Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1561

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,631,671	+				+0.3
1,631,672	-				-0.1
1,631,672	-				-0.0
1,631,672	-				+0.4
1,632,236	+		Ga0059261_1560	0.43	-3.1
1,632,236	+				+2.6
1,632,236	+		Ga0059261_1560	0.43	-0.2
1,632,236	+		Ga0059261_1560	0.43	-0.9
1,632,237	-		Ga0059261_1560	0.44	-3.1
1,632,288	-		Ga0059261_1560	0.53	-2.0
1,633,378	-		Ga0059261_1561	0.65	+0.5
1,633,378	-		Ga0059261_1561	0.65	-1.5
1,633,387	+		Ga0059261_1561	0.65	-2.4
1,633,387	+				+0.0
1,633,387	+		Ga0059261_1561	0.65	-0.8
1,633,387	+		Ga0059261_1561	0.65	-3.8
1,633,388	-		Ga0059261_1561	0.65	-0.6
1,633,388	-		Ga0059261_1561	0.65	+0.0
1,633,388	-		Ga0059261_1561	0.65	+0.0
1,633,388	-		Ga0059261_1561	0.65	+0.2
1,633,388	-		Ga0059261_1561	0.65	+0.5
1,633,388	-		Ga0059261_1561	0.65	-0.4
1,633,489	+		Ga0059261_1561	0.73	-2.0
1,633,490	-		Ga0059261_1561	0.73	+0.6
1,633,528	+		Ga0059261_1561	0.76	-0.7
1,633,529	-		Ga0059261_1561	0.76	+0.0
1,633,529	-		Ga0059261_1561	0.76	-0.4
1,633,529	-		Ga0059261_1561	0.76	-1.1
1,633,541	+		Ga0059261_1561	0.77	-1.6
1,633,657	-		Ga0059261_1561	0.86	-0.9
1,633,657	-		Ga0059261_1561	0.86	-1.2
1,633,657	-		Ga0059261_1561	0.86	+1.0
1,633,657	-		Ga0059261_1561	0.86	-0.9
1,633,657	-		Ga0059261_1561	0.86	-0.0
1,633,694	-		Ga0059261_1561	0.89	+0.0
1,633,709	+				-2.3
1,633,709	+				-1.7
1,633,709	+				-0.1
1,633,710	-				+0.3
1,633,710	-				-0.2
1,633,713	+				-1.1
1,633,713	+				-1.6
1,633,714	-				-0.4
1,633,714	-				-1.0
1,633,714	-				-0.7
1,633,890	-				-0.8
1,633,911	+		Ga0059261_1562	0.11	-0.6
1,633,911	+		Ga0059261_1562	0.11	-2.5
1,633,911	+		Ga0059261_1562	0.11	-1.5
1,633,912	-		Ga0059261_1562	0.11	-1.6
1,634,045	+		Ga0059261_1562	0.29	-2.0
1,634,045	+		Ga0059261_1562	0.29	-0.1
1,634,059	-		Ga0059261_1562	0.31	-0.1
1,634,150	+		Ga0059261_1562	0.44	-1.9
1,634,151	-		Ga0059261_1562	0.44	-0.9
1,634,195	+		Ga0059261_1562	0.50	-0.8
1,634,351	+		Ga0059261_1562	0.72	-1.4
1,634,351	+		Ga0059261_1562	0.72	-2.0
1,634,352	-		Ga0059261_1562	0.72	-0.8
1,634,352	-		Ga0059261_1562	0.72	+0.2
1,634,352	-		Ga0059261_1562	0.72	-1.1
1,634,352	-		Ga0059261_1562	0.72	-1.1
1,634,352	-		Ga0059261_1562	0.72	-0.8
1,634,656	-		Ga0059261_1563	0.29	-0.8