Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2013

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,110,578	+				-0.3
2,110,725	+		Ga0059261_2013	0.16	-0.5
2,110,725	+		Ga0059261_2013	0.16	-1.0
2,110,725	+		Ga0059261_2013	0.16	+0.5
2,110,725	+		Ga0059261_2013	0.16	+0.2
2,110,725	+		Ga0059261_2013	0.16	+0.4
2,110,725	+		Ga0059261_2013	0.16	-0.7
2,110,725	+				+0.1
2,110,726	-		Ga0059261_2013	0.16	-0.5
2,110,726	-		Ga0059261_2013	0.16	+0.1
2,110,726	-		Ga0059261_2013	0.16	+0.3
2,110,726	-		Ga0059261_2013	0.16	-0.7
2,110,726	-		Ga0059261_2013	0.16	-0.1
2,110,726	-		Ga0059261_2013	0.16	+0.4
2,110,726	-		Ga0059261_2013	0.16	-1.0
2,110,788	+		Ga0059261_2013	0.23	+2.7
2,110,788	+		Ga0059261_2013	0.23	+1.8
2,110,788	+		Ga0059261_2013	0.23	-0.6
2,110,788	+		Ga0059261_2013	0.23	-0.3
2,110,788	+		Ga0059261_2013	0.23	-0.0
2,110,788	+		Ga0059261_2013	0.23	-1.7
2,110,788	+		Ga0059261_2013	0.23	-0.6
2,110,789	-				-0.9
2,110,789	-		Ga0059261_2013	0.23	-0.9
2,110,789	-		Ga0059261_2013	0.23	-0.5
2,110,789	-				+1.1
2,110,789	-		Ga0059261_2013	0.23	-0.2
2,110,794	+		Ga0059261_2013	0.24	-1.0
2,110,794	+		Ga0059261_2013	0.24	-1.3
2,110,795	-		Ga0059261_2013	0.24	-0.3
2,110,800	+		Ga0059261_2013	0.24	-1.2
2,110,800	+		Ga0059261_2013	0.24	+0.7
2,110,800	+		Ga0059261_2013	0.24	-0.2
2,110,801	-		Ga0059261_2013	0.25	+1.4
2,110,801	-		Ga0059261_2013	0.25	-0.7
2,110,801	-		Ga0059261_2013	0.25	-0.3
2,110,801	-		Ga0059261_2013	0.25	-0.5
2,110,801	-		Ga0059261_2013	0.25	-0.1
2,110,801	-		Ga0059261_2013	0.25	-0.8
2,110,806	+		Ga0059261_2013	0.25	+0.4
2,110,806	+		Ga0059261_2013	0.25	-1.3
2,110,806	+		Ga0059261_2013	0.25	-0.8
2,110,806	+		Ga0059261_2013	0.25	-0.3
2,110,807	-		Ga0059261_2013	0.25	-1.3
2,110,807	-		Ga0059261_2013	0.25	+0.5
2,110,807	-		Ga0059261_2013	0.25	+0.5
2,110,917	+		Ga0059261_2013	0.38	-0.6
2,110,917	+		Ga0059261_2013	0.38	-0.1
2,110,917	+		Ga0059261_2013	0.38	+0.7
2,110,917	+		Ga0059261_2013	0.38	-0.7
2,110,917	+				+1.1
2,110,917	+		Ga0059261_2013	0.38	-1.1
2,110,918	-		Ga0059261_2013	0.38	-0.6
2,110,918	-		Ga0059261_2013	0.38	-1.1
2,110,919	+		Ga0059261_2013	0.38	+0.5
2,110,919	+		Ga0059261_2013	0.38	+0.4
2,110,919	+		Ga0059261_2013	0.38	-1.9
2,110,920	-		Ga0059261_2013	0.38	+0.4
2,110,920	-		Ga0059261_2013	0.38	+0.7
2,110,920	-		Ga0059261_2013	0.38	-0.8
2,110,920	-		Ga0059261_2013	0.38	-1.5
2,110,920	-		Ga0059261_2013	0.38	-1.0
2,110,977	+		Ga0059261_2013	0.45	-2.1
2,110,977	+		Ga0059261_2013	0.45	-0.0
2,110,977	+		Ga0059261_2013	0.45	-0.9
2,110,977	+		Ga0059261_2013	0.45	-1.4
2,110,977	+		Ga0059261_2013	0.45	-0.8
2,110,977	+				+0.5
2,110,977	+		Ga0059261_2013	0.45	-0.6
2,110,977	+		Ga0059261_2013	0.45	-0.9
2,110,977	+		Ga0059261_2013	0.45	-0.9
2,110,977	+		Ga0059261_2013	0.45	+0.3
2,110,977	+		Ga0059261_2013	0.45	-1.0
2,110,978	-		Ga0059261_2013	0.45	+0.1
2,110,978	-		Ga0059261_2013	0.45	-0.2
2,110,978	-		Ga0059261_2013	0.45	-1.4
2,110,978	-		Ga0059261_2013	0.45	-1.1
2,110,978	-		Ga0059261_2013	0.45	-0.9
2,110,978	-		Ga0059261_2013	0.45	-0.1
2,110,979	+		Ga0059261_2013	0.45	-0.5
2,110,979	+		Ga0059261_2013	0.45	+0.5
2,110,979	+		Ga0059261_2013	0.45	+0.6
2,110,979	+		Ga0059261_2013	0.45	-0.5
2,110,980	-				+0.1
2,111,085	+		Ga0059261_2013	0.57	+0.5
