Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2002

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,101,163	+				-2.3
2,101,163	+				-0.6
2,101,163	+				-2.3
2,101,163	+				-0.3
2,101,163	+				-0.5
2,101,163	+				-1.7
2,101,163	+				-0.1
2,101,163	+				+0.0
2,101,163	+				-1.9
2,101,163	+				+0.2
2,101,163	+				-0.2
2,101,163	+				-1.0
2,101,163	+				-0.5
2,101,163	+				-0.6
2,101,163	+				-0.7
2,101,163	+				-0.3
2,101,163	+				-0.1
2,101,163	+				+0.5
2,101,163	+				-0.3
2,101,163	+				+0.6
2,101,163	+				+0.8
2,101,163	+				-2.0
2,101,163	+				+0.4
2,101,163	+				-0.8
2,101,164	-		Ga0059261_2000	0.10	+1.1
2,101,164	-		Ga0059261_2000	0.10	-0.2
2,101,164	-		Ga0059261_2000	0.10	-1.2
2,101,164	-		Ga0059261_2000	0.10	+0.6
2,101,164	-		Ga0059261_2000	0.10	-1.0
2,101,164	-		Ga0059261_2000	0.10	-1.6
2,101,164	-		Ga0059261_2000	0.10	-0.5
2,101,164	-		Ga0059261_2000	0.10	+1.1
2,101,164	-		Ga0059261_2000	0.10	-0.5
2,101,164	-		Ga0059261_2000	0.10	+0.3
2,101,164	-		Ga0059261_2000	0.10	-1.5
2,101,164	-		Ga0059261_2000	0.10	-1.8
2,101,164	-		Ga0059261_2000	0.10	-0.3
2,101,164	-		Ga0059261_2000	0.10	+1.2
2,101,208	+		Ga0059261_2000	0.17	-0.2
2,101,208	+		Ga0059261_2000	0.17	-0.9
2,101,208	+		Ga0059261_2000	0.17	+1.1
2,101,208	+		Ga0059261_2000	0.17	-0.7
2,101,208	+		Ga0059261_2000	0.17	-0.1
2,101,208	+		Ga0059261_2000	0.17	+1.1
2,101,208	+		Ga0059261_2000	0.17	-0.7
2,101,209	-		Ga0059261_2000	0.17	-0.8
2,101,209	-		Ga0059261_2000	0.17	+0.0
2,101,628	+		Ga0059261_2000	0.82	-0.2
2,101,629	-		Ga0059261_2000	0.82	-0.8
2,101,629	-		Ga0059261_2000	0.82	-0.1
2,102,077	+				-0.3
2,102,077	+				+0.2
2,102,077	+				+0.1
2,102,077	+				-0.5
2,102,077	+				-0.4
2,102,077	+				-0.6
2,102,077	+				-0.1
2,102,078	-				+0.1
2,102,078	-				+0.2
2,102,078	-				-0.0
2,102,078	-				+0.1
2,102,078	-				+0.8
2,102,078	-				-0.2
2,102,078	-				+0.8
2,102,078	-				+0.8
2,102,177	+				-0.6
2,102,177	+				-0.2
2,102,177	+				+0.9
2,102,177	+				-0.2
2,102,177	+				-1.0
2,102,177	+				-0.9
2,102,178	-				+0.5
2,102,178	-				-0.6
2,102,178	-				-1.4
2,102,178	-				+0.8
2,102,178	-				-0.8
2,102,225	+				+1.5
2,102,226	-				-1.3
2,102,279	+				+2.7
2,102,280	-		Ga0059261_2002	0.15	-0.1
2,102,354	+		Ga0059261_2002	0.24	-1.1
2,102,355	-		Ga0059261_2002	0.24	-0.6
2,102,355	-		Ga0059261_2002	0.24	-0.8
2,102,355	-		Ga0059261_2002	0.24	+0.1
2,102,355	-		Ga0059261_2002	0.24	+0.6
2,102,355	-		Ga0059261_2002	0.24	-0.1
2,102,369	+		Ga0059261_2002	0.25	-0.4
2,102,369	+				+0.4
2,102,370	-		Ga0059261_2002	0.25	-0.3
2,102,405	+		Ga0059261_2002	0.29	+0.5
2,102,405	+		Ga0059261_2002	0.29	-0.0
2,102,405	+		Ga0059261_2002	0.29	+1.5
2,102,405	+		Ga0059261_2002	0.29	-0.0
2,102,405	+		Ga0059261_2002	0.29	-1.1
2,102,406	-		Ga0059261_2002	0.29	-2.2
2,102,411	+		Ga0059261_2002	0.30	-1.2
2,102,411	+		Ga0059261_2002	0.30	-0.3
2,102,411	+		Ga0059261_2002	0.30	-1.9
2,102,411	+		Ga0059261_2002	0.30	-0.0
