Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1382

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,456,249	+		Ga0059261_1381	0.55	+1.7
1,456,249	+		Ga0059261_1381	0.55	+0.2
1,456,250	-		Ga0059261_1381	0.56	-2.0
1,456,271	+		Ga0059261_1381	0.58	-0.7
1,456,272	-		Ga0059261_1381	0.58	+0.3
1,456,283	+		Ga0059261_1381	0.59	-0.2
1,456,369	+		Ga0059261_1381	0.69	-0.2
1,456,466	+		Ga0059261_1381	0.81	-0.5
1,456,466	+		Ga0059261_1381	0.81	-1.1
1,456,467	-		Ga0059261_1381	0.81	+1.0
1,456,467	-		Ga0059261_1381	0.81	+1.2
1,456,500	-		Ga0059261_1381	0.84	+0.5
1,456,527	-		Ga0059261_1381	0.88	+1.4
1,456,601	+				+0.8
1,456,601	+				+0.4
1,456,602	-				+0.3
1,456,686	-				-0.8
1,456,704	+				-0.2
1,456,705	-				+0.0
1,456,705	-				-0.6
1,456,705	-				+0.4
1,456,705	-				-0.3
1,456,705	-				-1.6
1,456,705	-				-1.1
1,456,705	-				-2.5
1,456,718	-				+0.2
1,456,718	-				+0.8
1,456,794	+				-0.2
1,456,800	+				+1.4
1,456,800	+				-1.6
1,456,800	+				+0.0
1,456,800	+				+0.0
1,456,800	+				+0.0
1,456,800	+				+1.0
1,456,801	-				+1.0
1,456,801	-				-2.0
1,456,801	-				-0.9
1,456,801	-				-2.2
1,456,801	-				-1.0
1,456,801	-				-0.2
1,456,801	-				-2.5
1,456,951	+		Ga0059261_1382	0.14	+0.4
1,456,951	+		Ga0059261_1382	0.14	-2.0
1,457,127	+		Ga0059261_1382	0.26	-2.5
1,457,127	+		Ga0059261_1382	0.26	-1.5
1,457,127	+		Ga0059261_1382	0.26	-1.8
1,457,127	+		Ga0059261_1382	0.26	-1.4
1,457,127	+		Ga0059261_1382	0.26	-1.5
1,457,128	-		Ga0059261_1382	0.26	+0.0
1,457,196	-		Ga0059261_1382	0.30	-1.8
1,457,196	-				-1.3
1,457,196	-		Ga0059261_1382	0.30	-0.6
1,457,217	+		Ga0059261_1382	0.31	-1.9
1,457,217	+		Ga0059261_1382	0.31	-1.6
1,457,217	+		Ga0059261_1382	0.31	-2.1
1,457,217	+		Ga0059261_1382	0.31	-0.7
1,457,217	+		Ga0059261_1382	0.31	-2.0
1,457,217	+		Ga0059261_1382	0.31	+0.4
1,457,218	-		Ga0059261_1382	0.31	-1.3
1,457,218	-		Ga0059261_1382	0.31	-0.6
1,457,218	-		Ga0059261_1382	0.31	+1.0
1,457,218	-		Ga0059261_1382	0.31	+1.6
1,457,218	-		Ga0059261_1382	0.31	-1.0
1,457,218	-		Ga0059261_1382	0.31	-0.6
1,457,263	+		Ga0059261_1382	0.34	+0.0
1,457,263	+		Ga0059261_1382	0.34	-0.6
1,457,263	+		Ga0059261_1382	0.34	-1.6
1,457,411	+		Ga0059261_1382	0.44	-0.7
1,457,411	+		Ga0059261_1382	0.44	-1.1
1,457,412	-		Ga0059261_1382	0.44	-2.3
1,457,412	-		Ga0059261_1382	0.44	-0.6
1,457,529	+		Ga0059261_1382	0.51	-1.3
1,457,529	+		Ga0059261_1382	0.51	-0.6
1,457,529	+		Ga0059261_1382	0.51	-0.8
1,457,529	+		Ga0059261_1382	0.51	-0.3
1,457,530	-				+1.0
1,457,530	-		Ga0059261_1382	0.51	+0.0
1,457,530	-		Ga0059261_1382	0.51	-1.3
1,457,530	-		Ga0059261_1382	0.51	-2.2
1,457,530	-		Ga0059261_1382	0.51	-1.0
1,457,635	-		Ga0059261_1382	0.58	+0.4
1,457,689	+		Ga0059261_1382	0.61	+0.0
1,457,815	+		Ga0059261_1382	0.69	-1.3
1,457,816	-		Ga0059261_1382	0.69	+0.0
1,457,816	-		Ga0059261_1382	0.69	-0.9
1,458,171	-				-1.0
1,458,240	+				-0.3
1,458,240	+				-1.9
1,458,240	+				+0.4
1,458,241	-				+1.0
1,458,241	-				-0.6
1,458,270	+				+1.0
1,458,270	+				-0.4
1,458,270	+				-0.1
1,458,270	+				-0.4
1,458,270	+				-0.1
1,458,270	+				+0.2
1,458,271	-				+0.0
1,458,271	-				-1.6
1,458,271	-				+1.0
1,458,294	+				+0.5
1,458,294	+				-0.8
1,458,295	-				+0.0
1,458,295	-				+0.2
1,458,308	-				-0.7
1,458,339	+				-0.2
1,458,355	+				-0.4
1,458,355	+				+0.6
1,458,435	+				-2.0
1,458,435	+				+0.9
1,458,435	+				+1.3
1,458,436	-				+0.3
1,458,436	-				+0.2
1,458,436	-				-0.0
1,458,662	+		Ga0059261_1383	0.17	-0.3
1,458,662	+		Ga0059261_1383	0.17	+0.2
1,458,662	+		Ga0059261_1383	0.17	-0.0
1,458,662	+		Ga0059261_1383	0.17	-0.3
1,458,663	-		Ga0059261_1383	0.18	+0.6
1,458,908	+		Ga0059261_1383	0.32	+0.0
1,458,908	+		Ga0059261_1383	0.32	-0.4
1,458,909	-		Ga0059261_1383	0.32	-1.1
1,458,909	-		Ga0059261_1383	0.32	+0.6
1,459,010	-		Ga0059261_1383	0.38	+0.4
1,459,012	-		Ga0059261_1383	0.38	+0.9
1,459,090	+		Ga0059261_1383	0.43	+0.3
1,459,098	-		Ga0059261_1383	0.44	+0.6
1,459,286	+		Ga0059261_1383	0.55	-0.1
1,459,287	-		Ga0059261_1383	0.55	+0.1
1,459,287	-		Ga0059261_1383	0.55	+0.0
1,459,287	-				+1.0
1,459,287	-		Ga0059261_1383	0.55	+0.6
1,459,287	-		Ga0059261_1383	0.55	+0.4