Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1017

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
1,052,630	-		Ga0059261_1015	0.17	+0.7
1,052,743	+		Ga0059261_1015	0.34	-0.1
1,052,743	+		Ga0059261_1015	0.34	+0.1
1,052,743	+		Ga0059261_1015	0.34	+1.2
1,052,743	+		Ga0059261_1015	0.34	-0.6
1,052,744	-		Ga0059261_1015	0.34	+0.0
1,052,744	-		Ga0059261_1015	0.34	-1.2
1,052,744	-		Ga0059261_1015	0.34	-0.2
1,053,027	+		Ga0059261_1015	0.77	+0.3
1,053,029	+		Ga0059261_1015	0.77	+0.3
1,053,072	-		Ga0059261_1015	0.83	-0.4
1,053,079	+		Ga0059261_1015	0.85	-0.4
1,053,079	+				+1.5
1,053,080	-		Ga0059261_1015	0.85	-0.1
1,053,421	+		Ga0059261_1016	0.81	+0.1
1,053,421	+		Ga0059261_1016	0.81	+0.0
1,053,422	-		Ga0059261_1016	0.81	+0.5
1,053,422	-		Ga0059261_1016	0.81	+0.4
1,053,558	+				-0.4
1,053,558	+				-1.0
1,053,650	+		Ga0059261_1017	0.11	-1.1
1,053,650	+		Ga0059261_1017	0.11	-0.2
1,053,651	-		Ga0059261_1017	0.11	-0.4
1,053,712	+		Ga0059261_1017	0.16	+0.4
1,053,712	+		Ga0059261_1017	0.16	-0.1
1,053,713	-		Ga0059261_1017	0.16	-0.4
1,053,713	-		Ga0059261_1017	0.16	-0.3
1,053,713	-		Ga0059261_1017	0.16	-1.4
1,053,713	-		Ga0059261_1017	0.16	-1.3
1,053,713	-		Ga0059261_1017	0.16	-1.1
1,053,713	-		Ga0059261_1017	0.16	+0.9
1,053,713	-		Ga0059261_1017	0.16	-0.9
1,053,814	+		Ga0059261_1017	0.25	-0.9
1,053,815	-		Ga0059261_1017	0.25	-0.5
1,054,174	+		Ga0059261_1017	0.57	+0.7
1,054,174	+				+0.9
1,054,174	+		Ga0059261_1017	0.57	+0.4
1,054,271	-		Ga0059261_1017	0.66	-0.9
1,054,486	+		Ga0059261_1017	0.85	-0.5
1,054,486	+		Ga0059261_1017	0.85	-1.0
1,054,486	+		Ga0059261_1017	0.85	+0.5
1,054,486	+		Ga0059261_1017	0.85	-0.1
1,054,487	-		Ga0059261_1017	0.85	-0.7
1,054,487	-		Ga0059261_1017	0.85	-0.1
1,054,487	-		Ga0059261_1017	0.85	-0.4
1,054,487	-		Ga0059261_1017	0.85	+0.7
1,054,545	+				+1.5
1,054,546	-				-0.8
1,054,546	-				-0.2
1,054,546	-				+0.2
1,054,546	-				-0.5
1,054,558	+				+0.2
1,054,558	+				+0.6
1,054,558	+				+0.5
1,054,559	-				-0.9
1,054,559	-				-0.4
1,054,559	-				-1.1
1,054,635	+				-0.1
1,054,635	+				-0.2
1,054,635	+				-0.2
1,054,636	-				-0.2
1,054,636	-				+0.7
1,054,636	-				+0.9
1,054,636	-				-0.5
1,054,639	+				+1.5
1,054,639	+				+0.1
1,054,639	+				+0.9
1,054,639	+				+0.0
1,054,639	+				-0.1
1,054,639	+				+0.3
1,054,639	+				-0.3
1,054,639	+				+0.7
1,054,639	+				+0.6
1,054,639	+				-1.2
1,054,639	+				+0.3
1,054,639	+				+0.0
1,054,639	+				-0.4
1,054,639	+				-0.8
1,054,640	-				+0.2
1,054,640	-				-0.1
1,054,640	-				+0.1
1,054,640	-				-0.2
1,054,640	-				+0.2
1,054,640	-				+0.3
1,054,640	-				-1.6
1,054,640	-				-1.1
1,054,640	-				+0.2
1,054,640	-				-1.1
1,054,640	-				-0.1
1,054,640	-				+0.2
1,054,640	-				-0.8
1,054,640	-				+0.2
1,054,640	-				-0.4
