Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2000

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,100,173	-		Ga0059261_1999	0.37	+0.6
2,100,265	+		Ga0059261_1999	0.44	-0.1
2,100,265	+		Ga0059261_1999	0.44	+1.2
2,100,265	+		Ga0059261_1999	0.44	-0.2
2,100,266	-		Ga0059261_1999	0.44	+0.1
2,100,266	-		Ga0059261_1999	0.44	+0.6
2,100,266	-		Ga0059261_1999	0.44	+1.7
2,100,266	-		Ga0059261_1999	0.44	+0.3
2,100,291	-		Ga0059261_1999	0.45	-0.5
2,100,349	+		Ga0059261_1999	0.50	-0.4
2,100,349	+		Ga0059261_1999	0.50	-0.5
2,100,349	+		Ga0059261_1999	0.50	-0.2
2,100,350	-		Ga0059261_1999	0.50	-0.2
2,100,350	-		Ga0059261_1999	0.50	-0.2
2,100,355	+		Ga0059261_1999	0.50	-0.0
2,100,355	+		Ga0059261_1999	0.50	-0.2
2,100,356	-		Ga0059261_1999	0.50	-0.1
2,100,356	-		Ga0059261_1999	0.50	+0.5
2,100,356	-		Ga0059261_1999	0.50	+0.1
2,100,356	-		Ga0059261_1999	0.50	+0.1
2,100,356	-		Ga0059261_1999	0.50	-0.4
2,100,358	+		Ga0059261_1999	0.50	+0.1
2,100,358	+		Ga0059261_1999	0.50	-0.3
2,100,359	-		Ga0059261_1999	0.50	+0.3
2,100,817	+		Ga0059261_1999	0.83	+0.4
2,100,817	+		Ga0059261_1999	0.83	-0.1
2,100,904	+		Ga0059261_1999	0.89	-0.5
2,100,904	+		Ga0059261_1999	0.89	+0.0
2,100,963	+				-1.7
2,100,963	+				-0.4
2,100,964	-				+0.7
2,100,964	-				+0.8
2,100,967	+				+1.1
2,100,967	+				-0.0
2,100,967	+				+0.4
2,100,967	+				-0.2
2,100,967	+				+0.7
2,100,967	+				-0.6
2,100,968	-				-0.0
2,100,968	-				-0.3
2,100,968	-				+0.4
2,100,968	-				+0.8
2,100,968	-				+0.0
2,100,968	-				-0.5
2,101,048	+				+2.7
2,101,048	+				+0.1
2,101,101	-				-0.7
2,101,163	+				-2.3
2,101,163	+				-0.6
2,101,163	+				-2.3
2,101,163	+				-0.3
2,101,163	+				-0.5
2,101,163	+				-1.7
2,101,163	+				-0.1
2,101,163	+				+0.0
2,101,163	+				-1.9
2,101,163	+				+0.2
2,101,163	+				-0.2
2,101,163	+				-1.0
2,101,163	+				-0.5
2,101,163	+				-0.6
2,101,163	+				-0.7
2,101,163	+				-0.3
2,101,163	+				-0.1
2,101,163	+				+0.5
2,101,163	+				-0.3
2,101,163	+				+0.6
2,101,163	+				+0.8
2,101,163	+				-2.0
2,101,163	+				+0.4
2,101,163	+				-0.8
2,101,164	-		Ga0059261_2000	0.10	+1.1
2,101,164	-		Ga0059261_2000	0.10	-0.2
2,101,164	-		Ga0059261_2000	0.10	-1.2
2,101,164	-		Ga0059261_2000	0.10	+0.6
2,101,164	-		Ga0059261_2000	0.10	-1.0
2,101,164	-		Ga0059261_2000	0.10	-1.6
2,101,164	-		Ga0059261_2000	0.10	-0.5
2,101,164	-		Ga0059261_2000	0.10	+1.1
