Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2458

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,540,683	+		Ga0059261_2457	0.42	+0.1
2,540,683	+		Ga0059261_2457	0.42	+0.5
2,540,683	+		Ga0059261_2457	0.42	-1.2
2,540,683	+		Ga0059261_2457	0.42	-0.3
2,540,684	-		Ga0059261_2457	0.43	+0.3
2,540,684	-		Ga0059261_2457	0.43	-0.2
2,540,684	-		Ga0059261_2457	0.43	+0.2
2,540,737	+		Ga0059261_2457	0.51	+0.1
2,540,737	+		Ga0059261_2457	0.51	+0.1
2,540,737	+		Ga0059261_2457	0.51	-0.2
2,540,738	-		Ga0059261_2457	0.51	+0.9
2,540,738	-		Ga0059261_2457	0.51	+0.3
2,540,738	-		Ga0059261_2457	0.51	+0.5
2,540,738	-		Ga0059261_2457	0.51	+0.2
2,540,848	+		Ga0059261_2457	0.69	+0.9
2,540,848	+		Ga0059261_2457	0.69	+0.2
2,540,848	+		Ga0059261_2457	0.69	+0.1
2,540,848	+		Ga0059261_2457	0.69	-0.3
2,540,849	-		Ga0059261_2457	0.69	+1.0
2,540,849	-		Ga0059261_2457	0.69	-0.2
2,540,849	-		Ga0059261_2457	0.69	-0.8
2,540,849	-		Ga0059261_2457	0.69	-0.1
2,540,849	-		Ga0059261_2457	0.69	-0.3
2,540,849	-		Ga0059261_2457	0.69	+0.1
2,540,849	-		Ga0059261_2457	0.69	-0.1
2,540,849	-		Ga0059261_2457	0.69	+0.3
2,540,858	-		Ga0059261_2457	0.70	+0.4
2,540,983	+				+0.6
2,540,983	+				-0.2
2,540,984	-				+0.1
2,540,984	-				+0.2
2,541,075	+				+1.1
2,541,075	+				-0.2
2,541,075	+				+0.8
2,541,075	+				-0.1
2,541,075	+				-0.1
2,541,086	+				-2.1
2,541,086	+				-0.6
2,541,086	+				-1.6
2,541,086	+				-1.0
2,541,087	-				+0.1
2,541,087	-				-1.2
2,541,087	-				-0.3
2,541,167	+				-0.5
2,541,201	+		Ga0059261_2458	0.14	-1.1
2,541,202	-		Ga0059261_2458	0.14	-1.2
2,541,203	+		Ga0059261_2458	0.14	-0.2
2,541,203	+		Ga0059261_2458	0.14	-1.4
2,541,203	+		Ga0059261_2458	0.14	+0.8
2,541,203	+		Ga0059261_2458	0.14	-0.7
2,541,203	+		Ga0059261_2458	0.14	-0.7
2,541,204	-		Ga0059261_2458	0.14	-0.4
2,541,204	-		Ga0059261_2458	0.14	-0.9
2,541,204	-		Ga0059261_2458	0.14	-2.4
2,541,204	-		Ga0059261_2458	0.14	-1.0
2,541,204	-				-0.5
2,541,223	+		Ga0059261_2458	0.17	-0.7
2,541,223	+		Ga0059261_2458	0.17	-1.2
2,541,224	-		Ga0059261_2458	0.17	+0.0
2,541,224	-		Ga0059261_2458	0.17	-1.7
2,541,457	+		Ga0059261_2458	0.48	-0.6
2,541,458	-		Ga0059261_2458	0.48	-1.0
2,541,458	-		Ga0059261_2458	0.48	+1.5
2,541,459	+		Ga0059261_2458	0.48	-1.2
2,541,460	-		Ga0059261_2458	0.48	-0.5
2,541,460	-		Ga0059261_2458	0.48	-2.0
2,541,460	-		Ga0059261_2458	0.48	-1.6
2,541,460	-		Ga0059261_2458	0.48	-0.5
2,541,460	-		Ga0059261_2458	0.48	-0.1
2,541,520	+		Ga0059261_2458	0.56	-0.7
2,541,520	+		Ga0059261_2458	0.56	-0.5
2,541,586	+		Ga0059261_2458	0.65	-0.1
2,541,586	+		Ga0059261_2458	0.65	+1.7
2,541,586	+		Ga0059261_2458	0.65	-1.3
2,541,586	+				+1.1
2,541,586	+		Ga0059261_2458	0.65	-1.5
2,541,586	+		Ga0059261_2458	0.65	-0.6
2,541,586	+		Ga0059261_2458	0.65	-0.0
2,541,587	-		Ga0059261_2458	0.65	-1.5
2,541,772	+		Ga0059261_2458	0.89	-0.4
2,541,772	+		Ga0059261_2458	0.89	+0.1
2,541,773	-		Ga0059261_2458	0.89	+1.3
