Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1338 and Ga0059261_1339 overlap by 1 nucleotides Ga0059261_1339 and Ga0059261_1340 are separated by 0 nucleotides Ga0059261_1340 and Ga0059261_1341 are separated by 85 nucleotides
Ga0059261_1338: Ga0059261_1338 - malate dehydrogenase (NAD) (EC 1.1.1.37), at 1,404,278 to 1,405,240
_1338
Ga0059261_1339: Ga0059261_1339 - hypothetical protein, at 1,405,240 to 1,405,836
_1339
Ga0059261_1340: Ga0059261_1340 - succinyl-CoA synthetase, alpha subunit, at 1,405,837 to 1,406,721
_1340
Ga0059261_1341: Ga0059261_1341 - 2-oxoglutarate dehydrogenase, E1 component, at 1,406,807 to 1,409,776
_1341
Position (kb) 1405
1406 Strain fitness (log2 ratio) -1
0
1 at 1405.609 kb on + strand, within Ga0059261_1339 at 1405.749 kb on + strand, within Ga0059261_1339 at 1405.753 kb on + strand, within Ga0059261_1339 at 1405.753 kb on + strand, within Ga0059261_1339 at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.786 kb on + strand at 1405.791 kb on + strand at 1405.791 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 1 mM remove 1,405,609 + Ga0059261_1339 0.62 -1.0 1,405,749 + Ga0059261_1339 0.85 -0.0 1,405,753 + Ga0059261_1339 0.86 -0.6 1,405,753 + Ga0059261_1339 0.86 -0.5 1,405,786 + -0.6 1,405,786 + -0.5 1,405,786 + -1.6 1,405,786 + -0.9 1,405,786 + +0.1 1,405,786 + +0.5 1,405,786 + -0.3 1,405,791 + -1.1 1,405,791 + -0.6
Or see this region's nucleotide sequence