Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2015

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,111,760	+		Ga0059261_2014	0.25	+0.3
2,111,760	+		Ga0059261_2014	0.25	-0.1
2,111,760	+		Ga0059261_2014	0.25	+1.2
2,111,760	+		Ga0059261_2014	0.25	-0.1
2,111,760	+		Ga0059261_2014	0.25	-0.8
2,111,760	+		Ga0059261_2014	0.25	-0.3
2,111,760	+		Ga0059261_2014	0.25	+0.1
2,111,760	+				+1.1
2,111,761	-		Ga0059261_2014	0.25	+1.1
2,111,761	-		Ga0059261_2014	0.25	-0.0
2,111,761	-		Ga0059261_2014	0.25	+0.7
2,111,761	-		Ga0059261_2014	0.25	+0.5
2,111,761	-		Ga0059261_2014	0.25	+0.1
2,111,761	-		Ga0059261_2014	0.25	+0.1
2,112,015	+		Ga0059261_2014	0.48	-0.8
2,112,015	+		Ga0059261_2014	0.48	+2.7
2,112,015	+		Ga0059261_2014	0.48	-0.2
2,112,015	+		Ga0059261_2014	0.48	+0.0
2,112,015	+		Ga0059261_2014	0.48	-0.1
2,112,016	-				+1.1
2,112,016	-		Ga0059261_2014	0.48	+0.8
2,112,016	-		Ga0059261_2014	0.48	-0.3
2,112,119	+		Ga0059261_2014	0.57	+0.5
2,112,119	+		Ga0059261_2014	0.57	-0.1
2,112,119	+		Ga0059261_2014	0.57	+0.7
2,112,119	+		Ga0059261_2014	0.57	+0.7
2,112,120	-		Ga0059261_2014	0.57	+0.2
2,112,120	-		Ga0059261_2014	0.57	-1.1
2,112,157	+		Ga0059261_2014	0.60	-0.3
2,112,157	+		Ga0059261_2014	0.60	+0.1
2,112,157	+		Ga0059261_2014	0.60	-0.0
2,112,158	-		Ga0059261_2014	0.60	+0.3
2,112,158	-		Ga0059261_2014	0.60	+0.7
2,112,158	-		Ga0059261_2014	0.60	-0.2
2,112,158	-		Ga0059261_2014	0.60	+0.4
2,112,158	-		Ga0059261_2014	0.60	-0.9
2,112,318	+		Ga0059261_2014	0.74	-1.2
2,112,319	-		Ga0059261_2014	0.74	-0.7
2,112,319	-		Ga0059261_2014	0.74	-0.1
2,112,319	-				-0.9
2,112,319	-		Ga0059261_2014	0.74	+0.2
2,112,345	+		Ga0059261_2014	0.77	-0.5
2,112,345	+		Ga0059261_2014	0.77	-0.0
2,112,345	+		Ga0059261_2014	0.77	+0.0
2,112,345	+		Ga0059261_2014	0.77	-0.0
2,112,345	+		Ga0059261_2014	0.77	+0.0
2,112,345	+				+0.5
2,112,345	+		Ga0059261_2014	0.77	-0.5
2,112,346	-		Ga0059261_2014	0.77	+0.8
2,112,346	-		Ga0059261_2014	0.77	+0.7
2,112,346	-		Ga0059261_2014	0.77	-0.6
2,112,346	-		Ga0059261_2014	0.77	+0.3
2,112,346	-		Ga0059261_2014	0.77	+1.1
2,112,346	-		Ga0059261_2014	0.77	-0.1
2,112,346	-		Ga0059261_2014	0.77	-0.2
2,112,346	-		Ga0059261_2014	0.77	-1.7
2,112,374	+		Ga0059261_2014	0.79	+0.5
2,112,374	+		Ga0059261_2014	0.79	-0.8
2,112,374	+		Ga0059261_2014	0.79	+0.2
2,112,375	-		Ga0059261_2014	0.79	+0.1