2,101,164	-		Ga0059261_2000	0.10	-0.5
2,101,164	-		Ga0059261_2000	0.10	+0.3
2,101,164	-		Ga0059261_2000	0.10	-1.5
2,101,164	-		Ga0059261_2000	0.10	-1.8
2,101,164	-		Ga0059261_2000	0.10	-0.3
2,101,164	-		Ga0059261_2000	0.10	+1.2
2,101,208	+		Ga0059261_2000	0.17	-0.2
2,101,208	+		Ga0059261_2000	0.17	-0.9
2,101,208	+		Ga0059261_2000	0.17	+1.1
2,101,208	+		Ga0059261_2000	0.17	-0.7
2,101,208	+		Ga0059261_2000	0.17	-0.1
2,101,208	+		Ga0059261_2000	0.17	+1.1
2,101,208	+		Ga0059261_2000	0.17	-0.7
2,101,209	-		Ga0059261_2000	0.17	-0.8
2,101,209	-		Ga0059261_2000	0.17	+0.0
2,101,628	+		Ga0059261_2000	0.82	-0.2
2,101,629	-		Ga0059261_2000	0.82	-0.8
2,101,629	-		Ga0059261_2000	0.82	-0.1
2,102,077	+				-0.3
2,102,077	+				+0.2
2,102,077	+				+0.1
2,102,077	+				-0.5
2,102,077	+				-0.4
2,102,077	+				-0.6
2,102,077	+				-0.1
2,102,078	-				+0.1
2,102,078	-				+0.2
2,102,078	-				-0.0
2,102,078	-				+0.1
2,102,078	-				+0.8
2,102,078	-				-0.2
2,102,078	-				+0.8
2,102,078	-				+0.8
2,102,177	+				-0.6
2,102,177	+				-0.2
2,102,177	+				+0.9
2,102,177	+				-0.2
2,102,177	+				-1.0
2,102,177	+				-0.9
2,102,178	-				+0.5
2,102,178	-				-0.6
2,102,178	-				-1.4
2,102,178	-				+0.8
2,102,178	-				-0.8
2,102,225	+				+1.5
2,102,226	-				-1.3
2,102,279	+				+2.7
2,102,280	-		Ga0059261_2002	0.15	-0.1
2,102,354	+		Ga0059261_2002	0.24	-1.1
2,102,355	-		Ga0059261_2002	0.24	-0.6
2,102,355	-		Ga0059261_2002	0.24	-0.8
2,102,355	-		Ga0059261_2002	0.24	+0.1
2,102,355	-		Ga0059261_2002	0.24	+0.6
2,102,355	-		Ga0059261_2002	0.24	-0.1
2,102,369	+		Ga0059261_2002	0.25	-0.4
2,102,369	+				+0.4
2,102,370	-		Ga0059261_2002	0.25	-0.3
2,102,405	+		Ga0059261_2002	0.29	+0.5
2,102,405	+		Ga0059261_2002	0.29	-0.0
2,102,405	+		Ga0059261_2002	0.29	+1.5
2,102,405	+		Ga0059261_2002	0.29	-0.0
2,102,405	+		Ga0059261_2002	0.29	-1.1
2,102,406	-		Ga0059261_2002	0.29	-2.2
2,102,411	+		Ga0059261_2002	0.30	-1.2
2,102,411	+		Ga0059261_2002	0.30	-0.3
2,102,411	+		Ga0059261_2002	0.30	-1.9
2,102,411	+		Ga0059261_2002	0.30	-0.0
2,102,412	-		Ga0059261_2002	0.30	-0.2
2,102,412	-		Ga0059261_2002	0.30	+1.1
2,102,412	-		Ga0059261_2002	0.30	-0.6
2,102,412	-		Ga0059261_2002	0.30	+0.5
2,102,412	-		Ga0059261_2002	0.30	+0.7
2,102,412	-		Ga0059261_2002	0.30	-0.0
2,102,412	-		Ga0059261_2002	0.30	-0.1
2,102,412	-		Ga0059261_2002	0.30	-0.4