Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2179

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,290,109	+		Ga0059261_2177	0.63	+0.6
2,290,110	-		Ga0059261_2177	0.63	-0.1
2,290,110	-		Ga0059261_2177	0.63	+0.2
2,290,110	-		Ga0059261_2177	0.63	-0.5
2,290,253	+		Ga0059261_2177	0.74	+0.5
2,290,253	+		Ga0059261_2177	0.74	-0.7
2,290,253	+		Ga0059261_2177	0.74	+0.5
2,290,254	-		Ga0059261_2177	0.74	+0.1
2,290,254	-		Ga0059261_2177	0.74	-0.0
2,290,661	+		Ga0059261_2178	0.16	+0.6
2,290,662	+		Ga0059261_2178	0.16	+0.6
2,290,662	+				+1.1
2,290,662	+		Ga0059261_2178	0.16	+0.1
2,290,663	-		Ga0059261_2178	0.16	-0.3
2,290,663	-		Ga0059261_2178	0.16	+0.5
2,290,663	-		Ga0059261_2178	0.16	-0.3
2,290,663	-		Ga0059261_2178	0.16	+0.0
2,290,663	-		Ga0059261_2178	0.16	+0.3
2,290,671	+		Ga0059261_2178	0.19	+0.0
2,290,671	+		Ga0059261_2178	0.19	+0.2
2,290,755	+		Ga0059261_2178	0.45	-0.3
2,290,755	+		Ga0059261_2178	0.45	-0.4
2,290,756	-		Ga0059261_2178	0.45	+0.0
2,290,756	-		Ga0059261_2178	0.45	-0.9
2,290,768	+		Ga0059261_2178	0.49	-1.7
2,290,768	+		Ga0059261_2178	0.49	-0.4
2,290,809	+		Ga0059261_2178	0.61	-0.3
2,290,809	+		Ga0059261_2178	0.61	+0.5
2,290,810	-		Ga0059261_2178	0.62	-0.4
2,290,860	+		Ga0059261_2178	0.77	+1.4
2,290,991	+				-0.3
2,290,992	-				-0.1
2,290,992	-				-0.9
2,290,992	-				+0.6
2,291,004	+				-0.3
2,291,004	+				+0.1
2,291,004	+				-0.1
2,291,004	+				-0.3
2,291,004	+				+0.8
2,291,004	+				-0.3
2,291,004	+				+0.5
2,291,005	-				-0.9
2,291,005	-				-1.3
2,291,005	-				-1.1
2,291,005	-				-1.7
2,291,005	-				-0.5
2,291,005	-				-0.3
2,291,005	-				-0.4
2,291,034	+				-0.3
2,291,035	-				-0.5
2,291,086	+				-1.3
2,291,086	+				-0.1
2,291,236	+		Ga0059261_2179	0.27	-0.9
2,291,236	+		Ga0059261_2179	0.27	-0.5
2,291,236	+		Ga0059261_2179	0.27	-1.9
2,291,236	+		Ga0059261_2179	0.27	+0.1
2,291,236	+		Ga0059261_2179	0.27	-0.8
2,291,236	+		Ga0059261_2179	0.27	+0.4
2,291,236	+		Ga0059261_2179	0.27	-1.0
2,291,236	+		Ga0059261_2179	0.27	-1.2
2,291,237	-		Ga0059261_2179	0.27	+1.1
2,291,237	-		Ga0059261_2179	0.27	-1.5
2,291,237	-		Ga0059261_2179	0.27	-1.2
2,291,237	-		Ga0059261_2179	0.27	-2.1
2,291,255	+		Ga0059261_2179	0.30	-1.7
2,291,272	+		Ga0059261_2179	0.33	-0.5
2,291,272	+		Ga0059261_2179	0.33	-1.3
2,291,318	+		Ga0059261_2179	0.40	-0.5
2,291,318	+		Ga0059261_2179	0.40	-1.1
2,291,318	+		Ga0059261_2179	0.40	-0.2
2,291,319	-				+1.1
2,291,319	-				-0.2
2,291,319	-		Ga0059261_2179	0.41	-0.7
2,291,319	-		Ga0059261_2179	0.41	-0.4
2,291,320	+		Ga0059261_2179	0.41	-2.1
2,291,321	-		Ga0059261_2179	0.41	-0.9
2,291,354	+				+0.1
2,291,354	+		Ga0059261_2179	0.46	-0.5
2,291,354	+		Ga0059261_2179	0.46	-0.1
2,291,354	+		Ga0059261_2179	0.46	-1.9
2,291,355	-		Ga0059261_2179	0.46	-2.1
2,291,456	+		Ga0059261_2179	0.62	-1.5
2,291,456	+		Ga0059261_2179	0.62	+0.8
2,291,456	+		Ga0059261_2179	0.62	-1.5
2,291,457	-		Ga0059261_2179	0.63	+0.0
2,291,457	-		Ga0059261_2179	0.63	-2.6
2,291,457	-		Ga0059261_2179	0.63	+0.1
