Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1696

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,800,258	+		Ga0059261_1694	0.69	-1.8
1,800,258	+		Ga0059261_1694	0.69	-0.3
1,800,258	+		Ga0059261_1694	0.69	-1.4
1,800,258	+		Ga0059261_1694	0.69	+0.1
1,800,258	+		Ga0059261_1694	0.69	-0.4
1,800,258	+		Ga0059261_1694	0.69	+0.1
1,800,258	+		Ga0059261_1694	0.69	+0.4
1,800,258	+		Ga0059261_1694	0.69	+0.8
1,800,258	+		Ga0059261_1694	0.69	+0.6
1,800,258	+		Ga0059261_1694	0.69	-0.3
1,800,259	-		Ga0059261_1694	0.69	+0.7
1,800,259	-		Ga0059261_1694	0.69	-0.2
1,800,259	-		Ga0059261_1694	0.69	+0.3
1,800,259	-		Ga0059261_1694	0.69	+0.2
1,800,259	-		Ga0059261_1694	0.69	-0.9
1,800,259	-		Ga0059261_1694	0.69	-0.3
1,800,259	-		Ga0059261_1694	0.69	-0.1
1,800,259	-		Ga0059261_1694	0.69	-0.2
1,800,259	-		Ga0059261_1694	0.69	-0.5
1,800,259	-		Ga0059261_1694	0.69	+0.6
1,800,259	-		Ga0059261_1694	0.69	-0.0
1,800,461	+		Ga0059261_1694	0.84	-0.2
1,800,461	+		Ga0059261_1694	0.84	+0.2
1,800,462	-		Ga0059261_1694	0.84	-0.7
1,800,462	-		Ga0059261_1694	0.84	+0.3
1,800,481	-		Ga0059261_1694	0.85	+1.1
1,800,547	-				+1.1
1,800,555	+				-0.1
1,800,556	-				-0.4
1,800,556	-				+0.4
1,800,640	+				-0.5
1,800,640	+				-0.1
1,800,640	+				+1.1
1,800,640	+				-0.2
1,800,640	+				-0.4
1,800,640	+				-0.5
1,800,640	+				+0.8
1,800,640	+				+0.1
1,800,640	+				+0.3
1,800,640	+				-0.5
1,800,640	+				+0.2
1,800,640	+				+0.2
1,800,640	+				+0.2
1,800,641	-				+0.9
1,800,641	-				+0.4
1,800,641	-				-0.5
1,800,641	-				+0.1
1,800,641	-				+1.6
1,800,641	-				-0.4
1,800,641	-				-0.5
1,800,641	-				-0.4
1,800,641	-				-0.4
1,800,641	-				-0.6
1,800,641	-				+0.5
1,800,641	-				-0.3
1,800,641	-				-0.2
1,800,641	-				-0.2
1,800,641	-				+0.2
1,800,641	-				+0.1
1,800,641	-				+0.2
1,800,641	-				-0.3
1,800,642	+				-0.1
1,800,642	+				+1.1
1,800,642	+				-0.9
1,800,642	+				-0.4
1,800,642	+				+0.5
1,800,642	+				-1.4
1,800,642	+				+1.1
1,800,643	-				-0.4
1,800,643	-				+0.1
1,800,643	-				+0.6
1,800,643	-				+0.4
1,800,643	-				+1.1
1,800,721	-				-0.7
1,800,738	+				-0.7
1,800,738	+				-1.1
1,800,805	+		Ga0059261_1695	0.12	-0.3
1,800,805	+		Ga0059261_1695	0.12	-0.3
1,800,805	+		Ga0059261_1695	0.12	+0.5
1,800,805	+		Ga0059261_1695	0.12	-0.0
1,800,805	+		Ga0059261_1695	0.12	-0.1
1,800,805	+				+1.1
1,800,806	-		Ga0059261_1695	0.12	-0.5
1,800,806	-		Ga0059261_1695	0.12	+0.0
1,800,806	-		Ga0059261_1695	0.12	-0.3
1,800,806	-		Ga0059261_1695	0.12	-0.1
1,800,806	-		Ga0059261_1695	0.12	+0.3
1,800,806	-		Ga0059261_1695	0.12	+0.2
