Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2417

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,508,920	+		Ga0059261_2415	0.56	+0.3
2,508,920	+		Ga0059261_2415	0.56	-0.0
2,508,920	+		Ga0059261_2415	0.56	-0.4
2,508,920	+		Ga0059261_2415	0.56	-0.7
2,508,920	+		Ga0059261_2415	0.56	+0.1
2,508,921	-		Ga0059261_2415	0.57	-0.1
2,508,921	-		Ga0059261_2415	0.57	-0.5
2,508,921	-		Ga0059261_2415	0.57	+0.2
2,508,921	-		Ga0059261_2415	0.57	+0.1
2,508,921	-		Ga0059261_2415	0.57	-0.8
2,508,921	-		Ga0059261_2415	0.57	+0.3
2,508,926	+		Ga0059261_2415	0.57	-0.5
2,508,927	-		Ga0059261_2415	0.57	+0.4
2,508,927	-		Ga0059261_2415	0.57	-0.1
2,509,202	+		Ga0059261_2415	0.86	+0.3
2,509,202	+		Ga0059261_2415	0.86	+0.1
2,509,202	+		Ga0059261_2415	0.86	-0.8
2,509,202	+		Ga0059261_2415	0.86	+1.0
2,509,202	+		Ga0059261_2415	0.86	+1.4
2,509,202	+		Ga0059261_2415	0.86	-0.5
2,509,202	+		Ga0059261_2415	0.86	-1.1
2,509,202	+		Ga0059261_2415	0.86	+0.8
2,509,202	+		Ga0059261_2415	0.86	+0.1
2,509,202	+		Ga0059261_2415	0.86	+0.6
2,509,203	-		Ga0059261_2415	0.87	+0.6
2,509,203	-		Ga0059261_2415	0.87	-0.4
2,509,203	-		Ga0059261_2415	0.87	+0.1
2,509,203	-		Ga0059261_2415	0.87	-0.8
2,509,203	-		Ga0059261_2415	0.87	+0.4
2,509,203	-		Ga0059261_2415	0.87	-0.0
2,509,203	-		Ga0059261_2415	0.87	+1.5
2,509,203	-		Ga0059261_2415	0.87	+0.2
2,509,203	-		Ga0059261_2415	0.87	-0.3
2,509,282	-				-0.2
2,509,282	-				+0.3
2,509,492	+		Ga0059261_2416	0.28	-0.3
2,509,492	+		Ga0059261_2416	0.28	-1.0
2,509,492	+		Ga0059261_2416	0.28	-0.0
2,509,493	-		Ga0059261_2416	0.28	+0.5
2,509,493	-		Ga0059261_2416	0.28	-0.2
2,509,493	-		Ga0059261_2416	0.28	-0.3
2,509,493	-		Ga0059261_2416	0.28	-1.0
2,509,493	-		Ga0059261_2416	0.28	-0.3
2,509,493	-		Ga0059261_2416	0.28	-0.7
2,509,795	+		Ga0059261_2416	0.79	-0.3
2,509,795	+		Ga0059261_2416	0.79	-0.8
2,509,795	+		Ga0059261_2416	0.79	+0.3
2,509,796	-		Ga0059261_2416	0.80	+0.2
2,509,796	-		Ga0059261_2416	0.80	-0.0
2,509,796	-		Ga0059261_2416	0.80	-0.4
2,509,855	+		Ga0059261_2416	0.90	+0.9
2,509,855	+		Ga0059261_2416	0.90	-0.5
2,509,855	+		Ga0059261_2416	0.90	+0.5
2,509,855	+		Ga0059261_2416	0.90	-0.7
2,509,856	-		Ga0059261_2416	0.90	-0.1
2,509,856	-		Ga0059261_2416	0.90	+0.7
2,509,888	+				-0.2
2,509,888	+				+0.1
2,509,888	+				-2.3
2,509,888	+				+0.1
2,509,888	+				+0.1
2,509,888	+				-0.5
2,509,888	+				-2.2
2,509,889	-				+0.3
2,509,889	-				-0.4
2,510,007	+				-1.9
2,510,007	+				-0.5
2,510,008	-				-0.5
2,510,008	-				-1.5
2,510,008	-				-0.5
2,510,008	-				-1.6
2,510,277	+		Ga0059261_2417	0.25	+0.1
2,510,337	+		Ga0059261_2417	0.29	-1.7
2,510,338	-		Ga0059261_2417	0.29	-1.8
2,510,338	-				-0.9
2,510,338	-		Ga0059261_2417	0.29	-2.5
2,510,373	+		Ga0059261_2417	0.31	-0.9
2,510,373	+		Ga0059261_2417	0.31	-1.2
2,510,374	-		Ga0059261_2417	0.31	-0.2
2,510,374	-		Ga0059261_2417	0.31	-1.2
2,510,374	-				+0.1
2,510,398	-				-0.2
2,510,787	+		Ga0059261_2417	0.59	-0.5
2,510,787	+				+1.1
2,510,787	+		Ga0059261_2417	0.59	-0.9
2,510,787	+		Ga0059261_2417	0.59	+0.1
2,510,788	-		Ga0059261_2417	0.59	-0.3
2,510,889	+		Ga0059261_2417	0.66	-0.5
2,510,890	-		Ga0059261_2417	0.66	+0.1
2,510,982	+		Ga0059261_2417	0.72	-2.2
2,510,995	-				+0.1
2,511,038	-		Ga0059261_2417	0.76	-0.6
2,511,498	-				+0.2
2,511,498	-				+0.9
2,511,498	-				-0.1
2,511,498	-				-0.5
2,511,498	-				+0.2
2,511,498	-				+2.1
2,511,498	-				+0.1
2,511,498	-				+0.4
2,511,531	-				-0.9
2,511,531	-		Ga0059261_2418	0.12	+0.5
2,511,602	+				+0.4
2,511,603	-		Ga0059261_2418	0.19	+1.1
2,511,635	+		Ga0059261_2418	0.21	-0.5
2,511,636	-		Ga0059261_2418	0.21	-2.1
2,511,798	-		Ga0059261_2418	0.35	+0.1
2,511,798	-		Ga0059261_2418	0.35	-0.8
2,511,798	-		Ga0059261_2418	0.35	+0.1
2,511,798	-				+0.5
2,511,798	-		Ga0059261_2418	0.35	+0.4
2,511,941	+		Ga0059261_2418	0.47	-0.1
2,511,942	-		Ga0059261_2418	0.47	-1.5
2,511,942	-		Ga0059261_2418	0.47	-0.5
2,511,944	+		Ga0059261_2418	0.48	-0.9
2,511,944	+				+0.4
2,511,945	-				+0.1
2,511,945	-		Ga0059261_2418	0.48	+0.8
2,511,945	-		Ga0059261_2418	0.48	-0.2
2,511,945	-		Ga0059261_2418	0.48	+0.1
2,511,990	-		Ga0059261_2418	0.52	-1.5
2,511,990	-		Ga0059261_2418	0.52	-1.9
2,511,990	-		Ga0059261_2418	0.52	-0.7
2,511,990	-		Ga0059261_2418	0.52	-0.3
2,512,306	-		Ga0059261_2418	0.79	-0.3
2,512,306	-		Ga0059261_2418	0.79	-0.5
2,512,349	+				+1.1