Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1293

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,353,562	+		Ga0059261_1291	0.49	-0.2
1,353,563	-		Ga0059261_1291	0.49	-0.1
1,353,647	+		Ga0059261_1291	0.66	+0.2
1,353,691	+		Ga0059261_1291	0.75	-0.9
1,353,691	+		Ga0059261_1291	0.75	+1.0
1,353,691	+		Ga0059261_1291	0.75	-0.5
1,353,692	-		Ga0059261_1291	0.75	+0.1
1,353,818	+				-0.1
1,353,901	+				+0.1
1,353,902	-				+0.1
1,353,908	+				+0.1
1,353,909	-				+0.2
1,353,909	-				+0.0
1,353,909	-				-0.4
1,353,911	-				-0.1
1,353,911	-				-1.5
1,353,916	+				-1.1
1,353,916	+				-0.7
1,353,916	+				-1.0
1,353,916	+				-0.6
1,353,916	+				+0.5
1,353,916	+				+1.0
1,353,916	+				+0.7
1,353,917	-				+0.2
1,353,917	-				-0.2
1,353,917	-				-0.3
1,353,917	-				+1.0
1,354,052	+		Ga0059261_1292	0.28	-0.0
1,354,053	-		Ga0059261_1292	0.28	-0.6
1,354,213	+		Ga0059261_1292	0.79	+0.6
1,354,355	+				-0.3
1,354,355	+				-0.5
1,354,355	+				+0.3
1,354,355	+				-0.1
1,354,356	-				-0.6
1,354,356	-				+0.0
1,354,405	+				-0.6
1,354,405	+				-0.4
1,354,406	-				-1.8
1,354,432	+				-0.4
1,354,433	-				-0.9
1,354,433	-				-1.1
1,354,471	+				-1.2
1,354,471	+				+0.1
1,354,471	+				-0.9
1,354,471	+				-0.2
1,354,471	+				+0.3
1,354,471	+				-0.6
1,354,471	+				-0.2
1,354,471	+				-0.5
1,354,471	+				-0.6
1,354,471	+				-0.6
1,354,471	+				+1.0
1,354,472	-				-0.6
1,354,472	-				-1.4
1,354,472	-				-0.2
1,354,472	-				-1.6
1,354,472	-				-2.0
1,354,472	-				-0.8
1,354,472	-				-0.6
1,354,472	-				-0.6
1,354,526	-				-0.7
1,354,646	+		Ga0059261_1293	0.12	+0.1
1,354,646	+		Ga0059261_1293	0.12	+0.8
1,354,647	-		Ga0059261_1293	0.12	-0.3
1,354,647	-		Ga0059261_1293	0.12	+0.5
1,354,647	-		Ga0059261_1293	0.12	-0.3
1,354,647	-		Ga0059261_1293	0.12	-1.2
1,354,647	-		Ga0059261_1293	0.12	-0.0
1,354,647	-		Ga0059261_1293	0.12	-1.0
1,354,647	-		Ga0059261_1293	0.12	-0.3
1,354,839	+		Ga0059261_1293	0.21	-1.0
1,354,839	+		Ga0059261_1293	0.21	-1.3
1,354,839	+		Ga0059261_1293	0.21	-0.7
1,354,840	-		Ga0059261_1293	0.21	+1.8
1,354,840	-		Ga0059261_1293	0.21	-0.7
1,354,840	-		Ga0059261_1293	0.21	-2.9
1,354,887	+		Ga0059261_1293	0.24	+0.6
1,354,887	+		Ga0059261_1293	0.24	-0.5
1,354,888	-		Ga0059261_1293	0.24	+0.1
1,354,888	-		Ga0059261_1293	0.24	-1.2
1,354,888	-		Ga0059261_1293	0.24	-1.5
1,354,891	+		Ga0059261_1293	0.24	-0.0
1,354,891	+		Ga0059261_1293	0.24	-1.0
1,354,891	+		Ga0059261_1293	0.24	-0.2
1,354,892	-		Ga0059261_1293	0.24	-0.8
1,354,892	-		Ga0059261_1293	0.24	-1.5
