Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1335

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,400,904	-		Ga0059261_1333	0.44	-1.0
1,400,929	+		Ga0059261_1333	0.46	-1.7
1,400,929	+		Ga0059261_1333	0.46	+0.4
1,400,930	-		Ga0059261_1333	0.46	-0.0
1,400,930	-		Ga0059261_1333	0.46	-0.6
1,401,075	+		Ga0059261_1333	0.61	+1.3
1,401,075	+		Ga0059261_1333	0.61	-1.0
1,401,075	+		Ga0059261_1333	0.61	-0.2
1,401,076	-		Ga0059261_1333	0.62	-0.3
1,401,076	-		Ga0059261_1333	0.62	+0.1
1,401,076	-		Ga0059261_1333	0.62	+0.5
1,401,309	+		Ga0059261_1333	0.86	+0.8
1,401,309	+		Ga0059261_1333	0.86	+0.8
1,401,309	+		Ga0059261_1333	0.86	-0.5
1,401,309	+		Ga0059261_1333	0.86	+0.8
1,401,309	+		Ga0059261_1333	0.86	-0.2
1,401,309	+		Ga0059261_1333	0.86	+0.5
1,401,310	-		Ga0059261_1333	0.86	+0.2
1,401,310	-		Ga0059261_1333	0.86	+1.2
1,401,310	-		Ga0059261_1333	0.86	-2.5
1,401,310	-		Ga0059261_1333	0.86	+0.2
1,401,310	-		Ga0059261_1333	0.86	-0.0
1,401,390	+				+1.4
1,401,390	+				-0.1
1,401,390	+				-0.1
1,401,391	-				-0.3
1,401,391	-				-0.4
1,401,391	-				+1.0
1,401,391	-				+0.3
1,401,393	+				+1.7
1,401,393	+				+0.4
1,401,393	+				-0.8
1,401,393	+				-1.0
1,401,393	+				-1.0
1,401,393	+				-0.9
1,401,393	+				+0.0
1,401,393	+				-1.5
1,401,393	+				-0.2
1,401,393	+				-0.5
1,401,394	-				-1.1
1,401,394	-				-1.0
1,401,657	+		Ga0059261_1334	0.47	-0.9
1,401,657	+		Ga0059261_1334	0.47	+0.7
1,401,657	+		Ga0059261_1334	0.47	-0.2
1,401,657	+		Ga0059261_1334	0.47	-0.7
1,401,657	+		Ga0059261_1334	0.47	-0.2
1,401,657	+		Ga0059261_1334	0.47	+0.5
1,401,658	-		Ga0059261_1334	0.47	-0.2
1,401,658	-		Ga0059261_1334	0.47	-0.3
1,401,658	-		Ga0059261_1334	0.47	-0.3
1,401,658	-		Ga0059261_1334	0.47	-1.0
1,401,658	-		Ga0059261_1334	0.47	-0.5
1,401,895	+				-1.2
1,401,895	+				+0.2
1,401,895	+				+0.3
1,401,895	+				-0.5
1,401,895	+				+1.8
1,401,896	-				+0.5
1,401,896	-				+0.7
1,401,896	-				-0.1
1,401,896	-				+0.2
1,401,896	-				+0.1
1,401,896	-				-1.5
1,401,896	-				+0.2
1,401,896	-				+0.2
1,402,034	+		Ga0059261_1335	0.12	-1.2
1,402,034	+		Ga0059261_1335	0.12	-0.6
1,402,035	-		Ga0059261_1335	0.12	-1.0
1,402,081	+		Ga0059261_1335	0.16	+2.0
1,402,081	+		Ga0059261_1335	0.16	-0.8
1,402,081	+				-0.6
1,402,081	+		Ga0059261_1335	0.16	-0.7
