Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1986

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,089,713	+		Ga0059261_1984	0.67	-0.0
2,089,713	+		Ga0059261_1984	0.67	-0.5
2,089,713	+		Ga0059261_1984	0.67	+0.7
2,089,713	+		Ga0059261_1984	0.67	-0.3
2,089,713	+		Ga0059261_1984	0.67	-1.7
2,089,713	+		Ga0059261_1984	0.67	-0.1
2,089,713	+		Ga0059261_1984	0.67	-0.5
2,089,714	-		Ga0059261_1984	0.67	+1.1
2,089,714	-		Ga0059261_1984	0.67	+0.5
2,089,714	-		Ga0059261_1984	0.67	-0.2
2,089,714	-		Ga0059261_1984	0.67	-2.2
2,089,714	-		Ga0059261_1984	0.67	-0.3
2,089,714	-		Ga0059261_1984	0.67	+0.1
2,089,714	-		Ga0059261_1984	0.67	+0.1
2,089,714	-		Ga0059261_1984	0.67	-0.4
2,089,714	-		Ga0059261_1984	0.67	-0.5
2,089,894	+				-0.1
2,089,894	+				+0.4
2,089,895	-				+1.4
2,089,895	-				-0.1
2,089,895	-				+0.6
2,090,057	+		Ga0059261_1985	0.22	+0.3
2,090,057	+		Ga0059261_1985	0.22	+0.9
2,090,058	-		Ga0059261_1985	0.22	-1.0
2,090,058	-		Ga0059261_1985	0.22	+0.5
2,090,058	-		Ga0059261_1985	0.22	-0.2
2,090,058	-		Ga0059261_1985	0.22	-1.2
2,090,401	+				-0.0
2,090,402	-				+0.1
2,090,402	-				-0.1
2,090,402	-				-1.2
2,090,402	-				-0.2
2,090,487	+				-2.2
2,090,487	+				-0.9
2,090,488	-				+0.1
2,090,488	-				-0.7
2,090,488	-				+0.5
2,090,492	+				-0.5
2,090,492	+				+0.3
2,090,492	+				-1.1
2,090,492	+				+0.4
2,090,492	+				+2.1
2,090,492	+				-0.2
2,090,492	+				-0.1
2,090,492	+				-1.2
2,090,492	+				-0.9
2,090,493	-				+0.2
2,090,493	-				-0.5
2,090,493	-				+1.1
2,090,493	-				+0.1
2,090,493	-				-0.4
2,090,493	-				-0.8
2,090,493	-				+0.4
2,090,493	-				+0.6
2,090,493	-				-0.5
2,090,493	-				+1.1
2,090,493	-				+0.4
2,090,493	-				+0.1
2,090,493	-				+0.0
2,090,493	-				-0.1
2,090,493	-				+0.4
2,090,493	-				+0.5
2,090,493	-				-0.1
2,090,562	+				+0.0
2,090,562	+				-0.8
2,090,562	+				+0.4
2,090,562	+				-0.2
2,090,562	+				+0.1
2,090,562	+				-0.1
2,090,562	+				-0.2
2,090,562	+				-0.2
2,090,562	+				-1.3
2,090,562	+				-0.5
2,090,563	-				+0.3
2,090,563	-				-0.3
2,090,563	-				-0.0
2,090,563	-				-0.9
2,090,563	-				+1.5
2,090,563	-				-0.2
2,090,574	+				-2.2
2,090,575	-				+0.0
2,090,575	-				-0.1
2,090,575	-				-0.1
2,090,979	+		Ga0059261_1986	0.32	+0.9
2,090,979	+		Ga0059261_1986	0.32	-0.1
2,090,979	+		Ga0059261_1986	0.32	-1.9
2,090,979	+		Ga0059261_1986	0.32	-0.1
2,090,980	-		Ga0059261_1986	0.32	-0.9
2,090,980	-		Ga0059261_1986	0.32	-0.7
2,090,980	-		Ga0059261_1986	0.32	+0.2
2,090,980	-		Ga0059261_1986	0.32	+0.4
2,091,369	+		Ga0059261_1986	0.62	+1.1
2,091,370	-		Ga0059261_1986	0.62	+0.9
2,091,370	-		Ga0059261_1986	0.62	-1.7
2,091,370	-		Ga0059261_1986	0.62	+0.6
2,091,370	-		Ga0059261_1986	0.62	-0.3
2,091,403	-		Ga0059261_1986	0.64	-0.4
2,091,403	-		Ga0059261_1986	0.64	-0.2
2,091,403	-		Ga0059261_1986	0.64	+0.1
2,091,494	-		Ga0059261_1986	0.71	-0.6
2,091,642	+		Ga0059261_1986	0.83	-0.7
2,091,642	+		Ga0059261_1986	0.83	-0.6
2,091,643	-		Ga0059261_1986	0.83	+0.5
2,091,643	-		Ga0059261_1986	0.83	-1.1
2,091,643	-				-0.9
2,091,643	-		Ga0059261_1986	0.83	+0.5
2,091,645	+		Ga0059261_1986	0.83	+1.1
2,091,645	+				+2.1
2,091,645	+		Ga0059261_1986	0.83	-1.2
2,091,646	-		Ga0059261_1986	0.83	-1.5
2,091,672	+		Ga0059261_1986	0.85	+0.3
2,091,673	-		Ga0059261_1986	0.85	-1.3
2,091,673	-		Ga0059261_1986	0.85	-1.3
2,091,673	-		Ga0059261_1986	0.85	-1.7
2,091,673	-		Ga0059261_1986	0.85	-0.6
2,091,753	+				-0.5
2,091,792	-				-0.5
2,092,365	+				-2.3
2,092,365	+				-0.7
2,092,365	+				-2.1
2,092,366	-				+0.8
2,092,388	+				-0.9
2,092,389	-				-0.7
2,092,389	-				-1.8
2,092,389	-				+0.7
2,092,389	-				-0.2
2,092,389	-				+0.5
2,092,408	+				-0.5
2,092,408	+				-0.1
2,092,408	+				-0.1
2,092,409	-				+0.6
2,092,409	-				+0.2
2,092,561	+		Ga0059261_1988	0.29	+0.1
2,092,561	+		Ga0059261_1988	0.29	-1.0
2,092,706	+		Ga0059261_1988	0.60	+0.1
2,092,706	+		Ga0059261_1988	0.60	-1.3
2,092,706	+		Ga0059261_1988	0.60	+2.7
2,092,706	+		Ga0059261_1988	0.60	-0.2
2,092,706	+		Ga0059261_1988	0.60	-0.2
2,092,706	+		Ga0059261_1988	0.60	+0.5
2,092,706	+		Ga0059261_1988	0.60	-0.5
2,092,706	+		Ga0059261_1988	0.60	+0.4
2,092,706	+		Ga0059261_1988	0.60	+0.5
2,092,706	+		Ga0059261_1988	0.60	+0.5
2,092,706	+		Ga0059261_1988	0.60	-0.3
2,092,706	+		Ga0059261_1988	0.60	-0.9
2,092,706	+		Ga0059261_1988	0.60	-1.1
2,092,707	-		Ga0059261_1988	0.60	-1.2
2,092,707	-		Ga0059261_1988	0.60	-0.7
2,092,707	-		Ga0059261_1988	0.60	+0.9
2,092,707	-		Ga0059261_1988	0.60	+0.4
2,092,707	-		Ga0059261_1988	0.60	-0.7
2,092,832	+		Ga0059261_1988	0.87	+0.2
2,092,833	-		Ga0059261_1988	0.87	-0.1