Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2034

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,135,140	+		Ga0059261_2032	0.33	+0.6
2,135,140	+		Ga0059261_2032	0.33	-0.3
2,135,140	+		Ga0059261_2032	0.33	-0.7
2,135,140	+		Ga0059261_2032	0.33	+0.7
2,135,140	+		Ga0059261_2032	0.33	+0.1
2,135,140	+		Ga0059261_2032	0.33	+0.3
2,135,140	+		Ga0059261_2032	0.33	-0.5
2,135,140	+		Ga0059261_2032	0.33	-0.1
2,135,141	-		Ga0059261_2032	0.34	-0.7
2,135,141	-				+1.1
2,135,141	-		Ga0059261_2032	0.34	-0.7
2,135,141	-		Ga0059261_2032	0.34	+0.6
2,135,141	-		Ga0059261_2032	0.34	-0.0
2,135,141	-		Ga0059261_2032	0.34	+0.4
2,135,141	-		Ga0059261_2032	0.34	+0.6
2,135,141	-		Ga0059261_2032	0.34	+0.1
2,135,141	-		Ga0059261_2032	0.34	-0.2
2,135,141	-		Ga0059261_2032	0.34	-0.4
2,135,141	-		Ga0059261_2032	0.34	+1.3
2,135,188	+		Ga0059261_2032	0.40	-0.5
2,135,188	+		Ga0059261_2032	0.40	+0.3
2,135,188	+		Ga0059261_2032	0.40	-1.1
2,135,188	+		Ga0059261_2032	0.40	+0.1
2,135,189	-		Ga0059261_2032	0.40	-0.2
2,135,189	-		Ga0059261_2032	0.40	+1.0
2,135,189	-		Ga0059261_2032	0.40	-0.7
2,135,189	-		Ga0059261_2032	0.40	+0.5
2,135,189	-		Ga0059261_2032	0.40	+0.7
2,135,189	-		Ga0059261_2032	0.40	+0.3
2,135,189	-		Ga0059261_2032	0.40	-2.3
2,135,245	+		Ga0059261_2032	0.48	+0.0
2,135,246	-		Ga0059261_2032	0.48	-0.9
2,135,275	+		Ga0059261_2032	0.52	+1.1
2,135,275	+		Ga0059261_2032	0.52	-0.1
2,135,275	+		Ga0059261_2032	0.52	-0.5
2,135,275	+		Ga0059261_2032	0.52	+0.1
2,135,275	+		Ga0059261_2032	0.52	+0.2
2,135,275	+		Ga0059261_2032	0.52	-0.1
2,135,275	+		Ga0059261_2032	0.52	+0.0
2,135,276	-		Ga0059261_2032	0.52	+0.2
2,135,276	-		Ga0059261_2032	0.52	+0.5
2,135,276	-		Ga0059261_2032	0.52	-0.7
2,135,276	-		Ga0059261_2032	0.52	-1.7
2,135,276	-		Ga0059261_2032	0.52	+0.0
2,135,670	+				-0.0
2,135,671	-				+0.1
2,135,671	-				+0.0
2,135,671	-				+0.4
2,135,671	-				-0.5
2,136,096	+				-0.1
2,136,096	+				+0.5
2,136,096	+				-0.1
2,136,096	+				-1.1
2,136,096	+				-0.4
2,136,096	+				-0.1
2,136,096	+				-0.2
2,136,096	+				-1.0
2,136,096	+				-0.5
2,136,096	+				+0.9
2,136,096	+				-0.0
2,136,096	+				-1.8
2,136,096	+				+0.1
2,136,096	+				+1.1
2,136,097	-				-0.2
2,136,097	-				-0.3
2,136,097	-				-0.0
2,136,097	-				-0.2
2,136,298	+		Ga0059261_2034	0.25	+0.5
2,136,299	-		Ga0059261_2034	0.26	-0.7
2,136,514	+		Ga0059261_2034	0.53	-0.8
2,136,514	+		Ga0059261_2034	0.53	-1.5
2,136,514	+				+0.1
2,136,514	+		Ga0059261_2034	0.53	-1.6
2,136,514	+		Ga0059261_2034	0.53	+2.7
2,136,514	+		Ga0059261_2034	0.53	-0.9
2,136,514	+		Ga0059261_2034	0.53	-0.6
2,136,514	+		Ga0059261_2034	0.53	-0.8
2,136,515	-		Ga0059261_2034	0.53	+0.1
2,136,515	-		Ga0059261_2034	0.53	+0.5
2,136,515	-		Ga0059261_2034	0.53	+0.4
2,136,515	-		Ga0059261_2034	0.53	-0.1
2,136,515	-		Ga0059261_2034	0.53	+0.3
2,136,515	-		Ga0059261_2034	0.53	-1.0
2,136,515	-		Ga0059261_2034	0.53	+0.0
2,136,515	-		Ga0059261_2034	0.53	+0.2
2,136,515	-		Ga0059261_2034	0.53	+0.1
2,136,515	-		Ga0059261_2034	0.53	+0.1
2,136,515	-		Ga0059261_2034	0.53	-0.5
2,136,515	-		Ga0059261_2034	0.53	-0.1
2,136,516	+		Ga0059261_2034	0.53	-0.9
2,136,516	+		Ga0059261_2034	0.53	-0.6
2,136,516	+		Ga0059261_2034	0.53	+0.1
2,136,517	-		Ga0059261_2034	0.53	-0.2
2,136,517	-		Ga0059261_2034	0.53	+0.4
