Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1563

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,633,657	-		Ga0059261_1561	0.86	-0.9
1,633,657	-		Ga0059261_1561	0.86	-1.2
1,633,657	-		Ga0059261_1561	0.86	+1.0
1,633,657	-		Ga0059261_1561	0.86	-0.9
1,633,657	-		Ga0059261_1561	0.86	-0.0
1,633,694	-		Ga0059261_1561	0.89	+0.0
1,633,709	+				-2.3
1,633,709	+				-1.7
1,633,709	+				-0.1
1,633,710	-				+0.3
1,633,710	-				-0.2
1,633,713	+				-1.1
1,633,713	+				-1.6
1,633,714	-				-0.4
1,633,714	-				-1.0
1,633,714	-				-0.7
1,633,890	-				-0.8
1,633,911	+		Ga0059261_1562	0.11	-0.6
1,633,911	+		Ga0059261_1562	0.11	-2.5
1,633,911	+		Ga0059261_1562	0.11	-1.5
1,633,912	-		Ga0059261_1562	0.11	-1.6
1,634,045	+		Ga0059261_1562	0.29	-2.0
1,634,045	+		Ga0059261_1562	0.29	-0.1
1,634,059	-		Ga0059261_1562	0.31	-0.1
1,634,150	+		Ga0059261_1562	0.44	-1.9
1,634,151	-		Ga0059261_1562	0.44	-0.9
1,634,195	+		Ga0059261_1562	0.50	-0.8
1,634,351	+		Ga0059261_1562	0.72	-1.4
1,634,351	+		Ga0059261_1562	0.72	-2.0
1,634,352	-		Ga0059261_1562	0.72	-0.8
1,634,352	-		Ga0059261_1562	0.72	+0.2
1,634,352	-		Ga0059261_1562	0.72	-1.1
1,634,352	-		Ga0059261_1562	0.72	-1.1
1,634,352	-		Ga0059261_1562	0.72	-0.8
1,634,656	-		Ga0059261_1563	0.29	-0.8
1,634,846	+		Ga0059261_1563	0.79	-0.7
1,634,846	+		Ga0059261_1563	0.79	-0.6
1,634,847	-		Ga0059261_1563	0.79	+0.0
1,634,944	+				-0.7
1,634,945	-				+2.0
1,634,945	-				-2.4
1,634,945	-				-0.1
1,635,187	+		Ga0059261_1564	0.42	-1.3
1,635,187	+		Ga0059261_1564	0.42	-2.0
1,635,188	-		Ga0059261_1564	0.42	-2.4
1,635,292	+		Ga0059261_1564	0.59	-0.7
1,635,293	-		Ga0059261_1564	0.59	+1.0
1,635,293	-		Ga0059261_1564	0.59	-0.3
1,635,293	-		Ga0059261_1564	0.59	-1.0
1,635,293	-		Ga0059261_1564	0.59	-1.0
1,635,293	-		Ga0059261_1564	0.59	-1.0
1,635,293	-		Ga0059261_1564	0.59	+0.0
1,635,379	+				-0.6
1,635,380	-		Ga0059261_1564	0.73	-0.6
1,635,401	-		Ga0059261_1564	0.76	-0.2
1,635,445	+		Ga0059261_1564	0.83	-2.2
1,635,446	-		Ga0059261_1564	0.83	-1.2
1,635,446	-		Ga0059261_1564	0.83	-1.3
1,635,446	-		Ga0059261_1564	0.83	-1.6
1,635,470	+		Ga0059261_1564	0.87	-1.6
1,635,471	-		Ga0059261_1564	0.87	-1.3
1,635,505	+				-1.0
1,635,506	-				-0.9
1,635,638	+				-1.1
1,635,639	-				-2.1
1,635,639	-				-0.7
1,635,639	-				-0.6
1,635,639	-				-0.6
1,635,639	-				-0.3
1,635,639	-				-0.7
1,635,639	-				-1.3
1,635,639	-				-0.9
1,635,654	-				-1.8
1,635,780	+		Ga0059261_1565	0.11	-1.3
1,635,780	+		Ga0059261_1565	0.11	-0.6
1,635,780	+		Ga0059261_1565	0.11	+0.0
1,635,781	-		Ga0059261_1565	0.11	-0.6
1,635,781	-		Ga0059261_1565	0.11	-0.2
1,635,781	-		Ga0059261_1565	0.11	-3.5
1,635,781	-		Ga0059261_1565	0.11	-2.1
1,635,819	+				+1.0
1,635,819	+		Ga0059261_1565	0.13	-1.4
1,635,820	-		Ga0059261_1565	0.13	-0.8
1,635,820	-		Ga0059261_1565	0.13	-0.2
1,635,832	-		Ga0059261_1565	0.14	-1.5
1,635,832	-		Ga0059261_1565	0.14	-0.1
1,635,832	-		Ga0059261_1565	0.14	-0.6
1,635,832	-		Ga0059261_1565	0.14	-1.0
1,635,832	-		Ga0059261_1565	0.14	-0.3
1,635,836	+		Ga0059261_1565	0.14	-1.4
1,635,837	-				-0.6
1,635,882	-		Ga0059261_1565	0.16	-2.2
1,635,882	-		Ga0059261_1565	0.16	-0.1