Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2021

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,118,203	+		Ga0059261_2020	0.17	+0.4
2,118,203	+		Ga0059261_2020	0.17	-0.6
2,118,203	+		Ga0059261_2020	0.17	-0.2
2,118,203	+		Ga0059261_2020	0.17	-0.1
2,118,203	+		Ga0059261_2020	0.17	-0.6
2,118,204	-		Ga0059261_2020	0.17	-0.3
2,118,204	-		Ga0059261_2020	0.17	-0.0
2,118,204	-		Ga0059261_2020	0.17	+0.4
2,118,422	+		Ga0059261_2020	0.35	+0.6
2,118,428	+		Ga0059261_2020	0.36	+0.1
2,118,428	+		Ga0059261_2020	0.36	-0.0
2,118,428	+		Ga0059261_2020	0.36	-0.0
2,118,428	+		Ga0059261_2020	0.36	+0.0
2,118,429	-		Ga0059261_2020	0.36	+0.6
2,118,429	-		Ga0059261_2020	0.36	+1.1
2,118,429	-		Ga0059261_2020	0.36	+1.3
2,118,429	-		Ga0059261_2020	0.36	-0.1
2,118,429	-		Ga0059261_2020	0.36	+0.3
2,118,437	+		Ga0059261_2020	0.37	+0.6
2,118,437	+		Ga0059261_2020	0.37	-0.2
2,118,437	+		Ga0059261_2020	0.37	+0.0
2,118,438	-		Ga0059261_2020	0.37	-0.1
2,118,438	-		Ga0059261_2020	0.37	+0.4
2,118,438	-		Ga0059261_2020	0.37	-1.0
2,118,461	+		Ga0059261_2020	0.39	-0.0
2,118,461	+		Ga0059261_2020	0.39	-0.1
2,118,797	-		Ga0059261_2020	0.67	-0.2
2,118,818	+		Ga0059261_2020	0.69	-0.0
2,118,819	-		Ga0059261_2020	0.69	+0.3
2,118,819	-		Ga0059261_2020	0.69	+0.5
2,118,819	-		Ga0059261_2020	0.69	+0.1
2,118,819	-		Ga0059261_2020	0.69	+0.1
2,118,992	+		Ga0059261_2020	0.83	+0.1
2,118,993	-				+1.1
2,118,993	-		Ga0059261_2020	0.83	-0.1
2,118,993	-		Ga0059261_2020	0.83	-0.5
2,119,136	+				-0.9
2,119,136	+				-0.5
2,119,137	-				-0.1
2,119,190	+				-0.1
2,119,190	+				+0.3
2,119,191	-				-1.2
2,119,191	-				+0.5
2,119,216	-				-0.9
2,119,216	-				-0.9
2,119,263	+				-0.3
2,119,264	-				-0.3
2,119,290	+				-0.9
2,119,290	+				+0.4
2,119,290	+				+0.1
2,119,290	+				-1.1
2,119,291	-				+1.1
2,119,291	-				-2.2
2,119,291	-				+0.2
2,119,438	+		Ga0059261_2021	0.17	-0.9
2,119,438	+		Ga0059261_2021	0.17	-0.1
2,119,438	+		Ga0059261_2021	0.17	-1.8
2,119,438	+		Ga0059261_2021	0.17	-1.7
2,119,438	+		Ga0059261_2021	0.17	+0.9
2,119,438	+		Ga0059261_2021	0.17	+0.1
2,119,439	-		Ga0059261_2021	0.17	-1.3
2,119,439	-		Ga0059261_2021	0.17	-0.3
2,119,439	-		Ga0059261_2021	0.17	+0.5
2,119,440	+		Ga0059261_2021	0.17	-0.6
2,119,440	+		Ga0059261_2021	0.17	+0.5
2,119,440	+		Ga0059261_2021	0.17	-1.2
2,119,440	+		Ga0059261_2021	0.17	-0.9
2,119,440	+		Ga0059261_2021	0.17	-0.9
2,119,440	+		Ga0059261_2021	0.17	-2.2
2,119,440	+		Ga0059261_2021	0.17	-1.5
2,119,441	-		Ga0059261_2021	0.17	-1.3
2,119,441	-		Ga0059261_2021	0.17	-1.6
2,119,441	-		Ga0059261_2021	0.17	+1.1
2,119,441	-		Ga0059261_2021	0.17	-1.0
