Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2145

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,257,259	-		Ga0059261_2143	0.72	+0.2
2,257,259	-		Ga0059261_2143	0.72	+0.3
2,257,270	+		Ga0059261_2143	0.74	+0.1
2,257,271	-		Ga0059261_2143	0.74	-0.2
2,257,271	-		Ga0059261_2143	0.74	-0.5
2,257,271	-		Ga0059261_2143	0.74	-0.4
2,257,271	-		Ga0059261_2143	0.74	-0.3
2,257,271	-		Ga0059261_2143	0.74	+0.5
2,257,271	-		Ga0059261_2143	0.74	+0.8
2,257,430	+				-0.1
2,257,430	+				+0.4
2,257,430	+				-0.0
2,257,430	+				+1.6
2,257,431	-				+0.3
2,257,431	-				-0.2
2,257,431	-				+0.1
2,257,463	+				-0.7
2,257,463	+				-0.3
2,257,463	+				+0.3
2,257,463	+				-0.0
2,257,463	+				-0.2
2,257,463	+				+0.1
2,257,463	+				+0.4
2,257,463	+				-0.2
2,257,464	-				-0.5
2,257,464	-				+0.4
2,257,464	-				-0.5
2,257,464	-				-0.4
2,257,464	-				+0.6
2,257,464	-				+1.3
2,257,464	-				-0.2
2,257,548	+				-0.2
2,257,548	+				+0.4
2,257,549	-				+0.5
2,257,549	-				+0.1
2,257,549	-				+0.4
2,257,549	-				+0.5
2,257,549	-				-0.2
2,257,740	+		Ga0059261_2144	0.42	+0.4
2,257,740	+		Ga0059261_2144	0.42	+0.1
2,257,740	+		Ga0059261_2144	0.42	+0.5
2,257,740	+		Ga0059261_2144	0.42	-0.0
2,257,740	+		Ga0059261_2144	0.42	-0.3
2,257,741	-		Ga0059261_2144	0.42	+0.3
2,257,741	-		Ga0059261_2144	0.42	+0.4
2,257,741	-		Ga0059261_2144	0.42	-0.7
2,258,004	+		Ga0059261_2144	0.87	-1.4
2,258,004	+		Ga0059261_2144	0.87	+0.2
2,258,004	+		Ga0059261_2144	0.87	-0.1
2,258,005	-		Ga0059261_2144	0.87	-1.0
2,258,005	-		Ga0059261_2144	0.87	-0.1
2,258,005	-		Ga0059261_2144	0.87	+0.0
2,258,058	+				+0.2
2,258,058	+				+0.6
2,258,058	+				-0.3
2,258,058	+				+0.5
2,258,058	+				-0.1
2,258,059	-				-0.6
2,258,059	-				+0.5
2,258,061	+				-1.0
2,258,061	+				-0.3
2,258,061	+				-0.1
2,258,061	+				-0.5
2,258,061	+				-0.2
2,258,061	+				-0.3
2,258,062	-				+0.3
2,258,062	-				+2.7
2,258,062	-				+0.4
2,258,062	-				-0.0
2,258,063	-				+0.8
2,258,067	+				+0.4
2,258,067	+				+0.5
2,258,067	+				+0.6
2,258,067	+				+0.4
2,258,067	+				-0.6
2,258,067	+				+0.3
2,258,067	+				-0.1
2,258,068	-				+0.8
2,258,068	-				-0.2
2,258,068	-				+0.7
2,258,108	+				-0.3
2,258,108	+				-0.3
2,258,108	+				+0.5
2,258,108	+				-0.4
2,258,109	-				-0.1
2,258,278	+		Ga0059261_2145	0.28	-0.3
2,258,278	+		Ga0059261_2145	0.28	-1.7
2,258,278	+		Ga0059261_2145	0.28	+0.3
2,258,279	-		Ga0059261_2145	0.28	-1.6
2,258,317	+		Ga0059261_2145	0.38	+1.4
2,258,317	+		Ga0059261_2145	0.38	+0.1
2,258,317	+		Ga0059261_2145	0.38	+0.5
