Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2005

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,103,015	+				-0.1
2,103,015	+				+1.7
2,103,015	+				-0.7
2,103,015	+				-0.6
2,103,015	+				-0.5
2,103,015	+				+0.2
2,103,016	-				+0.2
2,103,016	-				-0.6
2,103,016	-				-0.1
2,103,016	-				-0.4
2,103,016	-				-0.9
2,103,021	-				-0.5
2,103,021	-				-1.6
2,103,021	-				+0.3
2,103,061	+				-0.2
2,103,061	+				-0.2
2,103,061	+				+0.1
2,103,061	+				+0.3
2,103,062	-				+0.4
2,103,062	-				-0.4
2,103,062	-				+0.6
2,103,062	-				+1.1
2,103,062	-				-1.1
2,103,062	-				-0.5
2,103,062	-				+0.0
2,103,157	+				-0.2
2,103,157	+				+0.1
2,103,157	+				-0.7
2,103,157	+				+0.1
2,103,157	+				-0.3
2,103,157	+				-0.2
2,103,158	-				-0.8
2,103,158	-				-0.4
2,103,158	-				-0.5
2,103,158	-				+0.1
2,103,158	-				+0.5
2,103,158	-				+0.9
2,103,158	-				-0.2
2,103,158	-				-0.3
2,103,158	-				+0.2
2,103,166	+				+0.3
2,103,166	+				+0.1
2,103,166	+				-0.1
2,103,166	+				-1.1
2,103,166	+				-0.2
2,103,166	+				-0.5
2,103,166	+				+0.8
2,103,166	+				-0.5
2,103,166	+				-1.1
2,103,166	+				-0.3
2,103,167	-				-1.9
2,103,167	-				-1.4
2,103,167	-				+2.7
2,103,167	-				-0.3
2,103,232	+		Ga0059261_2003	0.20	+0.1
2,103,233	-		Ga0059261_2003	0.20	-0.2
2,103,233	-		Ga0059261_2003	0.20	-0.3
2,103,233	-		Ga0059261_2003	0.20	-0.3
2,103,233	-		Ga0059261_2003	0.20	-1.2
2,103,233	-		Ga0059261_2003	0.20	-0.4
2,103,233	-		Ga0059261_2003	0.20	+1.4
2,103,233	-		Ga0059261_2003	0.20	-0.5
2,103,310	+		Ga0059261_2003	0.34	-0.5
2,103,311	-		Ga0059261_2003	0.34	-0.5
2,103,340	+		Ga0059261_2003	0.40	-0.4
2,103,340	+		Ga0059261_2003	0.40	+0.1
2,103,340	+		Ga0059261_2003	0.40	-0.4
2,103,341	-		Ga0059261_2003	0.40	-0.5
2,103,341	-		Ga0059261_2003	0.40	-0.1
2,103,341	-		Ga0059261_2003	0.40	-0.7
2,103,341	-		Ga0059261_2003	0.40	-0.1
2,103,341	-		Ga0059261_2003	0.40	-1.2
2,103,341	-		Ga0059261_2003	0.40	-0.2
2,103,341	-				-0.5
2,103,388	+		Ga0059261_2003	0.49	-0.0
2,103,388	+		Ga0059261_2003	0.49	-0.1
2,103,388	+		Ga0059261_2003	0.49	-0.0
2,103,389	-		Ga0059261_2003	0.49	-0.7
2,103,389	-		Ga0059261_2003	0.49	-0.3
2,103,389	-		Ga0059261_2003	0.49	-0.7
2,103,575	-		Ga0059261_2003	0.83	+0.1
2,103,575	-		Ga0059261_2003	0.83	+1.4
2,103,642	-				+0.1
2,103,854	+				-0.7
2,103,855	-				-1.5
2,103,867	-				-2.3
2,103,897	+		Ga0059261_2005	0.10	-2.1
2,103,897	+		Ga0059261_2005	0.10	-1.1
2,103,898	-				+2.1
2,103,980	+		Ga0059261_2005	0.19	-1.1
2,103,980	+		Ga0059261_2005	0.19	-1.2
2,103,981	-		Ga0059261_2005	0.19	-2.2
2,104,043	+				-0.5
2,104,043	+		Ga0059261_2005	0.26	-0.7
2,104,043	+		Ga0059261_2005	0.26	-0.5
2,104,044	-		Ga0059261_2005	0.26	-0.5
2,104,044	-		Ga0059261_2005	0.26	-1.5
2,104,116	-		Ga0059261_2005	0.34	-1.5
2,104,307	+		Ga0059261_2005	0.56	-0.9
2,104,308	-		Ga0059261_2005	0.56	-0.3
2,104,319	+		Ga0059261_2005	0.57	-2.1
2,104,319	+				-0.5
2,104,319	+		Ga0059261_2005	0.57	-1.9
2,104,319	+				+1.1
2,104,319	+		Ga0059261_2005	0.57	-0.5
2,104,319	+		Ga0059261_2005	0.57	-2.6