2,119,441	-		Ga0059261_2021	0.17	+0.1
2,119,441	-		Ga0059261_2021	0.17	-1.5
2,119,441	-		Ga0059261_2021	0.17	-1.0
2,119,441	-		Ga0059261_2021	0.17	+1.3
2,119,441	-		Ga0059261_2021	0.17	-0.9
2,119,473	+		Ga0059261_2021	0.19	-1.6
2,119,474	-		Ga0059261_2021	0.19	-1.3
2,119,474	-		Ga0059261_2021	0.19	-0.5
2,119,494	+		Ga0059261_2021	0.21	-0.2
2,119,494	+		Ga0059261_2021	0.21	-0.8
2,119,494	+		Ga0059261_2021	0.21	-0.4
2,119,494	+		Ga0059261_2021	0.21	-1.2
2,119,495	-		Ga0059261_2021	0.21	-0.6
2,119,500	+		Ga0059261_2021	0.21	-2.5
2,119,500	+		Ga0059261_2021	0.21	-0.8
2,119,500	+		Ga0059261_2021	0.21	-1.1
2,119,500	+		Ga0059261_2021	0.21	-0.5
2,119,500	+		Ga0059261_2021	0.21	-0.9
2,119,500	+		Ga0059261_2021	0.21	-0.2
2,119,500	+		Ga0059261_2021	0.21	-2.1
2,119,500	+		Ga0059261_2021	0.21	-1.0
2,119,500	+		Ga0059261_2021	0.21	-1.4
2,119,500	+		Ga0059261_2021	0.21	-1.2
2,119,501	-		Ga0059261_2021	0.21	+0.7
2,119,501	-		Ga0059261_2021	0.21	+1.4
2,119,501	-				-1.9
2,119,501	-		Ga0059261_2021	0.21	-0.2
2,119,698	+		Ga0059261_2021	0.35	+1.7
2,119,698	+		Ga0059261_2021	0.35	-1.3
2,119,699	-		Ga0059261_2021	0.35	-0.7
2,119,707	+				-0.9
2,119,708	-		Ga0059261_2021	0.36	-0.5
2,119,708	-		Ga0059261_2021	0.36	-1.2
2,119,953	+		Ga0059261_2021	0.53	-0.7
2,119,953	+		Ga0059261_2021	0.53	-1.1
2,119,954	-		Ga0059261_2021	0.53	-1.3
2,119,954	-		Ga0059261_2021	0.53	-1.1
2,119,991	-		Ga0059261_2021	0.56	-1.1
2,120,010	+		Ga0059261_2021	0.57	+1.1
2,120,010	+		Ga0059261_2021	0.57	-0.5
2,120,010	+		Ga0059261_2021	0.57	-0.1
2,120,010	+		Ga0059261_2021	0.57	+0.7
2,120,011	-		Ga0059261_2021	0.57	-1.2
2,120,100	+		Ga0059261_2021	0.63	-0.0
2,120,101	-		Ga0059261_2021	0.64	-0.5
2,120,101	-		Ga0059261_2021	0.64	-1.0
2,120,101	-		Ga0059261_2021	0.64	+0.0
2,120,101	-				-0.9
2,120,217	+		Ga0059261_2021	0.72	-0.5
2,120,217	+		Ga0059261_2021	0.72	-1.7
2,120,217	+		Ga0059261_2021	0.72	-0.2
2,120,218	-		Ga0059261_2021	0.72	+1.0
2,120,269	+		Ga0059261_2021	0.75	-0.3
2,120,269	+		Ga0059261_2021	0.75	+0.1
2,120,269	+		Ga0059261_2021	0.75	+1.1
2,120,270	-		Ga0059261_2021	0.75	-0.6
2,120,270	-		Ga0059261_2021	0.75	-2.3
2,120,270	-		Ga0059261_2021	0.75	-0.8
2,120,270	-		Ga0059261_2021	0.75	-1.0
2,120,270	-		Ga0059261_2021	0.75	-0.1
2,120,270	-		Ga0059261_2021	0.75	-1.2
2,120,270	-		Ga0059261_2021	0.75	-2.1
2,120,271	+		Ga0059261_2021	0.76	-1.0
2,120,271	+				-0.5
2,120,271	+		Ga0059261_2021	0.76	-1.1
2,120,271	+		Ga0059261_2021	0.76	-0.2
2,120,271	+		Ga0059261_2021	0.76	+0.1
2,120,271	+		Ga0059261_2021	0.76	-0.5
2,120,272	-		Ga0059261_2021	0.76	-0.4
2,120,272	-		Ga0059261_2021	0.76	+0.4