2,258,317	+		Ga0059261_2145	0.38	+0.1
2,258,318	-		Ga0059261_2145	0.38	-2.3
2,258,390	+		Ga0059261_2145	0.56	-1.9
2,258,390	+		Ga0059261_2145	0.56	-0.4
2,258,390	+				+0.5
2,258,390	+		Ga0059261_2145	0.56	-3.4
2,258,391	-		Ga0059261_2145	0.56	-0.5
2,258,391	-		Ga0059261_2145	0.56	+0.4
2,258,391	-		Ga0059261_2145	0.56	-0.5
2,258,438	+		Ga0059261_2145	0.68	-1.0
2,258,439	-		Ga0059261_2145	0.68	-1.0
2,258,439	-		Ga0059261_2145	0.68	-0.6
2,258,439	-		Ga0059261_2145	0.68	-0.5
2,258,439	-		Ga0059261_2145	0.68	-1.9
2,258,439	-		Ga0059261_2145	0.68	-1.2
2,258,463	+		Ga0059261_2145	0.74	+2.7
2,258,463	+		Ga0059261_2145	0.74	-0.5
2,258,464	-		Ga0059261_2145	0.74	-1.2
2,258,464	-		Ga0059261_2145	0.74	-0.5
2,258,520	+		Ga0059261_2145	0.88	+0.4
2,258,520	+		Ga0059261_2145	0.88	+1.1
2,258,520	+				+0.1
2,258,523	+		Ga0059261_2145	0.89	-0.5
2,258,585	+				-1.1
2,258,585	+				-1.9
2,258,586	-				+0.1
2,258,586	-				+0.6
2,258,630	+		Ga0059261_2146	0.20	-1.3
2,258,630	+		Ga0059261_2146	0.20	+2.7
2,258,630	+		Ga0059261_2146	0.20	-1.5
2,258,630	+		Ga0059261_2146	0.20	+0.3
2,258,631	-		Ga0059261_2146	0.20	-0.0
2,258,705	+		Ga0059261_2146	0.40	-0.2
2,258,705	+				-0.9
2,258,705	+		Ga0059261_2146	0.40	-1.8
2,258,706	-		Ga0059261_2146	0.40	-0.9
2,258,706	-		Ga0059261_2146	0.40	+0.5
2,258,706	-		Ga0059261_2146	0.40	-1.7
2,258,706	-		Ga0059261_2146	0.40	+0.5
2,258,706	-		Ga0059261_2146	0.40	-0.0
2,258,762	+		Ga0059261_2146	0.55	-1.1
2,258,762	+		Ga0059261_2146	0.55	+0.6
2,258,762	+				+1.1
2,258,763	-		Ga0059261_2146	0.55	-0.2
2,258,763	-		Ga0059261_2146	0.55	+0.5
2,258,763	-		Ga0059261_2146	0.55	-0.1
2,258,763	-		Ga0059261_2146	0.55	+2.1
2,258,810	+		Ga0059261_2146	0.67	-0.4
2,258,810	+		Ga0059261_2146	0.67	-1.2
2,258,810	+		Ga0059261_2146	0.67	-0.1
2,258,810	+		Ga0059261_2146	0.67	-1.2
2,258,810	+		Ga0059261_2146	0.67	-1.7
2,258,811	-		Ga0059261_2146	0.67	+0.1
2,258,811	-				+0.1
2,258,811	-		Ga0059261_2146	0.67	-0.7
2,258,811	-		Ga0059261_2146	0.67	-0.4
2,258,811	-		Ga0059261_2146	0.67	+1.1
2,258,811	-		Ga0059261_2146	0.67	+1.5
2,258,811	-		Ga0059261_2146	0.67	-0.1
2,258,811	-		Ga0059261_2146	0.67	+1.1
2,258,873	+		Ga0059261_2146	0.84	+0.7
2,258,873	+		Ga0059261_2146	0.84	-0.7
2,258,874	-		Ga0059261_2146	0.84	-0.1
2,258,874	-		Ga0059261_2146	0.84	-0.0
2,258,874	-		Ga0059261_2146	0.84	+0.1
2,258,951	+				-0.4
2,258,952	-				-0.7
2,258,952	-				+0.5
2,258,952	-				+0.1
2,258,952	-				-0.1
2,258,952	-				-0.5
2,258,952	-				+0.3
2,258,952	-				-0.7