1,402,081	+		Ga0059261_1335	0.16	-0.8
1,402,082	-				-0.0
1,402,082	-				-1.3
1,402,082	-		Ga0059261_1335	0.17	-1.0
1,402,409	-		Ga0059261_1335	0.46	-0.5
1,402,409	-		Ga0059261_1335	0.46	-1.2
1,402,601	-		Ga0059261_1335	0.63	-0.3
1,402,742	-		Ga0059261_1335	0.76	-0.6
1,402,853	-		Ga0059261_1335	0.86	-1.0
1,402,853	-		Ga0059261_1335	0.86	-1.3
1,402,853	-		Ga0059261_1335	0.86	-0.0
1,402,941	+				+1.4
1,402,942	-				-1.6
1,402,979	-				+0.0
1,402,979	-				-0.4
1,402,979	-				-0.6
1,402,979	-				-0.7
1,402,979	-				+0.3
1,402,979	-				+0.4
1,403,062	+		Ga0059261_1336	0.14	-0.3
1,403,062	+		Ga0059261_1336	0.14	-0.2
1,403,062	+		Ga0059261_1336	0.14	+0.3
1,403,063	-		Ga0059261_1336	0.14	+0.0
1,403,063	-		Ga0059261_1336	0.14	-0.2
1,403,136	+		Ga0059261_1336	0.27	-0.0
1,403,268	+		Ga0059261_1336	0.49	-0.8
1,403,268	+		Ga0059261_1336	0.49	+0.1
1,403,269	-		Ga0059261_1336	0.49	+0.2
1,403,269	-		Ga0059261_1336	0.49	+0.1
1,403,283	+		Ga0059261_1336	0.52	-0.3
1,403,283	+		Ga0059261_1336	0.52	+0.5
1,403,332	+		Ga0059261_1336	0.60	+0.3
1,403,332	+		Ga0059261_1336	0.60	-0.1
1,403,332	+		Ga0059261_1336	0.60	-1.2
1,403,333	-		Ga0059261_1336	0.60	+0.1
1,403,333	-		Ga0059261_1336	0.60	+0.3
1,403,333	-		Ga0059261_1336	0.60	-1.2
1,403,333	-		Ga0059261_1336	0.60	-0.1
1,403,395	+		Ga0059261_1336	0.70	-1.1
1,403,396	-		Ga0059261_1336	0.71	+0.6
1,403,396	-		Ga0059261_1336	0.71	-0.2
1,403,405	+		Ga0059261_1336	0.72	-0.1
1,403,405	+		Ga0059261_1336	0.72	-0.1
1,403,405	+		Ga0059261_1336	0.72	-0.4
1,403,405	+		Ga0059261_1336	0.72	+1.0
1,403,406	-		Ga0059261_1336	0.72	+0.1
1,403,530	-				-1.1
1,403,580	+				-0.3
1,403,581	-				+1.0
1,403,583	+				-0.7
1,403,585	+				-0.6
1,403,586	-				+0.3
1,403,599	+				+0.4
1,403,599	+				+0.3
1,403,665	+		Ga0059261_1337	0.12	+0.5
1,403,666	-		Ga0059261_1337	0.12	-0.2
1,403,725	+		Ga0059261_1337	0.26	-1.8
1,403,725	+		Ga0059261_1337	0.26	-0.4
1,403,726	-		Ga0059261_1337	0.26	-0.2
1,403,726	-		Ga0059261_1337	0.26	+0.7
1,403,755	+		Ga0059261_1337	0.33	-0.6
1,403,755	+		Ga0059261_1337	0.33	+0.5
1,403,755	+		Ga0059261_1337	0.33	-0.4
1,403,755	+		Ga0059261_1337	0.33	-0.7
1,403,756	-		Ga0059261_1337	0.33	+1.0
1,403,756	-		Ga0059261_1337	0.33	-0.3
1,404,004	+				+1.0
1,404,004	+				-0.5
1,404,005	-				-1.3
1,404,005	-				-0.2
1,404,005	-				-1.3