2,291,561	+		Ga0059261_2179	0.79	-0.5
2,291,561	+		Ga0059261_2179	0.79	-2.0
2,291,561	+		Ga0059261_2179	0.79	+0.4
2,291,562	-		Ga0059261_2179	0.79	-1.7
2,291,562	-		Ga0059261_2179	0.79	-0.6
2,291,562	-		Ga0059261_2179	0.79	-0.6
2,291,562	-		Ga0059261_2179	0.79	-1.5
2,291,562	-		Ga0059261_2179	0.79	-0.9
2,291,562	-		Ga0059261_2179	0.79	-0.9
2,291,778	+		Ga0059261_2180	0.14	+1.0
2,291,778	+		Ga0059261_2180	0.14	+1.1
2,291,778	+		Ga0059261_2180	0.14	-0.6
2,291,778	+		Ga0059261_2180	0.14	+0.6
2,291,778	+		Ga0059261_2180	0.14	-1.5
2,291,779	-		Ga0059261_2180	0.14	-0.6
2,291,779	-		Ga0059261_2180	0.14	-0.6
2,291,779	-		Ga0059261_2180	0.14	+0.1
2,291,779	-		Ga0059261_2180	0.14	+0.4
2,291,779	-		Ga0059261_2180	0.14	-0.9
2,291,779	-		Ga0059261_2180	0.14	+0.3
2,291,779	-		Ga0059261_2180	0.14	-0.2
2,291,853	+		Ga0059261_2180	0.32	+0.9
2,291,853	+		Ga0059261_2180	0.32	-0.6
2,291,853	+		Ga0059261_2180	0.32	-0.4
2,291,853	+				+1.1
2,291,853	+		Ga0059261_2180	0.32	-0.7
2,291,853	+		Ga0059261_2180	0.32	-0.3
2,291,854	-		Ga0059261_2180	0.32	+0.2
2,291,854	-		Ga0059261_2180	0.32	-0.2
2,291,854	-		Ga0059261_2180	0.32	-2.3
2,291,854	-		Ga0059261_2180	0.32	-0.1
2,291,854	-		Ga0059261_2180	0.32	-0.2
2,291,854	-		Ga0059261_2180	0.32	-0.7
2,291,854	-		Ga0059261_2180	0.32	-0.2
2,291,854	-		Ga0059261_2180	0.32	-0.1
2,291,901	+		Ga0059261_2180	0.44	+0.4
2,291,901	+		Ga0059261_2180	0.44	-0.4
2,291,901	+		Ga0059261_2180	0.44	+1.7
2,291,901	+		Ga0059261_2180	0.44	-0.3
2,291,902	-		Ga0059261_2180	0.44	-0.3
2,291,902	-		Ga0059261_2180	0.44	+0.6
2,291,902	-		Ga0059261_2180	0.44	+0.9
2,292,072	+		Ga0059261_2180	0.85	+0.9
2,292,187	+				-3.4
2,292,320	+				-1.7
2,292,321	-				-1.0
2,292,321	-				+0.0
2,292,321	-				+0.5
2,292,434	+		Ga0059261_2181	0.11	-1.0
2,292,434	+		Ga0059261_2181	0.11	-2.0
2,292,434	+		Ga0059261_2181	0.11	+0.1
2,292,434	+		Ga0059261_2181	0.11	+0.7
2,292,434	+		Ga0059261_2181	0.11	-0.7
2,292,434	+		Ga0059261_2181	0.11	-3.7
2,292,435	-		Ga0059261_2181	0.11	-2.5
2,292,435	-		Ga0059261_2181	0.11	-0.8
2,292,453	-		Ga0059261_2181	0.12	-1.2
2,292,653	+		Ga0059261_2181	0.21	-1.1
2,292,653	+		Ga0059261_2181	0.21	+0.0
2,292,653	+		Ga0059261_2181	0.21	+0.0
2,292,653	+		Ga0059261_2181	0.21	-0.5
2,292,653	+		Ga0059261_2181	0.21	-1.4
2,292,653	+		Ga0059261_2181	0.21	-0.5
2,292,653	+		Ga0059261_2181	0.21	-3.4
2,292,653	+		Ga0059261_2181	0.21	+0.1
2,292,653	+		Ga0059261_2181	0.21	-0.5
2,292,653	+		Ga0059261_2181	0.21	+0.1
2,292,653	+		Ga0059261_2181	0.21	-0.3
2,292,653	+		Ga0059261_2181	0.21	-1.8
2,292,653	+		Ga0059261_2181	0.21	-2.2
2,292,653	+		Ga0059261_2181	0.21	+0.1
2,292,653	+		Ga0059261_2181	0.21	-0.1
2,292,653	+		Ga0059261_2181	0.21	-0.5
2,292,654	-		Ga0059261_2181	0.21	-0.8
2,292,654	-		Ga0059261_2181	0.21	-1.1
2,292,654	-		Ga0059261_2181	0.21	-0.0
2,292,654	-		Ga0059261_2181	0.21	-0.6
2,292,654	-		Ga0059261_2181	0.21	+0.4
2,292,654	-				-0.5
2,292,654	-		Ga0059261_2181	0.21	-0.9
2,292,654	-		Ga0059261_2181	0.21	-2.1