2,102,412	-		Ga0059261_2002	0.30	-0.2
2,102,412	-		Ga0059261_2002	0.30	+1.1
2,102,412	-		Ga0059261_2002	0.30	-0.6
2,102,412	-		Ga0059261_2002	0.30	+0.5
2,102,412	-		Ga0059261_2002	0.30	+0.7
2,102,412	-		Ga0059261_2002	0.30	-0.0
2,102,412	-		Ga0059261_2002	0.30	-0.1
2,102,412	-		Ga0059261_2002	0.30	-0.4
2,103,015	+				-0.1
2,103,015	+				+1.7
2,103,015	+				-0.7
2,103,015	+				-0.6
2,103,015	+				-0.5
2,103,015	+				+0.2
2,103,016	-				+0.2
2,103,016	-				-0.6
2,103,016	-				-0.1
2,103,016	-				-0.4
2,103,016	-				-0.9
2,103,021	-				-0.5
2,103,021	-				-1.6
2,103,021	-				+0.3
2,103,061	+				-0.2
2,103,061	+				-0.2
2,103,061	+				+0.1
2,103,061	+				+0.3
2,103,062	-				+0.4
2,103,062	-				-0.4
2,103,062	-				+0.6
2,103,062	-				+1.1
2,103,062	-				-1.1
2,103,062	-				-0.5
2,103,062	-				+0.0
2,103,157	+				-0.2
2,103,157	+				+0.1
2,103,157	+				-0.7
2,103,157	+				+0.1
2,103,157	+				-0.3
2,103,157	+				-0.2
2,103,158	-				-0.8
2,103,158	-				-0.4
2,103,158	-				-0.5
2,103,158	-				+0.1
2,103,158	-				+0.5
2,103,158	-				+0.9
2,103,158	-				-0.2
2,103,158	-				-0.3
2,103,158	-				+0.2
2,103,166	+				+0.3
2,103,166	+				+0.1
2,103,166	+				-0.1
2,103,166	+				-1.1
2,103,166	+				-0.2
2,103,166	+				-0.5
2,103,166	+				+0.8
2,103,166	+				-0.5
2,103,166	+				-1.1
2,103,166	+				-0.3
2,103,167	-				-1.9
2,103,167	-				-1.4
2,103,167	-				+2.7
2,103,167	-				-0.3
2,103,232	+		Ga0059261_2003	0.20	+0.1
2,103,233	-		Ga0059261_2003	0.20	-0.2
2,103,233	-		Ga0059261_2003	0.20	-0.3
2,103,233	-		Ga0059261_2003	0.20	-0.3
2,103,233	-		Ga0059261_2003	0.20	-1.2
2,103,233	-		Ga0059261_2003	0.20	-0.4
2,103,233	-		Ga0059261_2003	0.20	+1.4
2,103,233	-		Ga0059261_2003	0.20	-0.5
2,103,310	+		Ga0059261_2003	0.34	-0.5
2,103,311	-		Ga0059261_2003	0.34	-0.5
2,103,340	+		Ga0059261_2003	0.40	-0.4
2,103,340	+		Ga0059261_2003	0.40	+0.1
2,103,340	+		Ga0059261_2003	0.40	-0.4
2,103,341	-		Ga0059261_2003	0.40	-0.5
2,103,341	-		Ga0059261_2003	0.40	-0.1
2,103,341	-		Ga0059261_2003	0.40	-0.7
2,103,341	-		Ga0059261_2003	0.40	-0.1
2,103,341	-		Ga0059261_2003	0.40	-1.2
2,103,341	-		Ga0059261_2003	0.40	-0.2
2,103,341	-				-0.5
2,103,388	+		Ga0059261_2003	0.49	-0.0
2,103,388	+		Ga0059261_2003	0.49	-0.1
2,103,388	+		Ga0059261_2003	0.49	-0.0
2,103,389	-		Ga0059261_2003	0.49	-0.7
2,103,389	-		Ga0059261_2003	0.49	-0.3
2,103,389	-		Ga0059261_2003	0.49	-0.7
2,103,575	-		Ga0059261_2003	0.83	+0.1
2,103,575	-		Ga0059261_2003	0.83	+1.4
2,103,642	-				+0.1
2,103,854	+				-0.7
2,103,855	-				-1.5
2,103,867	-				-2.3
2,103,897	+		Ga0059261_2005	0.10	-2.1
2,103,897	+		Ga0059261_2005	0.10	-1.1
2,103,898	-				+2.1
2,103,980	+		Ga0059261_2005	0.19	-1.1
2,103,980	+		Ga0059261_2005	0.19	-1.2
2,103,981	-		Ga0059261_2005	0.19	-2.2
2,104,043	+				-0.5
2,104,043	+		Ga0059261_2005	0.26	-0.7
2,104,043	+		Ga0059261_2005	0.26	-0.5
2,104,044	-		Ga0059261_2005	0.26	-0.5
2,104,044	-		Ga0059261_2005	0.26	-1.5