2,112,375	-		Ga0059261_2014	0.79	-0.4
2,112,375	-		Ga0059261_2014	0.79	-0.5
2,112,375	-		Ga0059261_2014	0.79	-0.7
2,112,375	-		Ga0059261_2014	0.79	-0.1
2,112,375	-		Ga0059261_2014	0.79	-1.7
2,112,375	-		Ga0059261_2014	0.79	-0.3
2,112,615	-				-0.1
2,112,615	-				+0.1
2,112,615	-				+0.3
2,112,620	+				-0.2
2,112,620	+				-0.2
2,112,620	+				-0.2
2,112,621	-				+0.2
2,112,641	+				-0.6
2,112,772	+		Ga0059261_2015	0.27	-1.1
2,112,787	+		Ga0059261_2015	0.29	+0.1
2,112,996	-		Ga0059261_2015	0.62	+0.5
2,113,099	-		Ga0059261_2015	0.79	-0.3
2,113,109	+		Ga0059261_2015	0.80	+0.1
2,113,109	+		Ga0059261_2015	0.80	+0.5
2,113,109	+		Ga0059261_2015	0.80	-1.1
2,113,110	-		Ga0059261_2015	0.81	-0.6
2,113,110	-		Ga0059261_2015	0.81	-0.5
2,113,110	-		Ga0059261_2015	0.81	-0.5
2,113,146	-		Ga0059261_2015	0.86	-1.7
2,113,289	+				+0.5
2,113,290	-				+0.6
2,113,290	-				-0.3
2,113,330	+				-0.9
2,113,330	+				-0.4
2,113,330	+				-0.3
2,113,330	+				-0.4
2,113,330	+				-0.3
2,113,330	+				-0.3
2,113,331	-				-0.0
2,113,514	+		Ga0059261_2016	0.14	-0.6
2,113,514	+		Ga0059261_2016	0.14	-0.1
2,113,515	-		Ga0059261_2016	0.14	+0.5
2,113,515	-		Ga0059261_2016	0.14	+0.7
2,113,515	-		Ga0059261_2016	0.14	-0.3
2,113,573	+		Ga0059261_2016	0.17	-0.3
2,113,573	+		Ga0059261_2016	0.17	+0.0
2,113,573	+		Ga0059261_2016	0.17	-1.5
2,113,573	+		Ga0059261_2016	0.17	-0.4
2,113,573	+		Ga0059261_2016	0.17	+2.9
2,113,574	-		Ga0059261_2016	0.17	-1.5
2,113,574	-		Ga0059261_2016	0.17	-2.5
2,113,574	-		Ga0059261_2016	0.17	-1.3
2,113,574	-		Ga0059261_2016	0.17	-0.9
2,113,574	-		Ga0059261_2016	0.17	-0.1
2,113,628	-		Ga0059261_2016	0.20	+0.0
2,113,628	-		Ga0059261_2016	0.20	-0.2
2,113,714	+		Ga0059261_2016	0.24	+0.1
2,113,715	-		Ga0059261_2016	0.24	+0.9
2,113,779	+		Ga0059261_2016	0.27	-0.3
2,113,779	+		Ga0059261_2016	0.27	-0.7
2,113,779	+		Ga0059261_2016	0.27	+0.6
2,113,780	-		Ga0059261_2016	0.28	-0.5
2,113,822	-		Ga0059261_2016	0.30	-0.8
2,113,822	-		Ga0059261_2016	0.30	+0.4
2,113,864	+		Ga0059261_2016	0.32	+0.4
2,114,053	+		Ga0059261_2016	0.41	+0.1
2,114,054	-		Ga0059261_2016	0.41	-0.7
2,114,054	-		Ga0059261_2016	0.41	+0.0
2,114,054	-		Ga0059261_2016	0.41	-0.4
2,114,121	+		Ga0059261_2016	0.45	-0.4
2,114,121	+		Ga0059261_2016	0.45	-1.0
2,114,122	-		Ga0059261_2016	0.45	+0.8
2,114,122	-		Ga0059261_2016	0.45	-0.2
2,114,122	-				+0.1
2,114,122	-		Ga0059261_2016	0.45	-0.1