	-				+0.1
2,583,468	-				-0.7
2,583,468	-				-0.2
2,583,468	-				-0.1
2,583,468	-				-0.2
2,583,468	-				-0.2
2,583,468	-				-0.8
2,583,468	-				+0.1
2,583,531	+		Ga0059261_2491	0.11	+1.5
2,583,531	+		Ga0059261_2491	0.11	+0.1
2,583,531	+		Ga0059261_2491	0.11	-0.2
2,583,531	+		Ga0059261_2491	0.11	-0.4
2,583,532	-		Ga0059261_2491	0.11	-0.4
2,583,532	-		Ga0059261_2491	0.11	-0.1
2,583,532	-		Ga0059261_2491	0.11	+0.3
2,583,532	-		Ga0059261_2491	0.11	-0.9
2,583,570	+		Ga0059261_2491	0.18	+0.6
2,583,570	+		Ga0059261_2491	0.18	-0.2
2,583,570	+		Ga0059261_2491	0.18	-0.7
2,583,570	+		Ga0059261_2491	0.18	-0.5
2,583,570	+		Ga0059261_2491	0.18	-0.1
2,583,570	+		Ga0059261_2491	0.18	-0.9
2,583,570	+		Ga0059261_2491	0.18	-0.1
2,583,570	+		Ga0059261_2491	0.18	+0.1
2,583,571	-		Ga0059261_2491	0.19	+0.4
2,583,811	-		Ga0059261_2491	0.65	-0.3
2,583,870	+		Ga0059261_2491	0.76	-0.4
2,583,871	-		Ga0059261_2491	0.76	-0.6
2,583,935	+		Ga0059261_2491	0.89	+0.1
2,583,936	-		Ga0059261_2491	0.89	-0.2