Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2009

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,106,483	+		Ga0059261_2008	0.44	-1.0
2,106,483	+		Ga0059261_2008	0.44	-0.8
2,106,483	+		Ga0059261_2008	0.44	-0.5
2,106,484	-		Ga0059261_2008	0.44	-1.3
2,106,484	-		Ga0059261_2008	0.44	-1.1
2,106,484	-		Ga0059261_2008	0.44	-0.9
2,106,484	-		Ga0059261_2008	0.44	-0.2
2,106,484	-		Ga0059261_2008	0.44	+0.1
2,106,484	-		Ga0059261_2008	0.44	-0.5
2,106,484	-		Ga0059261_2008	0.44	-1.7
2,106,499	-		Ga0059261_2008	0.45	-1.5
2,106,499	-		Ga0059261_2008	0.45	+0.1
2,106,499	-		Ga0059261_2008	0.45	-1.0
2,106,573	+		Ga0059261_2008	0.49	-0.5
2,106,573	+		Ga0059261_2008	0.49	-0.6
2,106,573	+		Ga0059261_2008	0.49	-1.9
2,106,573	+		Ga0059261_2008	0.49	-0.6
2,106,574	-		Ga0059261_2008	0.49	-0.2
2,106,574	-		Ga0059261_2008	0.49	-2.2
2,106,574	-		Ga0059261_2008	0.49	-0.2
2,106,612	+		Ga0059261_2008	0.52	-1.5
2,106,613	-		Ga0059261_2008	0.52	-0.1
2,106,613	-		Ga0059261_2008	0.52	-1.2
2,106,613	-		Ga0059261_2008	0.52	-0.2
2,106,645	+		Ga0059261_2008	0.54	-2.4
2,106,645	+		Ga0059261_2008	0.54	-0.5
2,106,645	+		Ga0059261_2008	0.54	+0.1
2,106,645	+		Ga0059261_2008	0.54	-1.7
2,106,645	+		Ga0059261_2008	0.54	+1.0
2,106,645	+		Ga0059261_2008	0.54	-1.1
2,106,645	+				+1.1
2,106,645	+		Ga0059261_2008	0.54	+0.8
2,106,645	+		Ga0059261_2008	0.54	-0.8
2,106,645	+		Ga0059261_2008	0.54	+0.8
2,106,646	-		Ga0059261_2008	0.54	-1.2
2,106,646	-		Ga0059261_2008	0.54	-0.5
2,106,646	-		Ga0059261_2008	0.54	-1.1
2,106,646	-		Ga0059261_2008	0.54	-0.3
2,106,646	-		Ga0059261_2008	0.54	-1.0
2,106,646	-		Ga0059261_2008	0.54	+0.8
2,106,665	-				+0.5
2,106,871	+		Ga0059261_2008	0.67	-0.6
2,106,872	-		Ga0059261_2008	0.67	-0.4
2,106,897	+		Ga0059261_2008	0.69	-0.9
2,106,897	+		Ga0059261_2008	0.69	-0.9
2,106,897	+		Ga0059261_2008	0.69	+0.1
2,106,897	+		Ga0059261_2008	0.69	-2.3
2,106,898	-		Ga0059261_2008	0.69	-1.2
2,106,898	-		Ga0059261_2008	0.69	-2.6
2,106,898	-		Ga0059261_2008	0.69	+0.7
2,106,898	-		Ga0059261_2008	0.69	-2.0
2,106,898	-		Ga0059261_2008	0.69	+1.1
2,106,898	-		Ga0059261_2008	0.69	-0.8
2,106,898	-		Ga0059261_2008	0.69	-0.5
2,106,915	+		Ga0059261_2008	0.70	+0.5
2,106,915	+		Ga0059261_2008	0.70	-1.7
2,106,915	+		Ga0059261_2008	0.70	+1.1
2,106,915	+		Ga0059261_2008	0.70	-0.9
2,106,915	+		Ga0059261_2008	0.70	-1.6
2,106,916	-		Ga0059261_2008	0.70	-0.5
2,106,949	+		Ga0059261_2008	0.72	-0.9
2,107,195	+		Ga0059261_2008	0.86	-1.3
2,107,195	+		Ga0059261_2008	0.86	-1.7
2,107,196	-		Ga0059261_2008	0.86	-1.3
2,107,197	+		Ga0059261_2008	0.86	-1.1
2,107,197	+		Ga0059261_2008	0.86	-0.7
2,107,197	+		Ga0059261_2008	0.86	-0.8
2,107,198	-		Ga0059261_2008	0.87	-0.6
2,107,198	-		Ga0059261_2008	0.87	-0.5
2,107,198	-		Ga0059261_2008	0.87	-1.1
2,107,293	+				-0.6
2,107,294	-				-0.9
2,107,294	-				-0.4
2,107,308	+				-1.1
2,107,428	+				-0.7
2,107,428	+				+0.7
2,107,429	-				-1.2
2,107,429	-				+0.2
2,107,429	-				-0.8
2,107,621	+		Ga0059261_2009	0.17	-0.4
2,107,621	+		Ga0059261_2009	0.17	+0.5
2,107,622	-		Ga0059261_2009	0.17	-0.1