2,120,376	+		Ga0059261_2021	0.83	-1.0
2,120,376	+		Ga0059261_2021	0.83	+0.3
2,120,377	-		Ga0059261_2021	0.83	-1.1
2,120,377	-		Ga0059261_2021	0.83	+0.1
2,120,377	-		Ga0059261_2021	0.83	-0.5
2,120,377	-		Ga0059261_2021	0.83	-1.6
2,120,471	+		Ga0059261_2021	0.90	-1.6
2,120,508	+				-0.5
2,120,508	+				-1.7
2,120,508	+				+0.3
2,120,509	-				-0.3
2,120,509	-				+0.3
2,120,509	-				+0.7
2,120,602	+				-1.3
2,120,603	-				-0.4
2,120,628	+				-0.9
2,120,628	+				+0.5
2,120,629	-				-0.2
2,120,629	-				-0.2
2,120,629	-				+0.1
2,120,629	-				+0.5
2,120,629	-				+0.1
2,120,629	-				-0.3
2,120,629	-				-0.2
2,120,629	-				+0.4
2,120,671	+				-0.5
2,120,671	+				+0.4
2,120,671	+				+0.5
2,120,672	-				+0.5
2,120,672	-				+0.1
2,120,695	-				-0.2
2,120,695	-				-0.6
2,120,791	+				-0.1
2,120,791	+				+0.0
2,120,791	+				+0.7
2,120,792	-				-1.6
2,120,792	-				-1.7
2,120,792	-				+0.1
2,120,792	-				-0.1
2,120,792	-				-0.4
2,120,792	-				+0.0
2,120,920	+		Ga0059261_2022	0.15	-0.3
2,120,921	-		Ga0059261_2022	0.15	-0.4
2,120,921	-		Ga0059261_2022	0.15	+0.4
2,120,921	-		Ga0059261_2022	0.15	+1.3
2,120,921	-		Ga0059261_2022	0.15	-0.3
2,120,926	+		Ga0059261_2022	0.15	+1.0
2,120,926	+		Ga0059261_2022	0.15	-1.7
2,120,927	-		Ga0059261_2022	0.15	+0.5
2,120,927	-		Ga0059261_2022	0.15	+0.5
2,120,998	+		Ga0059261_2022	0.20	-0.2
2,120,998	+		Ga0059261_2022	0.20	+1.0
2,120,998	+		Ga0059261_2022	0.20	-0.1
2,120,998	+		Ga0059261_2022	0.20	+0.1
2,120,998	+		Ga0059261_2022	0.20	-0.4
2,120,998	+		Ga0059261_2022	0.20	-0.6
2,120,998	+		Ga0059261_2022	0.20	-0.4
2,120,998	+		Ga0059261_2022	0.20	+0.0
2,120,998	+		Ga0059261_2022	0.20	+0.1
2,120,998	+		Ga0059261_2022	0.20	+0.9
2,120,999	-		Ga0059261_2022	0.20	+0.7
2,120,999	-		Ga0059261_2022	0.20	-0.4
2,120,999	-				+1.1
2,120,999	-		Ga0059261_2022	0.20	+0.3
2,120,999	-		Ga0059261_2022	0.20	+0.1
2,120,999	-		Ga0059261_2022	0.20	-0.1
2,120,999	-		Ga0059261_2022	0.20	+0.1
2,120,999	-		Ga0059261_2022	0.20	+0.1
2,120,999	-		Ga0059261_2022	0.20	+0.6
2,121,059	+		Ga0059261_2022	0.23	-0.4
2,121,217	+		Ga0059261_2022	0.33	+0.2
2,121,217	+		Ga0059261_2022	0.33	+2.1
2,121,217	+		Ga0059261_2022	0.33	-0.3
2,121,217	+		Ga0059261_2022	0.33	-1.0
2,121,217	+		Ga0059261_2022	0.33	+0.5
2,121,217	+		Ga0059261_2022	0.33	+0.1
2,121,217	+		Ga0059261_2022	0.33	+0.9
2,121,217	+		Ga0059261_2022	0.33	+0.3
2,121,217	+		Ga0059261_2022	0.33	+0.3
2,121,217	+		Ga0059261_2022	0.33	+0.1
2,121,218	-		Ga0059261_2022	0.33	-0.9
2,121,218	-		Ga0059261_2022	0.33	+0.6
2,121,218	-		Ga0059261_2022	0.33	+0.4
2,121,218	-		Ga0059261_2022	0.33	-2.3