1,800,806	-		Ga0059261_1695	0.12	-0.3
1,800,806	-		Ga0059261_1695	0.12	+0.1
1,800,806	-		Ga0059261_1695	0.12	-0.9
1,800,806	-		Ga0059261_1695	0.12	+0.2
1,800,856	+		Ga0059261_1695	0.23	-0.1
1,800,894	+		Ga0059261_1695	0.32	-0.5
1,800,894	+		Ga0059261_1695	0.32	-0.1
1,800,894	+		Ga0059261_1695	0.32	-0.4
1,800,895	-		Ga0059261_1695	0.32	-0.8
1,800,895	-		Ga0059261_1695	0.32	-1.0
1,800,917	-		Ga0059261_1695	0.37	-0.2
1,801,195	+				+2.6
1,801,195	+				+0.1
1,801,195	+				+0.8
1,801,195	+				-0.2
1,801,196	-				+0.8
1,801,196	-				-0.3
1,801,196	-				-0.7
1,801,196	-				+0.1
1,801,196	-				+0.1
1,801,196	-				-0.5
1,801,196	-				+0.2
1,801,237	+				-0.4
1,801,237	+				-0.1
1,801,237	+				-0.3
1,801,237	+				-1.9
1,801,237	+				-0.1
1,801,238	-				-0.9
1,801,351	+				-1.3
1,801,351	+				-1.9
1,801,378	+		Ga0059261_1696	0.12	-0.8
1,801,378	+		Ga0059261_1696	0.12	-1.6
1,801,532	-		Ga0059261_1696	0.25	-1.3
1,801,690	+		Ga0059261_1696	0.38	-0.7
1,801,691	-		Ga0059261_1696	0.38	-1.3
1,801,715	+		Ga0059261_1696	0.40	+0.6
1,801,715	+		Ga0059261_1696	0.40	-0.7
1,801,716	-		Ga0059261_1696	0.40	+0.1
1,801,745	+		Ga0059261_1696	0.42	-2.5
1,801,746	-		Ga0059261_1696	0.42	-1.5
1,801,955	+		Ga0059261_1696	0.59	-0.5
1,802,083	+		Ga0059261_1696	0.70	-0.9
1,802,084	-		Ga0059261_1696	0.70	-1.7
1,802,084	-				+1.1
1,802,176	+		Ga0059261_1696	0.77	-0.9
1,802,176	+		Ga0059261_1696	0.77	-0.5
1,802,177	-		Ga0059261_1696	0.77	-0.3
1,802,177	-		Ga0059261_1696	0.77	+0.1
1,802,179	+		Ga0059261_1696	0.77	-1.7
1,802,179	+		Ga0059261_1696	0.77	-1.3
1,802,179	+		Ga0059261_1696	0.77	-0.3
1,802,179	+				-0.9
1,802,179	+		Ga0059261_1696	0.77	-1.5
1,802,180	-		Ga0059261_1696	0.78	-1.3
1,802,180	-		Ga0059261_1696	0.78	-1.5
1,802,212	+		Ga0059261_1696	0.80	-0.5
1,802,212	+				-1.3
1,802,212	+		Ga0059261_1696	0.80	+0.1
1,802,213	-		Ga0059261_1696	0.80	+0.3
1,802,305	+		Ga0059261_1696	0.88	+0.1
1,802,360	-				-1.5
1,802,360	-				-1.5
1,802,744	-				+0.1
1,802,828	-				+0.5
1,802,828	-				-2.1
1,802,869	+				-0.4
1,802,869	+				+0.1
1,802,869	+				-0.4
1,802,869	+				+0.8
1,802,869	+				+0.5
1,802,869	+				-0.3
1,802,869	+				-0.4
1,802,870	-				-0.2
1,802,870	-				-0.0
1,802,870	-				-0.5
1,802,870	-				-0.1
1,802,870	-				+0.5
1,802,870	-				+1.6
1,802,870	-				-0.3
1,802,870	-				-0.1
1,802,870	-				+0.1
1,802,870	-				-0.4
1,802,870	-				+0.5
1,802,870	-				-0.3
1,803,075	+				-0.2
1,803,075	+				+2.1
1,803,076	-				-0.7
1,803,076	-				+0.9
1,803,076	-				+0.3
1,803,395	+		Ga0059261_1697	0.21	-0.2