2,541,773	-		Ga0059261_2458	0.89	+0.2
2,541,774	+		Ga0059261_2458	0.90	-0.2
2,541,774	+		Ga0059261_2458	0.90	-0.8
2,541,774	+		Ga0059261_2458	0.90	-0.4
2,541,775	-		Ga0059261_2458	0.90	-0.7
2,541,889	-				+0.0
2,541,889	-				+0.2
2,541,894	+				+0.1
2,541,895	-				+0.1
2,541,895	-				+0.6
2,541,896	+				+0.4
2,541,896	+				+0.2
2,541,897	-				+1.1
2,541,897	-				-0.3
2,541,897	-				-1.1
2,542,026	+		Ga0059261_2459	0.12	+0.4
2,542,026	+		Ga0059261_2459	0.12	+0.3
2,542,026	+		Ga0059261_2459	0.12	-0.2
2,542,026	+		Ga0059261_2459	0.12	-0.5
2,542,027	-		Ga0059261_2459	0.12	+0.4
2,542,027	-		Ga0059261_2459	0.12	+0.4
2,542,027	-		Ga0059261_2459	0.12	-0.4
2,542,128	+		Ga0059261_2459	0.21	+0.3
2,542,128	+		Ga0059261_2459	0.21	+0.1
2,542,128	+		Ga0059261_2459	0.21	-0.7
2,542,128	+		Ga0059261_2459	0.21	+0.9
2,542,128	+		Ga0059261_2459	0.21	+0.0
2,542,128	+		Ga0059261_2459	0.21	-1.5
2,542,128	+		Ga0059261_2459	0.21	-1.1
2,542,128	+		Ga0059261_2459	0.21	-0.5
2,542,128	+		Ga0059261_2459	0.21	-0.5
2,542,128	+		Ga0059261_2459	0.21	+0.4
2,542,128	+		Ga0059261_2459	0.21	+1.1
2,542,128	+		Ga0059261_2459	0.21	-0.1
2,542,128	+		Ga0059261_2459	0.21	-0.3
2,542,128	+		Ga0059261_2459	0.21	-0.1
2,542,129	-		Ga0059261_2459	0.21	-0.1
2,542,129	-		Ga0059261_2459	0.21	-0.2
2,542,129	-		Ga0059261_2459	0.21	-0.7
2,542,129	-		Ga0059261_2459	0.21	-0.1
2,542,129	-		Ga0059261_2459	0.21	+0.4
2,542,129	-		Ga0059261_2459	0.21	-0.1
2,542,129	-				-0.5
2,542,129	-		Ga0059261_2459	0.21	-0.1
2,542,241	+		Ga0059261_2459	0.31	+0.0
2,542,242	-		Ga0059261_2459	0.31	+0.0
2,542,242	-		Ga0059261_2459	0.31	-0.7
2,542,263	+		Ga0059261_2459	0.33	+0.7
2,542,263	+		Ga0059261_2459	0.33	-1.0
2,542,263	+		Ga0059261_2459	0.33	-0.7
2,542,263	+		Ga0059261_2459	0.33	-0.4
2,542,263	+		Ga0059261_2459	0.33	-0.2
2,542,263	+		Ga0059261_2459	0.33	-0.8
2,542,263	+		Ga0059261_2459	0.33	+0.7
2,542,263	+		Ga0059261_2459	0.33	-0.0
2,542,263	+		Ga0059261_2459	0.33	-0.0
2,542,264	-		Ga0059261_2459	0.33	+0.0
2,542,264	-		Ga0059261_2459	0.33	+0.2
2,542,264	-		Ga0059261_2459	0.33	+0.0
2,542,264	-		Ga0059261_2459	0.33	-1.5
2,542,264	-		Ga0059261_2459	0.33	-0.5
2,542,264	-		Ga0059261_2459	0.33	+0.4
2,542,728	+		Ga0059261_2459	0.75	-0.0
2,542,728	+		Ga0059261_2459	0.75	+0.1
2,542,729	-		Ga0059261_2459	0.75	+0.4
2,542,729	-		Ga0059261_2459	0.75	-1.2
2,542,729	-		Ga0059261_2459	0.75	-1.4
2,542,729	-		Ga0059261_2459	0.75	-0.0
2,542,745	+		Ga0059261_2459	0.76	-0.1
2,542,745	+		Ga0059261_2459	0.76	-0.9
2,542,745	+		Ga0059261_2459	0.76	+1.0
2,542,745	+		Ga0059261_2459	0.76	+0.3
2,542,745	+		Ga0059261_2459	0.76	-0.1
2,542,745	+		Ga0059261_2459	0.76	-0.7
2,542,745	+		Ga0059261_2459	0.76	-0.5
2,542,745	+		Ga0059261_2459	0.76	-0.2
2,542,745	+		Ga0059261_2459	0.76	-0.1
2,542,745	+		Ga0059261_2459	0.76	+0.3
2,542,746	-		Ga0059261_2459	0.76	-0.7
2,542,746	-		Ga0059261_2459	0.76	-0.3
2,542,746	-		Ga0059261_2459	0.76	-0.5