1,354,921	+		Ga0059261_1293	0.25	-1.0
1,354,921	+		Ga0059261_1293	0.25	-0.6
1,354,921	+		Ga0059261_1293	0.25	+0.1
1,354,922	-		Ga0059261_1293	0.25	-0.1
1,354,979	-		Ga0059261_1293	0.28	-1.1
1,354,979	-		Ga0059261_1293	0.28	-1.3
1,354,979	-		Ga0059261_1293	0.28	-1.0
1,355,116	+		Ga0059261_1293	0.35	-0.3
1,355,117	-		Ga0059261_1293	0.35	-0.6
1,355,117	-		Ga0059261_1293	0.35	-2.2
1,355,117	-		Ga0059261_1293	0.35	-0.6
1,355,117	-		Ga0059261_1293	0.35	-1.1
1,355,131	+		Ga0059261_1293	0.35	-2.5
1,355,275	+		Ga0059261_1293	0.42	+1.6
1,355,275	+		Ga0059261_1293	0.42	-0.9
1,355,275	+		Ga0059261_1293	0.42	-1.3
1,355,275	+		Ga0059261_1293	0.42	+0.1
1,355,275	+		Ga0059261_1293	0.42	-1.0
1,355,275	+		Ga0059261_1293	0.42	-1.5
1,355,276	-		Ga0059261_1293	0.42	-1.8
1,355,276	-		Ga0059261_1293	0.42	-0.2
1,355,276	-		Ga0059261_1293	0.42	-0.6
1,355,276	-		Ga0059261_1293	0.42	-2.6
1,355,276	-		Ga0059261_1293	0.42	-0.6
1,355,276	-		Ga0059261_1293	0.42	-2.7
1,355,276	-		Ga0059261_1293	0.42	-1.2
1,355,277	+		Ga0059261_1293	0.42	+0.6
1,355,278	-		Ga0059261_1293	0.42	-2.1
1,355,278	-		Ga0059261_1293	0.42	-1.5
1,355,278	-		Ga0059261_1293	0.42	+0.3
1,355,278	-		Ga0059261_1293	0.42	-1.3
1,355,278	-		Ga0059261_1293	0.42	-0.0
1,355,278	-		Ga0059261_1293	0.42	-1.3
1,355,319	+		Ga0059261_1293	0.44	-1.5
1,355,319	+		Ga0059261_1293	0.44	+0.8
1,355,319	+		Ga0059261_1293	0.44	+0.3
1,355,319	+		Ga0059261_1293	0.44	-0.7
1,355,319	+		Ga0059261_1293	0.44	-1.1
1,355,320	-		Ga0059261_1293	0.44	-0.2
1,355,320	-		Ga0059261_1293	0.44	+1.0
1,355,320	-		Ga0059261_1293	0.44	-0.3
1,355,416	+		Ga0059261_1293	0.49	-0.3
1,355,416	+				+1.0
1,355,416	+		Ga0059261_1293	0.49	-1.3
1,355,416	+		Ga0059261_1293	0.49	-1.2
1,355,417	-		Ga0059261_1293	0.49	-2.2
1,355,417	-		Ga0059261_1293	0.49	-0.6
1,355,417	-		Ga0059261_1293	0.49	-1.0
1,355,533	+		Ga0059261_1293	0.55	-2.1
1,355,533	+		Ga0059261_1293	0.55	-1.6
1,355,534	-		Ga0059261_1293	0.55	-0.0
1,355,534	-				-1.3
1,355,534	-		Ga0059261_1293	0.55	-0.4
1,355,534	-		Ga0059261_1293	0.55	-2.3
1,355,583	-		Ga0059261_1293	0.57	-0.5
1,355,614	+		Ga0059261_1293	0.58	-0.2
1,355,615	-		Ga0059261_1293	0.59	+0.4
1,355,625	+		Ga0059261_1293	0.59	-1.2
1,355,748	+		Ga0059261_1293	0.65	-0.7
1,355,748	+		Ga0059261_1293	0.65	-0.6
1,355,748	+		Ga0059261_1293	0.65	-0.3
1,355,748	+		Ga0059261_1293	0.65	-1.2
1,355,748	+		Ga0059261_1293	0.65	-0.2
1,355,749	-		Ga0059261_1293	0.65	-1.1
1,355,851	+				-0.6
1,355,851	+		Ga0059261_1293	0.70	-0.0