2,121,218	-		Ga0059261_2022	0.33	+0.7
2,121,218	-		Ga0059261_2022	0.33	+0.2
2,121,218	-		Ga0059261_2022	0.33	-0.1
2,121,218	-		Ga0059261_2022	0.33	+0.5
2,121,289	+		Ga0059261_2022	0.37	+0.0
2,121,289	+		Ga0059261_2022	0.37	+0.3
2,121,289	+		Ga0059261_2022	0.37	-0.2
2,121,290	-		Ga0059261_2022	0.37	+0.7
2,121,290	-		Ga0059261_2022	0.37	-0.4
2,121,322	+				+0.1
2,121,466	+		Ga0059261_2022	0.48	-0.3
2,121,466	+		Ga0059261_2022	0.48	+0.3
2,121,466	+		Ga0059261_2022	0.48	+1.8
2,121,466	+		Ga0059261_2022	0.48	+0.5
2,121,466	+		Ga0059261_2022	0.48	+0.9
2,121,467	-		Ga0059261_2022	0.48	+1.1
2,121,467	-		Ga0059261_2022	0.48	+0.7
2,121,467	-		Ga0059261_2022	0.48	-0.1
2,121,508	+		Ga0059261_2022	0.51	+0.7
2,121,517	+		Ga0059261_2022	0.51	+1.5
2,121,517	+		Ga0059261_2022	0.51	-0.3
2,121,518	-		Ga0059261_2022	0.51	-0.1
2,121,518	-		Ga0059261_2022	0.51	-0.3
2,121,518	-		Ga0059261_2022	0.51	+0.6
2,121,603	-		Ga0059261_2022	0.56	+0.2
2,121,603	-		Ga0059261_2022	0.56	+0.2
2,121,604	+		Ga0059261_2022	0.56	+1.9
2,121,604	+		Ga0059261_2022	0.56	+0.1
2,121,604	+		Ga0059261_2022	0.56	-0.9
2,121,604	+		Ga0059261_2022	0.56	-0.8
2,121,604	+		Ga0059261_2022	0.56	-0.5
2,121,604	+		Ga0059261_2022	0.56	+0.9
2,121,604	+		Ga0059261_2022	0.56	+0.6
2,121,604	+		Ga0059261_2022	0.56	+0.8
2,121,604	+		Ga0059261_2022	0.56	-0.7
2,121,604	+		Ga0059261_2022	0.56	-0.2
2,121,604	+		Ga0059261_2022	0.56	+0.1
2,121,604	+		Ga0059261_2022	0.56	-0.1
2,121,604	+		Ga0059261_2022	0.56	-0.6
2,121,604	+		Ga0059261_2022	0.56	+0.5
2,121,605	-		Ga0059261_2022	0.56	+0.1
2,121,605	-		Ga0059261_2022	0.56	+0.5
2,121,605	-		Ga0059261_2022	0.56	+1.3
2,121,605	-		Ga0059261_2022	0.56	-0.9
2,121,605	-		Ga0059261_2022	0.56	+0.5
2,121,605	-		Ga0059261_2022	0.56	+0.7
2,121,605	-		Ga0059261_2022	0.56	-0.1
2,121,605	-		Ga0059261_2022	0.56	+0.2
2,121,605	-		Ga0059261_2022	0.56	-0.3
2,121,605	-		Ga0059261_2022	0.56	+0.3
2,121,605	-		Ga0059261_2022	0.56	+1.1
2,121,605	-		Ga0059261_2022	0.56	-1.1
2,121,605	-		Ga0059261_2022	0.56	+1.0
2,121,605	-		Ga0059261_2022	0.56	+0.1
2,121,605	-		Ga0059261_2022	0.56	-0.2
2,121,613	+		Ga0059261_2022	0.57	-0.3
2,121,613	+		Ga0059261_2022	0.57	-0.3
2,121,613	+		Ga0059261_2022	0.57	-0.1
2,121,613	+		Ga0059261_2022	0.57	+0.4
2,121,613	+		Ga0059261_2022	0.57	-0.1
2,121,614	-		Ga0059261_2022	0.57	+0.1
2,121,614	-				-1.2
2,121,614	-		Ga0059261_2022	0.57	-0.9
2,121,614	-		Ga0059261_2022	0.57	+0.6
2,121,614	-		Ga0059261_2022	0.57	+0.1
2,121,614	-		Ga0059261_2022	0.57	-0.5
2,121,614	-		Ga0059261_2022	0.57	-0.5
2,121,614	-		Ga0059261_2022	0.57	-0.5
2,121,614	-		Ga0059261_2022	0.57	+1.4