2,104,320	-		Ga0059261_2005	0.57	+1.1
2,104,320	-		Ga0059261_2005	0.57	-0.7
2,104,320	-		Ga0059261_2005	0.57	-1.1
2,104,358	+		Ga0059261_2005	0.61	-0.5
2,104,358	+		Ga0059261_2005	0.61	-2.1
2,104,359	-		Ga0059261_2005	0.61	+0.1
2,104,359	-		Ga0059261_2005	0.61	-0.5
2,104,359	-		Ga0059261_2005	0.61	-0.3
2,104,359	-		Ga0059261_2005	0.61	+1.1
2,104,499	+		Ga0059261_2005	0.77	-1.7
2,104,499	+		Ga0059261_2005	0.77	-0.5
2,104,500	-				+0.1
2,104,500	-				+0.7
2,104,549	+		Ga0059261_2005	0.82	-1.9
2,104,550	-		Ga0059261_2005	0.83	+0.1
2,104,719	+				-0.2
2,104,719	+				-0.5
2,104,721	+				-0.5
2,104,722	-				+1.1
2,104,722	-				-1.2
2,104,863	+		Ga0059261_2006	0.21	-1.1
2,104,863	+		Ga0059261_2006	0.21	-0.9
2,104,864	-		Ga0059261_2006	0.21	-0.4
2,104,908	-		Ga0059261_2006	0.28	-0.3
2,104,908	-				+1.1
2,104,908	-		Ga0059261_2006	0.28	+0.2
2,104,908	-		Ga0059261_2006	0.28	-0.2
2,104,908	-		Ga0059261_2006	0.28	-0.1
2,104,918	-		Ga0059261_2006	0.29	+1.3
2,104,998	+		Ga0059261_2006	0.41	-0.2
2,104,998	+		Ga0059261_2006	0.41	-1.5
2,104,998	+		Ga0059261_2006	0.41	+0.3
2,104,998	+		Ga0059261_2006	0.41	+0.9
2,104,998	+				+0.8
2,104,998	+		Ga0059261_2006	0.41	-0.0
2,104,998	+		Ga0059261_2006	0.41	-0.3
2,104,998	+		Ga0059261_2006	0.41	+0.1
2,104,998	+		Ga0059261_2006	0.41	+0.4
2,104,998	+		Ga0059261_2006	0.41	-0.8
2,104,998	+		Ga0059261_2006	0.41	-0.2
2,104,998	+		Ga0059261_2006	0.41	-0.0
2,104,998	+		Ga0059261_2006	0.41	-0.2
2,104,998	+		Ga0059261_2006	0.41	+0.0
2,104,998	+		Ga0059261_2006	0.41	+0.1
2,104,998	+		Ga0059261_2006	0.41	-0.5
2,104,998	+		Ga0059261_2006	0.41	+0.5
2,104,998	+		Ga0059261_2006	0.41	+0.1
2,104,999	-		Ga0059261_2006	0.41	+0.0
2,104,999	-		Ga0059261_2006	0.41	-1.5
2,104,999	-		Ga0059261_2006	0.41	-0.7
2,104,999	-		Ga0059261_2006	0.41	+0.1
2,104,999	-		Ga0059261_2006	0.41	-0.3
2,104,999	-		Ga0059261_2006	0.41	-0.5
2,104,999	-		Ga0059261_2006	0.41	+0.1
2,104,999	-		Ga0059261_2006	0.41	-0.4
2,104,999	-		Ga0059261_2006	0.41	+1.0
2,104,999	-		Ga0059261_2006	0.41	-0.2
2,104,999	-		Ga0059261_2006	0.41	-0.1
2,104,999	-		Ga0059261_2006	0.41	-0.5
2,105,077	+				+0.1
2,105,078	-		Ga0059261_2006	0.53	+0.1
2,105,304	+		Ga0059261_2006	0.86	-0.2
2,105,305	-		Ga0059261_2006	0.86	-0.6
2,105,340	+				+0.2
2,105,340	+				-0.1
2,105,340	+				+0.4
2,105,340	+				+0.2
2,105,341	-				-0.7
2,105,341	-				+0.6
2,105,410	+				+0.2
2,105,410	+				-1.0
2,105,410	+				+0.0
2,105,410	+				-0.2
2,105,410	+				+0.3
2,105,410	+				+0.4
2,105,411	-				-0.2
2,105,411	-				+1.3
2,105,411	-				-1.1
2,105,412	+				+0.1
2,105,412	+				-1.3
2,105,412	+				+0.3
2,105,412	+				+0.6
2,105,412	+				-0.0
2,105,412	+				+1.1
2,105,412	+				+0.0
2,105,412	+				-0.1
2,105,412	+				-0.7
2,105,413	-				-0.7
2,105,413	-				-0.6
2,105,413	-				-0.1
2,105,413	-				+0.5
2,105,413	-				+1.0
2,105,413	-				+1.7
2,105,413	-				+0.6
2,105,413	-				+0.3
2,105,413	-				-0.2
2,105,413	-				-0.6
2,105,413	-				+0.3
2,105,413	-				+0.3
2,105,443	+				+2.1
2,105,443	+				-0.5
2,105,443	+				+1.3
2,105,444	-				-0.2
2,105,689	+				-0.2