2,136,676	+		Ga0059261_2034	0.74	+0.8
2,136,676	+				+0.1
2,136,676	+		Ga0059261_2034	0.74	+0.4
2,136,676	+		Ga0059261_2034	0.74	-0.8
2,136,677	-		Ga0059261_2034	0.74	-1.3
2,136,677	-		Ga0059261_2034	0.74	-0.1
2,136,682	-		Ga0059261_2034	0.75	-0.6
2,136,683	+		Ga0059261_2034	0.75	-1.1
2,136,685	+		Ga0059261_2034	0.75	+0.3
2,136,685	+		Ga0059261_2034	0.75	+0.0
2,136,686	-		Ga0059261_2034	0.75	-1.2
2,136,690	+		Ga0059261_2034	0.76	-0.9
2,136,703	+		Ga0059261_2034	0.77	+0.1
2,136,703	+		Ga0059261_2034	0.77	-0.6
2,136,703	+		Ga0059261_2034	0.77	-0.5
2,136,703	+		Ga0059261_2034	0.77	-0.0
2,136,703	+		Ga0059261_2034	0.77	+0.6
2,136,703	+				+2.1
2,136,703	+		Ga0059261_2034	0.77	-0.9
2,136,703	+		Ga0059261_2034	0.77	-0.1
2,136,704	-				+0.5
2,136,704	-		Ga0059261_2034	0.77	-0.3
2,136,704	-		Ga0059261_2034	0.77	-0.7
2,136,704	-		Ga0059261_2034	0.77	+0.1
2,136,704	-		Ga0059261_2034	0.77	-1.2
2,136,736	+		Ga0059261_2034	0.82	-0.7
2,136,736	+		Ga0059261_2034	0.82	-2.6
2,136,737	-		Ga0059261_2034	0.82	-1.0
2,136,763	+		Ga0059261_2034	0.85	-0.9
2,136,763	+		Ga0059261_2034	0.85	-0.1
2,136,763	+		Ga0059261_2034	0.85	+0.1
2,136,763	+		Ga0059261_2034	0.85	-0.2
2,136,764	-		Ga0059261_2034	0.85	+0.1
2,136,764	-		Ga0059261_2034	0.85	-0.7
2,136,764	-		Ga0059261_2034	0.85	-1.0
2,136,764	-		Ga0059261_2034	0.85	-0.4
2,136,764	-		Ga0059261_2034	0.85	-0.5
2,136,764	-		Ga0059261_2034	0.85	-0.6
2,136,838	+				-0.2
2,136,838	+				-0.5
2,136,839	-				+0.4
2,136,839	-				-1.5
2,136,839	-				-0.1
2,136,839	-				-0.5
2,136,839	-				+0.1
2,136,839	-				+0.3
2,136,839	-				+0.2
2,136,918	+				-0.1
2,136,919	-				-0.1
2,136,986	-				+0.3
2,137,301	+		Ga0059261_2035	0.43	+1.1
2,137,302	-		Ga0059261_2035	0.43	-1.2
2,137,395	+		Ga0059261_2035	0.55	-0.8
2,137,395	+		Ga0059261_2035	0.55	+1.5
2,137,395	+		Ga0059261_2035	0.55	-0.6
2,137,395	+		Ga0059261_2035	0.55	-0.3
2,137,396	-		Ga0059261_2035	0.55	-1.0
2,137,396	-		Ga0059261_2035	0.55	+0.4
2,137,396	-		Ga0059261_2035	0.55	-0.3
2,137,396	-		Ga0059261_2035	0.55	-0.2
2,137,396	-		Ga0059261_2035	0.55	-0.6
2,137,522	+		Ga0059261_2035	0.71	+0.8
2,137,522	+		Ga0059261_2035	0.71	-0.3
2,137,523	-		Ga0059261_2035	0.71	+0.2
2,137,523	-		Ga0059261_2035	0.71	+0.3
2,137,523	-		Ga0059261_2035	0.71	-0.2
2,137,524	+		Ga0059261_2035	0.71	-0.8
2,137,524	+		Ga0059261_2035	0.71	-0.1
2,137,524	+		Ga0059261_2035	0.71	-0.1
2,137,524	+		Ga0059261_2035	0.71	+0.5
2,137,524	+		Ga0059261_2035	0.71	-1.5
2,137,525	-		Ga0059261_2035	0.71	-0.5
2,137,525	-		Ga0059261_2035	0.71	-0.4
2,137,525	-		Ga0059261_2035	0.71	+2.1
2,137,525	-		Ga0059261_2035	0.71	-0.8
2,137,525	-				-0.5
2,137,525	-		Ga0059261_2035	0.71	+0.4
2,137,528	+		Ga0059261_2035	0.72	-0.2
2,137,529	-		Ga0059261_2035	0.72	-0.5
2,137,529	-		Ga0059261_2035	0.72	+0.2
2,137,529	-		Ga0059261_2035	0.72	+0.1
2,137,529	-		Ga0059261_2035	0.72	+0.3
2,137,747	+				-0.5
2,137,747	+				-0.6
2,137,747	+				-1.2
2,137,747	+				-0.7
2,137,747	+				-0.3
2,137,747	+				-0.4
2,137,747	+				-0.4
2,137,747	+				+0.3
2,137,748	-				+0.1
2,137,748	-				+0.2
2,137,748	-				-0.4
2,137,748	-				-0.2
2,137,748	-				+0.9
2,137,748	-				+0.9
2,137,814	+				-0.5
2,137,814	+				+0.1
2,137,815	-				-0.4
2,137,815	-				-0.2
2,137,815	-				+0.1