1,355,852	-		Ga0059261_1293	0.70	+0.2
1,355,852	-		Ga0059261_1293	0.70	-0.0
1,355,852	-		Ga0059261_1293	0.70	-0.0
1,355,852	-		Ga0059261_1293	0.70	-0.6
1,356,511	-				-0.6
1,356,527	-				+0.1
1,356,527	-				+0.2
1,356,527	-				+0.1
1,356,903	-		Ga0059261_1294	0.20	-0.7
1,356,993	-		Ga0059261_1294	0.24	-0.5
1,356,993	-		Ga0059261_1294	0.24	-0.2
1,357,027	+		Ga0059261_1294	0.26	+0.8
1,357,028	-		Ga0059261_1294	0.26	+1.1
1,357,028	-		Ga0059261_1294	0.26	+1.4
1,357,028	-		Ga0059261_1294	0.26	-0.0
1,357,097	+		Ga0059261_1294	0.30	-1.9
1,357,097	+		Ga0059261_1294	0.30	+0.4
1,357,098	-		Ga0059261_1294	0.30	+1.0
1,357,098	-		Ga0059261_1294	0.30	+0.6
1,357,098	-		Ga0059261_1294	0.30	+0.2
1,357,098	-		Ga0059261_1294	0.30	-0.2
1,357,098	-		Ga0059261_1294	0.30	+0.5
1,357,098	-		Ga0059261_1294	0.30	+0.7
1,357,122	+		Ga0059261_1294	0.32	-0.4
1,357,122	+		Ga0059261_1294	0.32	-0.5
1,357,122	+		Ga0059261_1294	0.32	-0.0
1,357,122	+		Ga0059261_1294	0.32	+0.1
1,357,122	+		Ga0059261_1294	0.32	-0.7
1,357,123	-		Ga0059261_1294	0.32	+0.1
1,357,377	+		Ga0059261_1294	0.45	+0.5
1,357,377	+		Ga0059261_1294	0.45	-0.4
1,357,377	+		Ga0059261_1294	0.45	+0.4
1,357,378	-		Ga0059261_1294	0.46	+0.2
1,357,378	-		Ga0059261_1294	0.46	+0.2
1,357,378	-		Ga0059261_1294	0.46	-0.5
1,357,402	+				+2.6
1,357,402	+		Ga0059261_1294	0.47	+0.1
1,357,402	+		Ga0059261_1294	0.47	-0.4
1,357,402	+		Ga0059261_1294	0.47	-0.2
1,357,403	-		Ga0059261_1294	0.47	-0.2
1,357,403	-		Ga0059261_1294	0.47	+0.2
1,357,403	-		Ga0059261_1294	0.47	+1.0
1,357,403	-		Ga0059261_1294	0.47	+0.3
1,357,403	-		Ga0059261_1294	0.47	+0.6
1,357,403	-		Ga0059261_1294	0.47	-0.8
1,357,406	+		Ga0059261_1294	0.47	+0.8
1,357,406	+		Ga0059261_1294	0.47	+1.0
1,357,406	+		Ga0059261_1294	0.47	-0.0
1,357,406	+		Ga0059261_1294	0.47	+0.4
1,357,406	+		Ga0059261_1294	0.47	-0.2
1,357,406	+		Ga0059261_1294	0.47	+0.2
1,357,407	-		Ga0059261_1294	0.47	-0.8
1,357,407	-		Ga0059261_1294	0.47	-0.6
1,357,407	-		Ga0059261_1294	0.47	+0.3
1,357,407	-		Ga0059261_1294	0.47	+0.6
1,357,407	-		Ga0059261_1294	0.47	-0.1
1,357,407	-		Ga0059261_1294	0.47	-0.0
1,357,407	-		Ga0059261_1294	0.47	-0.8
1,357,407	-		Ga0059261_1294	0.47	+0.0
1,357,407	-		Ga0059261_1294	0.47	+0.4
1,357,407	-		Ga0059261_1294	0.47	-0.2
1,357,462	+		Ga0059261_1294	0.50	+0.3
1,357,462	+		Ga0059261_1294	0.50	+0.5
1,357,462	+		Ga0059261_1294	0.50	+0.1
1,357,462	+		Ga0059261_1294	0.50	+0.3
1,357,463	-		Ga0059261_1294	0.50	-0.2
1,357,463	-		Ga0059261_1294	0.50	+1.0