1,054,642	+				-0.4
1,054,643	-				+0.9
1,054,643	-				+0.0
1,054,643	-				+0.3
1,054,643	-				+0.0
1,054,680	+				+0.2
1,054,680	+				-0.2
1,054,681	-				-0.7
1,054,681	-				-0.2
1,054,681	-				+0.2
1,054,702	-				+0.4
1,054,702	-				+0.4
1,054,887	+		Ga0059261_1018	0.86	-0.3
1,054,887	+		Ga0059261_1018	0.86	+0.3
1,054,887	+		Ga0059261_1018	0.86	-0.3
1,054,887	+		Ga0059261_1018	0.86	+0.0
1,054,887	+		Ga0059261_1018	0.86	-0.7
1,054,887	+		Ga0059261_1018	0.86	-0.4
1,054,887	+		Ga0059261_1018	0.86	-0.8
1,054,888	-		Ga0059261_1018	0.86	+0.2
1,054,888	-		Ga0059261_1018	0.86	-0.7
1,054,888	-		Ga0059261_1018	0.86	+0.2
1,054,968	+				-0.2
1,054,968	+				-0.5
1,055,059	-				+0.4
1,055,059	-				+0.9
1,055,059	-				-1.0
1,055,060	+				+0.1
1,055,094	+				-0.1
1,055,094	+				+0.0
1,055,095	-				+1.0
1,055,142	+				+0.4
1,055,143	-				+0.2
1,055,143	-				-0.2
1,055,143	-				+0.4
1,055,219	+				-1.4
1,055,220	-				-0.4
1,055,274	+		Ga0059261_1019	0.12	+0.3
1,055,275	-		Ga0059261_1019	0.12	-0.8
1,055,301	+		Ga0059261_1019	0.13	+0.6
1,055,302	-		Ga0059261_1019	0.13	-0.1
1,055,302	-		Ga0059261_1019	0.13	+0.3
1,055,302	-		Ga0059261_1019	0.13	-0.2
1,055,310	+		Ga0059261_1019	0.13	+0.8
1,055,310	+		Ga0059261_1019	0.13	+1.3
1,055,310	+		Ga0059261_1019	0.13	-1.2
1,055,311	-		Ga0059261_1019	0.13	-0.5
1,055,460	+		Ga0059261_1019	0.18	-0.6
1,055,460	+		Ga0059261_1019	0.18	-1.1
1,055,460	+		Ga0059261_1019	0.18	+0.5
1,055,461	-		Ga0059261_1019	0.18	+0.2
1,055,475	+		Ga0059261_1019	0.19	-0.4
1,055,475	+		Ga0059261_1019	0.19	+0.5
1,055,475	+		Ga0059261_1019	0.19	+0.6
1,055,476	-		Ga0059261_1019	0.19	+0.4
1,055,476	-		Ga0059261_1019	0.19	+0.2
1,055,476	-		Ga0059261_1019	0.19	-0.7
1,055,476	-		Ga0059261_1019	0.19	-1.0
1,055,476	-		Ga0059261_1019	0.19	-1.2
1,055,476	-		Ga0059261_1019	0.19	+0.6
1,055,481	+		Ga0059261_1019	0.19	+0.2
1,055,481	+		Ga0059261_1019	0.19	-0.5
1,055,481	+		Ga0059261_1019	0.19	+0.3
1,055,481	+		Ga0059261_1019	0.19	+0.7
1,055,481	+		Ga0059261_1019	0.19	+0.2
1,055,482	-		Ga0059261_1019	0.19	-1.0
1,055,482	-		Ga0059261_1019	0.19	+0.2
1,055,482	-		Ga0059261_1019	0.19	+0.4
1,055,482	-		Ga0059261_1019	0.19	-0.2
1,055,482	-		Ga0059261_1019	0.19	-0.1
1,055,482	-		Ga0059261_1019	0.19	-1.9
1,055,482	-		Ga0059261_1019	0.19	+0.8
1,055,482	-		Ga0059261_1019	0.19	-0.5
1,055,482	-		Ga0059261_1019	0.19	+0.1
1,055,500	-		Ga0059261_1019	0.20	+0.1
1,055,500	-		Ga0059261_1019	0.20	-1.1
1,055,592	+		Ga0059261_1019	0.23	-0.2
1,055,592	+		Ga0059261_1019	0.23	-0.4
1,055,592	+		Ga0059261_1019	0.23	-0.4
1,055,592	+		Ga0059261_1019	0.23	-1.2
1,055,592	+		Ga0059261_1019	0.23	-0.1
1,055,593	-		Ga0059261_1019	0.23	+0.2
1,055,593	-		Ga0059261_1019	0.23	+0.1
1,055,593	-		Ga0059261_1019	0.23	+0.3
1,055,596	-		Ga0059261_1019	0.23	-0.5