Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1869

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,979,246	+		Ga0059261_1867	0.57	-0.5
1,979,247	-		Ga0059261_1867	0.58	-1.3
1,979,267	-		Ga0059261_1867	0.60	+0.7
1,979,268	+		Ga0059261_1867	0.60	-0.6
1,979,268	+		Ga0059261_1867	0.60	-0.1
1,979,268	+		Ga0059261_1867	0.60	+0.7
1,979,268	+		Ga0059261_1867	0.60	+0.2
1,979,268	+		Ga0059261_1867	0.60	+0.7
1,979,269	-		Ga0059261_1867	0.60	-0.6
1,979,269	-		Ga0059261_1867	0.60	+0.5
1,979,269	-		Ga0059261_1867	0.60	+0.1
1,979,269	-		Ga0059261_1867	0.60	+0.6
1,979,269	-		Ga0059261_1867	0.60	+0.5
1,979,269	-		Ga0059261_1867	0.60	-0.5
1,979,269	-		Ga0059261_1867	0.60	+1.4
1,979,269	-				+1.7
1,979,275	+		Ga0059261_1867	0.61	+1.0
1,979,276	-		Ga0059261_1867	0.61	+1.0
1,979,276	-		Ga0059261_1867	0.61	-1.0
1,979,276	-		Ga0059261_1867	0.61	+1.1
1,979,276	-		Ga0059261_1867	0.61	-0.2
1,979,391	+		Ga0059261_1867	0.74	-0.2
1,979,392	-		Ga0059261_1867	0.75	-0.4
1,979,392	-		Ga0059261_1867	0.75	+2.3
1,979,392	-		Ga0059261_1867	0.75	+1.4
1,979,392	-		Ga0059261_1867	0.75	+0.0
1,979,392	-		Ga0059261_1867	0.75	-0.9
1,979,392	-		Ga0059261_1867	0.75	-0.2
1,979,472	-		Ga0059261_1867	0.84	-0.5
1,979,475	+		Ga0059261_1867	0.84	+0.6
1,979,570	+				+0.4
1,979,570	+				-1.0
1,979,570	+				+0.4
1,979,985	+				+1.1
1,979,985	+		Ga0059261_1868	0.62	-0.2
1,979,985	+		Ga0059261_1868	0.62	+0.4
1,979,986	-		Ga0059261_1868	0.62	-1.7
1,979,986	-		Ga0059261_1868	0.62	-1.0
1,979,986	-		Ga0059261_1868	0.62	-1.2
1,980,242	+				-1.6
1,980,242	+				-1.0
1,980,242	+				-0.7
1,980,242	+				-2.0
1,980,242	+				-1.1
1,980,243	-				+0.0
1,980,243	-				-0.6
1,980,243	-				+1.1
1,980,243	-				+0.1
1,980,636	+		Ga0059261_1869	0.42	-2.8
1,980,637	-		Ga0059261_1869	0.43	-0.5
1,980,909	+		Ga0059261_1869	0.71	-0.8
1,980,909	+		Ga0059261_1869	0.71	-1.5
1,980,910	-		Ga0059261_1869	0.71	-3.2
1,980,912	+		Ga0059261_1869	0.71	-1.0
1,980,912	+		Ga0059261_1869	0.71	-0.9
1,980,912	+		Ga0059261_1869	0.71	-0.6
1,980,912	+		Ga0059261_1869	0.71	-1.2
1,980,913	-		Ga0059261_1869	0.71	-0.8
1,981,079	+		Ga0059261_1869	0.88	-0.8
1,981,079	+		Ga0059261_1869	0.88	-2.0
1,981,080	-		Ga0059261_1869	0.88	-0.5
1,981,080	-		Ga0059261_1869	0.88	-1.4
1,981,153	+				-2.2
1,981,154	-				+1.2
1,981,154	-				-0.5
1,981,196	+				-0.6
1,981,196	+				-2.1
1,981,196	+				-1.1
1,981,196	+				-0.2
1,981,196	+				-0.3
1,981,196	+				-1.6
1,981,197	-				-0.5
1,981,197	-				-1.2
1,981,197	-				-0.1
1,981,197	-				-0.6
1,981,197	-				-0.4
1,981,197	-				-0.3
1,981,197	-				-0.7
1,981,197	-				-0.8
1,981,197	-				+1.8
1,981,271	-				+0.4
1,981,271	-				-1.7
1,981,271	-				-1.5
1,981,372	+				-1.2
1,981,372	+		Ga0059261_1870	0.21	-1.4
1,981,372	+		Ga0059261_1870	0.21	-1.6
1,981,372	+				+2.1
1,981,372	+		Ga0059261_1870	0.21	+0.3
1,981,372	+		Ga0059261_1870	0.21	-0.3
1,981,372	+		Ga0059261_1870	0.21	-0.5
1,981,373	-		Ga0059261_1870	0.21	-0.4
1,981,373	-		Ga0059261_1870	0.21	-1.5
1,981,373	-		Ga0059261_1870	0.21	-1.4
1,981,373	-		Ga0059261_1870	0.21	-1.6
1,981,373	-		Ga0059261_1870	0.21	-2.0
1,981,373	-		Ga0059261_1870	0.21	+2.1
1,981,576	+		Ga0059261_1870	0.45	-0.5
1,981,577	-		Ga0059261_1870	0.45	-1.2
1,981,577	-		Ga0059261_1870	0.45	-0.4
1,981,621	+		Ga0059261_1870	0.51	-1.8
1,981,621	+		Ga0059261_1870	0.51	-1.1
1,981,621	+		Ga0059261_1870	0.51	-0.5
1,981,621	+		Ga0059261_1870	0.51	-1.7
1,981,621	+				+1.1
1,981,622	-		Ga0059261_1870	0.51	-1.9
1,981,776	-		Ga0059261_1870	0.70	-1.9
1,982,160	+		Ga0059261_1871	0.12	-1.0
1,982,160	+		Ga0059261_1871	0.12	-0.1
1,982,160	+		Ga0059261_1871	0.12	-0.3
1,982,161	-		Ga0059261_1871	0.12	-0.6
1,982,161	-		Ga0059261_1871	0.12	-1.2
1,982,161	-		Ga0059261_1871	0.12	-0.5
1,982,161	-		Ga0059261_1871	0.12	-1.2