Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1408

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,483,683	-		Ga0059261_1407	0.51	-1.2
1,483,683	-		Ga0059261_1407	0.51	+0.1
1,483,857	+		Ga0059261_1407	0.65	-0.1
1,483,857	+		Ga0059261_1407	0.65	-1.8
1,483,857	+		Ga0059261_1407	0.65	-0.4
1,483,857	+		Ga0059261_1407	0.65	+0.3
1,483,857	+		Ga0059261_1407	0.65	+0.5
1,483,857	+		Ga0059261_1407	0.65	+0.7
1,483,858	-		Ga0059261_1407	0.66	+0.3
1,483,858	-		Ga0059261_1407	0.66	-0.5
1,483,858	-		Ga0059261_1407	0.66	+0.0
1,483,858	-		Ga0059261_1407	0.66	-0.7
1,483,858	-		Ga0059261_1407	0.66	+0.5
1,483,922	+		Ga0059261_1407	0.71	+0.1
1,483,922	+		Ga0059261_1407	0.71	-0.9
1,483,922	+		Ga0059261_1407	0.71	+0.8
1,483,923	-		Ga0059261_1407	0.71	+0.2
1,483,923	-		Ga0059261_1407	0.71	+0.3
1,483,923	-		Ga0059261_1407	0.71	-0.7
1,483,923	-				+1.0
1,483,923	-		Ga0059261_1407	0.71	+0.5
1,484,087	+		Ga0059261_1407	0.85	-0.3
1,484,087	+		Ga0059261_1407	0.85	+0.5
1,484,087	+		Ga0059261_1407	0.85	+0.5
1,484,087	+		Ga0059261_1407	0.85	+0.9
1,484,088	-		Ga0059261_1407	0.85	+0.1
1,484,088	-		Ga0059261_1407	0.85	-0.8
1,484,088	-		Ga0059261_1407	0.85	+0.1
1,484,088	-		Ga0059261_1407	0.85	+0.3
1,484,196	+				+0.0
1,484,196	+				-0.5
1,484,196	+				-0.0
1,484,196	+				-0.1
1,484,196	+				-2.1
1,484,196	+				-0.6
1,484,196	+				-0.3
1,484,196	+				+0.4
1,484,197	-				+0.3
1,484,197	-				-0.1
1,484,197	-				+0.5
1,484,197	-				+0.6
1,484,300	+				-0.7
1,484,300	+				-0.1
1,484,300	+				+0.6
1,484,300	+				+0.5
1,484,300	+				+0.1
1,484,301	-				+0.2
1,484,301	-				-0.1
1,484,301	-				-0.3
1,484,301	-				+0.7
1,484,301	-				+0.0
1,484,301	-				-1.8
1,484,439	+				+0.6
1,484,440	-				-0.4
1,484,440	-				+0.5
1,484,440	-				-0.6
1,484,676	-		Ga0059261_1408	0.64	-0.5
1,484,676	-		Ga0059261_1408	0.64	+0.0
1,484,793	+				+0.6
1,484,793	+				+1.4
1,484,793	+				-0.0
1,484,793	+				+0.2
1,484,794	-				-0.4
1,484,794	-				+0.4
1,484,794	-				-1.3
1,484,807	-				-0.1
1,484,843	+				+0.1
1,484,844	-				-1.1
1,484,844	-				-1.8
1,484,903	+		Ga0059261_1409	0.13	+0.0
1,484,903	+		Ga0059261_1409	0.13	-0.3
1,484,903	+		Ga0059261_1409	0.13	-0.2
1,484,903	+		Ga0059261_1409	0.13	+0.6
1,484,903	+		Ga0059261_1409	0.13	+0.4
1,484,903	+		Ga0059261_1409	0.13	-0.0
1,484,903	+		Ga0059261_1409	0.13	+0.4
1,484,903	+		Ga0059261_1409	0.13	-2.0
1,484,903	+		Ga0059261_1409	0.13	+0.6
1,484,903	+		Ga0059261_1409	0.13	-0.4
1,484,904	-		Ga0059261_1409	0.13	-0.6
1,484,904	-		Ga0059261_1409	0.13	-0.5
1,484,904	-		Ga0059261_1409	0.13	-1.6
1,484,904	-		Ga0059261_1409	0.13	-1.0
1,484,904	-		Ga0059261_1409	0.13	-0.3
1,484,907	+		Ga0059261_1409	0.14	+0.2
1,484,907	+		Ga0059261_1409	0.14	+0.2
1,484,907	+		Ga0059261_1409	0.14	+1.2
1,484,908	-		Ga0059261_1409	0.14	+0.7
1,484,908	-		Ga0059261_1409	0.14	-0.4
1,484,908	-		Ga0059261_1409	0.14	-0.4
1,484,908	-		Ga0059261_1409	0.14	-0.7
1,485,194	+		Ga0059261_1409	0.76	+0.6
1,485,195	-		Ga0059261_1409	0.76	+0.3
1,485,195	-		Ga0059261_1409	0.76	-0.3
1,485,462	-		Ga0059261_1410	0.25	+0.3
1,485,462	-		Ga0059261_1410	0.25	+0.3
1,485,544	+		Ga0059261_1410	0.38	-0.4
1,485,545	-		Ga0059261_1410	0.38	-1.2
1,485,545	-		Ga0059261_1410	0.38	-1.0
1,485,545	-		Ga0059261_1410	0.38	+0.2
1,485,622	+		Ga0059261_1410	0.51	-1.9
1,485,622	+		Ga0059261_1410	0.51	+0.4
1,485,622	+		Ga0059261_1410	0.51	+0.0
1,485,622	+		Ga0059261_1410	0.51	-1.0
1,485,622	+		Ga0059261_1410	0.51	-0.2
1,485,623	-		Ga0059261_1410	0.51	+1.0
1,485,623	-		Ga0059261_1410	0.51	+0.4
1,485,626	-		Ga0059261_1410	0.51	-0.1
1,485,626	-		Ga0059261_1410	0.51	+1.3