2,107,622	-		Ga0059261_2009	0.17	-0.2
2,107,623	+		Ga0059261_2009	0.17	-1.7
2,107,623	+		Ga0059261_2009	0.17	-0.5
2,107,623	+		Ga0059261_2009	0.17	-0.1
2,107,623	+		Ga0059261_2009	0.17	-1.2
2,107,623	+		Ga0059261_2009	0.17	+0.1
2,107,623	+		Ga0059261_2009	0.17	-0.1
2,107,623	+		Ga0059261_2009	0.17	-1.3
2,107,623	+		Ga0059261_2009	0.17	+0.5
2,107,623	+		Ga0059261_2009	0.17	-0.7
2,107,623	+		Ga0059261_2009	0.17	-0.1
2,107,623	+		Ga0059261_2009	0.17	-1.1
2,107,623	+		Ga0059261_2009	0.17	+0.4
2,107,623	+				+0.5
2,107,623	+		Ga0059261_2009	0.17	-0.7
2,107,623	+		Ga0059261_2009	0.17	-0.5
2,107,623	+		Ga0059261_2009	0.17	+0.4
2,107,623	+		Ga0059261_2009	0.17	+0.8
2,107,623	+		Ga0059261_2009	0.17	-0.9
2,107,623	+		Ga0059261_2009	0.17	+0.2
2,107,623	+		Ga0059261_2009	0.17	-0.8
2,107,623	+				+1.1
2,107,623	+		Ga0059261_2009	0.17	-0.0
2,107,623	+		Ga0059261_2009	0.17	-0.7
2,107,624	-		Ga0059261_2009	0.17	+1.4
2,107,624	-		Ga0059261_2009	0.17	-0.1
2,107,624	-		Ga0059261_2009	0.17	+0.1
2,107,624	-		Ga0059261_2009	0.17	+0.6
2,107,624	-		Ga0059261_2009	0.17	-0.6
2,107,624	-		Ga0059261_2009	0.17	+0.3
2,107,624	-		Ga0059261_2009	0.17	-1.2
2,107,624	-		Ga0059261_2009	0.17	-1.3
2,107,624	-		Ga0059261_2009	0.17	-0.2
2,107,624	-		Ga0059261_2009	0.17	+0.7
2,107,624	-		Ga0059261_2009	0.17	+0.0
2,107,624	-		Ga0059261_2009	0.17	+0.2
2,107,624	-		Ga0059261_2009	0.17	-0.6
2,107,624	-		Ga0059261_2009	0.17	-1.2
2,107,624	-		Ga0059261_2009	0.17	-0.7
2,107,665	+		Ga0059261_2009	0.20	-1.1
2,107,666	-		Ga0059261_2009	0.21	-0.5
2,107,666	-		Ga0059261_2009	0.21	-1.1
2,107,859	-		Ga0059261_2009	0.37	+0.7
2,107,864	-		Ga0059261_2009	0.38	+0.1
2,107,864	-		Ga0059261_2009	0.38	-1.3
2,107,944	+		Ga0059261_2009	0.45	-0.8
2,107,944	+		Ga0059261_2009	0.45	-1.1
2,107,945	-		Ga0059261_2009	0.45	+0.1
2,107,945	-		Ga0059261_2009	0.45	-0.1
2,107,950	+		Ga0059261_2009	0.45	-0.5
2,107,950	+		Ga0059261_2009	0.45	+1.9
2,107,950	+		Ga0059261_2009	0.45	-1.2
2,107,951	-		Ga0059261_2009	0.45	-0.1
2,107,951	-		Ga0059261_2009	0.45	+0.4
2,107,951	-		Ga0059261_2009	0.45	-0.4
2,107,960	-		Ga0059261_2009	0.46	+0.4
2,108,145	+		Ga0059261_2009	0.62	-0.3
2,108,275	+		Ga0059261_2009	0.73	-1.2
2,108,275	+		Ga0059261_2009	0.73	-0.5
2,108,275	+		Ga0059261_2009	0.73	-0.4
2,108,276	-		Ga0059261_2009	0.73	+0.8
2,108,580	+				-1.3
2,108,581	-				-0.9
2,108,581	-				+0.3
2,108,663	+				-0.5
2,108,663	+				-0.5
2,108,663	+				-0.4
2,108,663	+				+0.1
2,108,663	+				-0.1
2,108,663	+				-0.4
2,108,664	-				-2.1
2,108,664	-				-0.2
2,108,664	-				-0.5
2,108,664	-				-2.1
2,108,664	-				+0.2
2,108,664	-				+0.3
2,108,664	-				-0.5
2,108,664	-				+0.4
2,108,664	-				-0.1
2,108,664	-				+0.8
2,108,664	-				-1.4
2,108,664	-				-1.0
2,108,664	-				-0.4
2,108,665	+				-0.3
2,108,665	+				+0.2
2,108,665	+				+1.1
2,108,665	+				-1.8
2,108,665	+				-1.3
2,108,665	+				-0.3
2,108,666	-				-0.5
2,108,666	-				+0.1
2,108,666	-				-1.2
2,108,666	-				-0.1
2,108,666	-				-0.0
2,108,666	-				+0.1
2,108,666	-				+0.1
2,108,691	+				-0.0
2,108,691	+				-0.3
2,108,717	+				-0.5
2,108,718	-				+1.4