2,111,085	+		Ga0059261_2013	0.57	-1.5
2,111,086	-		Ga0059261_2013	0.57	-0.0
2,111,086	-		Ga0059261_2013	0.57	-0.3
2,111,086	-		Ga0059261_2013	0.57	+0.1
2,111,086	-		Ga0059261_2013	0.57	-1.0
2,111,086	-		Ga0059261_2013	0.57	+0.5
2,111,086	-		Ga0059261_2013	0.57	-1.2
2,111,086	-		Ga0059261_2013	0.57	-0.2
2,111,172	+		Ga0059261_2013	0.67	-0.6
2,111,172	+		Ga0059261_2013	0.67	+0.7
2,111,172	+		Ga0059261_2013	0.67	-0.1
2,111,172	+		Ga0059261_2013	0.67	-0.5
2,111,173	-		Ga0059261_2013	0.67	-2.2
2,111,173	-		Ga0059261_2013	0.67	+0.5
2,111,173	-		Ga0059261_2013	0.67	-0.8
2,111,173	-		Ga0059261_2013	0.67	-1.1
2,111,173	-		Ga0059261_2013	0.67	-2.1
2,111,333	+		Ga0059261_2013	0.85	-1.2
2,111,333	+		Ga0059261_2013	0.85	-0.7
2,111,334	-		Ga0059261_2013	0.85	-1.1
2,111,464	-				-1.3
2,111,760	+		Ga0059261_2014	0.25	+0.3
2,111,760	+		Ga0059261_2014	0.25	-0.1
2,111,760	+		Ga0059261_2014	0.25	+1.2
2,111,760	+		Ga0059261_2014	0.25	-0.1
2,111,760	+		Ga0059261_2014	0.25	-0.8
2,111,760	+		Ga0059261_2014	0.25	-0.3
2,111,760	+		Ga0059261_2014	0.25	+0.1
2,111,760	+				+1.1
2,111,761	-		Ga0059261_2014	0.25	+1.1
2,111,761	-		Ga0059261_2014	0.25	-0.0
2,111,761	-		Ga0059261_2014	0.25	+0.7
2,111,761	-		Ga0059261_2014	0.25	+0.5
2,111,761	-		Ga0059261_2014	0.25	+0.1
2,111,761	-		Ga0059261_2014	0.25	+0.1
2,112,015	+		Ga0059261_2014	0.48	-0.8
2,112,015	+		Ga0059261_2014	0.48	+2.7
2,112,015	+		Ga0059261_2014	0.48	-0.2
2,112,015	+		Ga0059261_2014	0.48	+0.0
2,112,015	+		Ga0059261_2014	0.48	-0.1
2,112,016	-				+1.1
2,112,016	-		Ga0059261_2014	0.48	+0.8
2,112,016	-		Ga0059261_2014	0.48	-0.3
2,112,119	+		Ga0059261_2014	0.57	+0.5
2,112,119	+		Ga0059261_2014	0.57	-0.1
2,112,119	+		Ga0059261_2014	0.57	+0.7
2,112,119	+		Ga0059261_2014	0.57	+0.7
2,112,120	-		Ga0059261_2014	0.57	+0.2
2,112,120	-		Ga0059261_2014	0.57	-1.1
2,112,157	+		Ga0059261_2014	0.60	-0.3
2,112,157	+		Ga0059261_2014	0.60	+0.1
2,112,157	+		Ga0059261_2014	0.60	-0.0
2,112,158	-		Ga0059261_2014	0.60	+0.3
2,112,158	-		Ga0059261_2014	0.60	+0.7
2,112,158	-		Ga0059261_2014	0.60	-0.2
2,112,158	-		Ga0059261_2014	0.60	+0.4
2,112,158	-		Ga0059261_2014	0.60	-0.9
2,112,318	+		Ga0059261_2014	0.74	-1.2
2,112,319	-		Ga0059261_2014	0.74	-0.7
2,112,319	-		Ga0059261_2014	0.74	-0.1
2,112,319	-				-0.9
2,112,319	-		Ga0059261_2014	0.74	+0.2
2,112,345	+		Ga0059261_2014	0.77	-0.5
2,112,345	+		Ga0059261_2014	0.77	-0.0
2,112,345	+		Ga0059261_2014	0.77	+0.0
2,112,345	+		Ga0059261_2014	0.77	-0.0
2,112,345	+		Ga0059261_2014	0.77	+0.0
2,112,345	+				+0.5
2,112,345	+		Ga0059261_2014	0.77	-0.5
2,112,346	-		Ga0059261_2014	0.77	+0.8
2,112,346	-		Ga0059261_2014	0.77	+0.7
2,112,346	-		Ga0059261_2014	0.77	-0.6
2,112,346	-		Ga0059261_2014	0.77	+0.3
2,112,346	-		Ga0059261_2014	0.77	+1.1
2,112,346	-		Ga0059261_2014	0.77	-0.1
2,112,346	-		Ga0059261_2014	0.77	-0.2
2,112,346	-		Ga0059261_2014	0.77	-1.7
2,112,374	+		Ga0059261_2014	0.79	+0.5
2,112,374	+		Ga0059261_2014	0.79	-0.8
2,112,374	+		Ga0059261_2014	0.79	+0.2
2,112,375	-		Ga0059261_2014	0.79	+0.1
2,112,375	-		Ga0059261_2014	0.79	-0.4
2,112,375	-		Ga0059261_2014	0.79	-0.5
2,112,375	-		Ga0059261_2014	0.79	-0.7
2,112,375	-		Ga0059261_2014	0.79	-0.1
2,112,375	-		Ga0059261_2014	0.79	-1.7
2,112,375	-		Ga0059261_2014	0.79	-0.3